Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1163
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   3.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   3.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.3  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 89  MLIFLPEKNTWVKEIFYSLEATRLTSLFNVYKNEGLKLVNVKLP 220
           +LI +    T++  +FY L  T    L+N+  N+  +   + LP
Sbjct: 321 VLIIIYTILTYMSGVFYYLSTTVNPLLYNIMSNKFREAFKLMLP 364


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +2

Query: 221 KFKISTEIENLPELLVDMGIERIFSPDSAEFGGISDYKIYASLMTQIC 364
           K +  +E+E+   L  DM IERI   +      +     Y + ++ IC
Sbjct: 188 KERDQSEVESTSSLHSDMPIERILEAEKRVECKMEQQGNYENAVSHIC 235


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +2

Query: 221 KFKISTEIENLPELLVDMGIERIFSPDSAEFGGISDYKIYASLMTQIC 364
           K +  +E+E+   L  DM IERI   +      +     Y + ++ IC
Sbjct: 188 KERDQSEVESTSSLHSDMPIERILEAEKRVECKMEQQGNYENAVSHIC 235


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 96  YSYPKKTRGSRRYFTH 143
           Y  PK+ RG   YF H
Sbjct: 250 YHMPKEIRGQLYYFLH 265


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 96  YSYPKKTRGSRRYFTH 143
           Y  PK+ RG   YF H
Sbjct: 250 YHMPKEIRGQLYYFLH 265


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,553
Number of Sequences: 438
Number of extensions: 3721
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)