Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1350
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    46   2e-07
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 46.4 bits (105), Expect = 2e-07
 Identities = 25/55 (45%), Positives = 29/55 (52%)
 Frame = +2

Query: 362 CDYTGIKLIVGGENANNGEFPHMAAIGWTNFEGSYTFSCGGSLISPRFVLTAGHC 526
           C +     IVGG N    EFP MA I  T   G     CG ++IS R+VLTA HC
Sbjct: 153 CGWKNPSRIVGGTNTGINEFPMMAGIKRTYEPGMI---CGATIISKRYVLTAAHC 204


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 502 SGTDEAAPAGEGVGAFEISPTYGGH 428
           SG+  A+PA  GV   E S + GG+
Sbjct: 238 SGSLPASPADSGVSDVESSTSSGGN 262


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,364
Number of Sequences: 438
Number of extensions: 4140
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)