Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1573
         (400 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              24   0.56 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   1.7  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   3.9  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   3.9  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   5.2  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    20   9.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   9.1  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +3

Query: 156 ADIRIQSPEDFLVTADCQGRADTDIHLLAAYLVMAILEVVTATHLL 293
           A+I +   E   +  +C   +D DIHL ++ L+    +  T   ++
Sbjct: 88  AEIYLDENEVNKLITECSAISDADIHLKSSKLIKCFAKYKTLKEIM 133


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +1

Query: 280 LPIFWRLVWSWQHRR 324
           L +FW   W W   R
Sbjct: 165 LSVFWGSAWQWNEER 179



 Score = 21.8 bits (44), Expect = 3.0
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +1

Query: 226 ISIFWRPIWSW 258
           +S+FW   W W
Sbjct: 165 LSVFWGSAWQW 175


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 189 LVTADCQGRADTDIHLLAAYLVMAILEVVTATHLL 293
           L+T +C   +DT++HL    +   I +  T   +L
Sbjct: 100 LIT-ECSAISDTNVHLKITKIFQCITKFKTINDIL 133


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 43  KQTHFHNVFKTLCVIATYCDFVYY*CTK 126
           K T  HN F+    +   CD ++   TK
Sbjct: 199 KPTRDHNAFEYAMAVMKMCDILHLRHTK 226


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 362 DQTCLLKTGSRDY 324
           +QTC+LK GS  Y
Sbjct: 164 EQTCVLKFGSWTY 176


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 362 DQTCLLKTGSRDY 324
           +QTC++K GS  Y
Sbjct: 160 EQTCVMKFGSWTY 172


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 238 RRWISVSARP 209
           RRW+S  +RP
Sbjct: 454 RRWVSTMSRP 463


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,221
Number of Sequences: 438
Number of extensions: 2062
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)