Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1231
         (572 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   0.53 
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   3.8  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   3.8  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   5.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.7  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 41  FPSITSQPRSSLDAATSRACTTPVRRPSPTVGHFTRS 151
           FP I+   R  ++    R    P+R P   + H+ R+
Sbjct: 102 FPMISVFSRQDIETIIRRNSRYPLRPPQEVISHYRRT 138


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 342 SIFFKHIYLFLLQIFYYEYETL 407
           SI F H    +L IF Y  ET+
Sbjct: 6   SIMFIHSIFLILIIFIYSNETI 27


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 342 SIFFKHIYLFLLQIFYYEYETL 407
           SI F H    +L IF Y  ET+
Sbjct: 6   SIMFIHSIFLILIIFIYSNETI 27


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 329 LTDIIYIF*TYLSIFVTNFL 388
           LT I+ I  TY+ IFVT F+
Sbjct: 30  LTLIVPITLTYVVIFVTGFV 49


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = -2

Query: 145 CKVAYGWRRPSYRSSARTRGCRVQ*TSWLARDRRKDCASCRI 20
           C+   G+ R S +   + R C       + R  R  C  CR+
Sbjct: 84  CEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRL 125


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 177 QVHVIPDAELLVKWPTVG 124
           ++HV P   +L+K+P  G
Sbjct: 625 RIHVSPTTYILLKYPISG 642


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,191
Number of Sequences: 438
Number of extensions: 3119
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)