Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1174
         (491 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    29   0.035
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    29   0.035
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    29   0.035
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    26   0.19 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.44 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.3  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   3.1  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   5.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.1  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 0.035
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 282 FDFPGISDLPSDEGSNHGNIRDYYLKPGY-DNHREALKQDVDLDGKISSNEISGLLKQ 452
           FDFP +S   SDEGSN     +  L+P + D   + L+  +    K    +++G+L +
Sbjct: 54  FDFPSLSFEDSDEGSNWN--WNTLLRPNFLDGWYQTLQSAISAHMKKVREQMAGILSR 109


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 0.035
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 282 FDFPGISDLPSDEGSNHGNIRDYYLKPGY-DNHREALKQDVDLDGKISSNEISGLLKQ 452
           FDFP +S   SDEGSN     +  L+P + D   + L+  +    K    +++G+L +
Sbjct: 54  FDFPSLSFEDSDEGSNWN--WNTLLRPNFLDGWYQTLQSAISAHMKKVREQMAGILSR 109


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 0.035
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 282 FDFPGISDLPSDEGSNHGNIRDYYLKPGY-DNHREALKQDVDLDGKISSNEISGLLKQ 452
           FDFP +S   SDEGSN     +  L+P + D   + L+  +    K    +++G+L +
Sbjct: 54  FDFPSLSFEDSDEGSNWN--WNTLLRPNFLDGWYQTLQSAISAHMKKVREQMAGILSR 109


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 282 FDFPGISDLPSDEGSN 329
           FDFP +S   SDEGSN
Sbjct: 10  FDFPSLSFEDSDEGSN 25


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 330 HGNIRDYYLKPGYDNHREALKQDVDLDGK 416
           H  +  YYLKP YD    A K  V   G+
Sbjct: 403 HQEMALYYLKPSYDAQEPAWKTHVWKKGR 431


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 99  ENRSGAALAEYQETNVIC 46
           EN  G  LAE+  T V+C
Sbjct: 50  ENLLGRVLAEFDGTTVLC 67


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 346 SLMLPWLEPSSEGKSLI 296
           +LM  WLEPSS  + +I
Sbjct: 261 TLMTLWLEPSSTERMII 277


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 117 SDDEDDGDELYSRN 158
           S D DD DE Y+ N
Sbjct: 75  SSDHDDSDEEYAAN 88


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/44 (25%), Positives = 17/44 (38%)
 Frame = +3

Query: 174  IDPMDLHRDFTKHMLEMFRSFGSMFGDVQSFFHDENFDFPGISD 305
            ++P D   +      EM R  G      +S+  D     PG S+
Sbjct: 1161 VEPTDKQANSKTRRQEMMREAGRGIESAKSYVVDVRVHVPGESE 1204


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,034
Number of Sequences: 438
Number of extensions: 3330
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)