Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1498
(613 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 1.8
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 1.8
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 23 3.1
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 21 7.2
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 7.2
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 7.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.5
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 9.5
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 9.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.5
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 407 FFNSQVLNEINQPLIY 360
FFNS+VL + N LI+
Sbjct: 170 FFNSEVLQKANHALIF 185
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 407 FFNSQVLNEINQPLIY 360
FFNS+VL + N LI+
Sbjct: 170 FFNSEVLQKANHALIF 185
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 285 RFLRNPSICNVNIT 244
RFL+NP CNV T
Sbjct: 187 RFLKNPRPCNVLAT 200
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 379 ISFKTCELKKIRN 417
+SFK C LK +RN
Sbjct: 136 LSFKLCMLKAMRN 148
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 582 FLPSESTEQYSRCTS 538
+LPS+S E+ S C+S
Sbjct: 272 YLPSDSGEKVSLCSS 286
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.4 bits (43), Expect = 7.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 145 LFLKYYRNLQNTI*LVIWVGNKKVNLKVNTIEI*LNLSTN 26
L + + +N NTI + + NK+ N K+ T + NL+ N
Sbjct: 505 LLINFSKN--NTIVDISKLVNKRNNAKIYTSSVNSNLTVN 542
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 44 SYFNCVHFQI 73
SYFNC+ F +
Sbjct: 259 SYFNCIMFMV 268
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 44 SYFNCVHFQI 73
SYFNC+ F +
Sbjct: 259 SYFNCIMFMV 268
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 44 SYFNCVHFQI 73
SYFNC+ F +
Sbjct: 259 SYFNCIMFMV 268
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 44 SYFNCVHFQI 73
SYFNC+ F +
Sbjct: 259 SYFNCIMFMV 268
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 44 SYFNCVHFQI 73
SYFNC+ F +
Sbjct: 259 SYFNCIMFMV 268
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 44 SYFNCVHFQI 73
SYFNC+ F +
Sbjct: 259 SYFNCIMFMV 268
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -3
Query: 425 NHELRIFFNSQVLNEINQPLIYSLQ 351
NH+ ++ N +L+ P++ LQ
Sbjct: 15 NHKEQLISNDYILDNYTSPIVEFLQ 39
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +1
Query: 487 IIIMKFENTEHVLKTMFRCTPRVLFSTLTGEKFVPLWTDSIQ 612
II E + ++ T C P+V+ + T E + +W ++
Sbjct: 254 IINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVK 295
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 44 SYFNCVHFQI 73
SYFNC+ F +
Sbjct: 327 SYFNCIMFMV 336
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 44 SYFNCVHFQI 73
SYFNC+ F +
Sbjct: 327 SYFNCIMFMV 336
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,205
Number of Sequences: 438
Number of extensions: 2942
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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