Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1657
(612 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 25 0.44
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 4.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.1
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 9.5
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 9.5
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 9.5
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 9.5
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 9.5
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 9.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 9.5
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 9.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.5
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 25.4 bits (53), Expect = 0.44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 508 VLHGLKIEYIINHILSSRIK 567
VLHG ++EY+ H L+ +K
Sbjct: 494 VLHGDEVEYVFGHPLNKSLK 513
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -2
Query: 221 LADFCNFKILQFYSFLRA-KYFLDQS*IW 138
+A+ CNFK +SFL Y + IW
Sbjct: 139 MAERCNFKAYCLFSFLNTIVYCVPAGWIW 167
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/23 (30%), Positives = 17/23 (73%)
Frame = +2
Query: 413 EPVCTRPRLPEKSLLN*IYTTLH 481
+PV + + PE+++++ ++TT H
Sbjct: 292 QPVHSAYKAPEETIISSVFTTRH 314
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 12 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKS 125
YK+ ++ N EKL E+ T ++++S
Sbjct: 12 YKEKDRRYEKLYNEKEKLLEERTSRKRYSRS 42
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 234 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 270
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 33 YKQDNQPQMHFINFMEKLTEDYTKHLQFTKSTNSTPN 143
YK+ ++ N EKL E+ T ++++S N
Sbjct: 245 YKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQN 281
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -1
Query: 603 LRLYSYAMIIQLLNARRQYVVNYVF 529
L LY++A ++ N ++Y+V+ +F
Sbjct: 218 LLLYNHARLMSQDNHSKEYLVSIMF 242
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -3
Query: 406 NTRSLLVAISSCFHDGNCKCHNFQRQNL 323
N SL + H GN CH + Q++
Sbjct: 363 NDGSLYLTKVQLIHAGNYTCHAVRNQDV 390
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,568
Number of Sequences: 438
Number of extensions: 3586
Number of successful extensions: 24
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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