Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1376
         (713 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065493-1|BAC05745.1|  312|Homo sapiens seven transmembrane hel...    31   5.4  
AF399557-1|AAK95042.1|  216|Homo sapiens olfactory receptor prot...    30   7.2  
AB065736-1|BAC05957.1|  312|Homo sapiens seven transmembrane hel...    30   7.2  

>AB065493-1|BAC05745.1|  312|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 312

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 15/61 (24%), Positives = 33/61 (54%)
 Frame = -2

Query: 445 FSTLNNITNDNINKISINAKLKKKSVSIARITREQYF*ECSIVRSVAVVATFNVEHYAA* 266
           F+ +++I+N ++ K+ +N + K +S+S      + YF    +V    ++ T   +H+ A 
Sbjct: 68  FADISSISN-SVPKMLVNIQTKSQSISYESCITQMYFSIVFVVIDNLLLGTMAYDHFVAI 126

Query: 265 C 263
           C
Sbjct: 127 C 127


>AF399557-1|AAK95042.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 20/85 (23%), Positives = 41/85 (48%)
 Frame = -2

Query: 445 FSTLNNITNDNINKISINAKLKKKSVSIARITREQYF*ECSIVRSVAVVATFNVEHYAA* 266
           F+ +++I+N ++ K+ +N +   +S+S      + YF    +V    ++ T   +H+ A 
Sbjct: 1   FADISSISN-SVPKMLVNIQTNSQSISYESCITQMYFSIVFVVTDNLLLGTMAFDHFVAI 59

Query: 265 CALVLNWKTTTEYRSFKLKKSVTHF 191
           C   LN+ T    R   L   ++ F
Sbjct: 60  CH-PLNYTTFMRARFGTLLTVISWF 83


>AB065736-1|BAC05957.1|  312|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 20/85 (23%), Positives = 41/85 (48%)
 Frame = -2

Query: 445 FSTLNNITNDNINKISINAKLKKKSVSIARITREQYF*ECSIVRSVAVVATFNVEHYAA* 266
           F+ +++I+N ++ K+ +N +   +S+S      + YF    +V    ++ T   +H+ A 
Sbjct: 68  FADISSISN-SVPKMLVNIQTNSQSISYESCITQMYFSIVFVVTDNLLLGTMAFDHFVAI 126

Query: 265 CALVLNWKTTTEYRSFKLKKSVTHF 191
           C   LN+ T    R   L   ++ F
Sbjct: 127 CH-PLNYTTFMRARFGTLLTVISWF 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,636,304
Number of Sequences: 237096
Number of extensions: 1628749
Number of successful extensions: 2767
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2767
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)