Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1572
(518 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 1.9
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 2.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 2.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 2.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.5
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 3.3
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 4.3
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 5.7
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 21 7.6
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 7.6
AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. 21 7.6
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = -2
Query: 298 SISNEDIKNDSAFKY-YENK 242
S+SN+ I N++ +KY Y NK
Sbjct: 84 SLSNKTIHNNNNYKYNYNNK 103
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 2.5
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 298 SISNEDIKNDSAFKY-YENKSPASRAANYYCSYRLN 194
S+SN+ I N++ +KY Y N + + Y Y +N
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNYNNNCKKLY--YNIN 117
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 2.5
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 298 SISNEDIKNDSAFKY-YENKSPASRAANYYCSYRLN 194
S+SN+ I N++ +KY Y N + + Y Y +N
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNYNNNCKKLY--YNIN 117
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 2.5
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 298 SISNEDIKNDSAFKY-YENKSPASRAANYYCSYRLN 194
S+SN+ I N++ +KY Y N + + Y Y +N
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNYNNNCKKLY--YNIN 117
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 2.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 298 SISNEDIKNDSAFKYYENKSPASRAANYYCSYRLN 194
S+SN+ I N++ +KY N + + NY +Y N
Sbjct: 317 SLSNKTIHNNNNYKYNYNNNNYNN-NNYNNNYNNN 350
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 3.3
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 298 SISNEDIKNDSAFKY-YENKSPASRAANYYCSYRLN 194
S+SN I N++ +KY Y N + + Y Y +N
Sbjct: 84 SLSNRTIHNNNNYKYNYNNNNYNNNCKKLY--YNIN 117
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 4.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 298 SISNEDIKNDSAFKYYENK 242
S+SN+ I N++ + Y NK
Sbjct: 306 SLSNKTIHNNNNYNNYNNK 324
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 298 SISNEDIKNDSAFKYYENKS 239
S+SN+ I N++ +KY N +
Sbjct: 84 SLSNKTIHNNNNYKYNYNNN 103
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 21.0 bits (42), Expect = 7.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 145 YGYHKRRAARDAPAENKKINRGARLSRKKVRL 50
Y KR+ + P E+ + A + RKKV L
Sbjct: 38 YNNIKRKRSWSRPRESAQTTSKAGIHRKKVLL 69
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.0 bits (42), Expect = 7.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 160 SYGKSYGYHKRRAARDAPAENKKINRGARLSR 65
+YG++ G R ++ P I RGA + R
Sbjct: 421 TYGRNAGLRYRGPKQNKPKVLHAIRRGASILR 452
>AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein.
Length = 148
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 226 AANYYCSYRLNLHIDVTNENT 164
A N CS +H VTN +T
Sbjct: 44 AGNVSCSVSWEVHDPVTNSDT 64
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,040
Number of Sequences: 438
Number of extensions: 2945
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -