Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1627
(569 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 2.8
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 23 2.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 8.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 8.6
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 8 VMCIKWLFTNIPLCSFSLLS 67
++C W+ +I LC+ S+LS
Sbjct: 109 MLCDSWVSLDILLCTASILS 128
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 22.6 bits (46), Expect = 2.8
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 445 PIALHDNASISQTD-YVETWQAMTDVLNQGLTKSIGVSNFNI 567
P+A+ D+ I ++ V Q ++ GLTK++ + N+NI
Sbjct: 69 PLAV-DSVKIGESQGSVTLRQEYKNIKLYGLTKNLEIKNYNI 109
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 212 RSTLATGISTLRQSTPPRTRSDVPL 286
RS T IST R +T T + +PL
Sbjct: 367 RSAFGTPISTGRPATVEDTSASLPL 391
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 212 RSTLATGISTLRQSTPPRTRSDVPL 286
RS T IST R +T T + +PL
Sbjct: 367 RSAFGTPISTGRPATVEDTSASLPL 391
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 212 RSTLATGISTLRQSTPPRTRSDVPL 286
RS T IST R +T T + +PL
Sbjct: 367 RSAFGTPISTGRPATVEDTSASLPL 391
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 212 RSTLATGISTLRQSTPPRTRSDVPL 286
RS T IST R +T T + +PL
Sbjct: 367 RSAFGTPISTGRPATVEDTSASLPL 391
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 212 RSTLATGISTLRQSTPPRTRSDVPL 286
RS T IST R +T T + +PL
Sbjct: 367 RSAFGTPISTGRPATVEDTSASLPL 391
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 212 RSTLATGISTLRQSTPPRTRSDVPL 286
RS T IST R +T T + +PL
Sbjct: 367 RSAFGTPISTGRPATVEDTSASLPL 391
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 212 RSTLATGISTLRQSTPPRTRSDVPL 286
RS T IST R +T T + +PL
Sbjct: 435 RSAFGTPISTGRPATVEDTSASLPL 459
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 212 RSTLATGISTLRQSTPPRTRSDVPL 286
RS T IST R +T T + +PL
Sbjct: 435 RSAFGTPISTGRPATVEDTSASLPL 459
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 64 QQRKRTQRNICKQP 23
+ R RT+R CK+P
Sbjct: 66 RSRDRTERERCKEP 79
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 64 QQRKRTQRNICKQP 23
+ R RT+R CK+P
Sbjct: 66 RSRDRTERERCKEP 79
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 64 QQRKRTQRNICKQP 23
+ R RT+R CK+P
Sbjct: 66 RSRDRTERERCKEP 79
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 64 QQRKRTQRNICKQP 23
+ R RT+R CK+P
Sbjct: 66 RSRDRTERERCKEP 79
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 64 QQRKRTQRNICKQP 23
+ R RT+R CK+P
Sbjct: 66 RSRDRTERERCKEP 79
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 64 QQRKRTQRNICKQP 23
+ R RT+R CK+P
Sbjct: 66 RSRDRTERERCKEP 79
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 64 QQRKRTQRNICKQP 23
+ R RT+R CK+P
Sbjct: 66 RSRDRTERERCKEP 79
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 294 DRRGSGQERRSVRHYKVME 350
D+ G G R ++ H+K +E
Sbjct: 531 DKNGDGPARYNIIHFKQIE 549
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.134 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,491
Number of Sequences: 438
Number of extensions: 4197
Number of successful extensions: 23
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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