Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1201
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              24   1.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   5.6  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   7.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.4  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   7.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.4  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 328 KARDFEDCILCILNEEEN*RN 390
           K RD  +  + ++NEEEN RN
Sbjct: 47  KLRDSSEARIKLINEEENFRN 67


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 412 IFWICWICLFIVQI 453
           +F ICW+  F+V +
Sbjct: 343 VFIICWLPFFVVNL 356


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 551 IESNDGIAEKTEG*NCSKIQ 610
           I SN+ IA+ T+  NC  +Q
Sbjct: 21  IYSNETIAQVTDDENCETLQ 40


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 147 TMSETAQVSSLPLPPMQYINFYTDENVRR 233
           ++S T  +  L  P +  I F  D+N+RR
Sbjct: 745 SLSATVTLVCLYSPKIYIILFQPDKNIRR 773



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 403 SEWLSFFNSLLRSKCIGYNLRNPWLS 326
           SE +  F+  + S     N RNPW S
Sbjct: 257 SENIPGFDDYMASLTPDTNRRNPWFS 282


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 551 IESNDGIAEKTEG*NCSKIQ 610
           I SN+ IA+ T+  NC  +Q
Sbjct: 21  IYSNETIAQVTDDENCETLQ 40


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 147 TMSETAQVSSLPLPPMQYINFYTDENVRR 233
           ++S T  +  L  P +  I F  D+N+RR
Sbjct: 835 SLSATVTLVCLYSPKIYIILFQPDKNIRR 863



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 403 SEWLSFFNSLLRSKCIGYNLRNPWLS 326
           SE +  F+  + S     N RNPW S
Sbjct: 347 SENIPGFDDYMASLTPDTNRRNPWFS 372


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,845
Number of Sequences: 438
Number of extensions: 2950
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)