Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1645
(624 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 1.8
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 2.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 5.6
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 5.6
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.8
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.8
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 9.8
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 9.8
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 303 Y*YKTI*NDKSNDFTKKYKIVFYCNSLNME 214
Y Y N+ +N++ YK + Y N +N+E
Sbjct: 92 YNYNNNYNNYNNNYNTNYKKLQYYNIINIE 121
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 503 FWSPRELGNGRSPAEVTTVLQFNNNKMIMGTDL 405
FW RE + R +TTVL + + TDL
Sbjct: 266 FWIHREATSDRVGLGITTVLTLSTISLDSRTDL 298
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 351 KITDSINNNI*RAIVFY*YKTI*NDKSNDFTKKYKIVFYCNSLNME 214
KI S++NN Y Y N+ +N++ YK + Y N +N+E
Sbjct: 80 KIISSLSNN-------YKYSNY-NNYNNNYNTNYKKLQYYNIINIE 117
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 351 KITDSINNNI*RAIVFY*YKTI*NDKSNDFTKKYKIVFYCNSLNME 214
KI S++NN Y Y N+ +N++ YK + Y N +N+E
Sbjct: 80 KIISSLSNN-------YKYSNY-NNYNNNYNTNYKKLQYYNIINIE 117
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 351 KITDSINNNI*RAIVFY*YKTI*NDKSNDFTKKYKIVFYCNSLNME 214
KI S++NN Y Y N+ +N++ YK + Y N +N+E
Sbjct: 80 KIISSLSNN-------YKYSNY-NNYNNNYNTNYKKLQYYNIINIE 117
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 351 KITDSINNNI*RAIVFY*YKTI*NDKSNDFTKKYKIVFYCNSLNME 214
KI S++NN Y Y N+ +N++ YK + Y N +N+E
Sbjct: 80 KIISSLSNN-------YKYSNY-NNYNNNYNTNYKKLQYYNIINIE 117
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 351 KITDSINNNI*RAIVFY*YKTI*NDKSNDFTKKYKIVFYCNSLNME 214
KI S++NN Y Y N+ +N++ YK + Y N +N+E
Sbjct: 80 KIISSLSNN-------YKYSNY-NNYNNNYNTNYKKLQYYNIINIE 117
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 351 KITDSINNNI*RAIVFY*YKTI*NDKSNDFTKKYKIVFYCNSLNME 214
KI S++NN Y Y N+ +N++ YK + Y N +N+E
Sbjct: 80 KIISSLSNN-------YKYSNY-NNYNNNYNTNYKKLQYYNIINIE 117
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 351 KITDSINNNI*RAIVFY*YKTI*NDKSNDFTKKYKIVFYCNSLNME 214
KI S++NN Y Y N+ +N++ YK + Y N +N+E
Sbjct: 80 KIISSLSNN-------YKYSNY-NNYNNNYNTNYKKLQYYNIINIE 117
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 5.6
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 168 QPHRSHPNNL 139
QP+R HP+NL
Sbjct: 107 QPYRPHPHNL 116
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 5.6
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 168 QPHRSHPNNL 139
QP+R HP+NL
Sbjct: 107 QPYRPHPHNL 116
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 218 MLRELQ*KTILYFFVKSFDLSF*IVLY**NTI 313
+LRE+ L++ K FD+ F L+ N I
Sbjct: 104 LLREMSALFKLFYHAKDFDIFFKTALWAKNNI 135
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 218 MLRELQ*KTILYFFVKSFDLSF*IVLY**NTI 313
+LRE+ L++ K FD+ F L+ N I
Sbjct: 104 LLREMSALFKLFYHAKDFDIFFKTALWAKNNI 135
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1
Query: 367 ETMATLNQYIWVHK 408
+TM N Y+W++K
Sbjct: 134 QTMTIPNHYLWLYK 147
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.0 bits (42), Expect = 9.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 418 WELIYVPIY 392
WE +Y+P+Y
Sbjct: 232 WEEVYIPLY 240
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,211
Number of Sequences: 438
Number of extensions: 4174
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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