Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1151
         (742 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    26   0.32 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    26   0.32 
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   4.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   4.0  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   4.0  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    22   5.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   7.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   9.2  
AY078400-1|AAL83703.1|   31|Apis mellifera major royal jelly pro...    21   9.2  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +3

Query: 474 YDHTTMEQGSWGTDFR-RGFEVAHDL---FGVYATDVYTDEAIKVVNSHNKSEPLFLMLA 641
           YD   +E+G      + R +++   L   +G +  D+YT+E++  ++S      + L L 
Sbjct: 31  YDFYPLERGELTNSGKMREYQLGQFLRERYGDFLGDIYTEESVSALSSFYDRTKMSLQLV 90

Query: 642 HSAVHSGN 665
            +A++  N
Sbjct: 91  LAALYPPN 98


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +3

Query: 474 YDHTTMEQGSWGTDFR-RGFEVAHDL---FGVYATDVYTDEAIKVVNSHNKSEPLFLMLA 641
           YD   +E+G      + R +++   L   +G +  D+YT+E++  ++S      + L L 
Sbjct: 46  YDFYPLERGELTNSGKMREYQLGQFLRERYGDFLGDIYTEESVSALSSFYDRTKMSLQLV 105

Query: 642 HSAVHSGN 665
            +A++  N
Sbjct: 106 LAALYPPN 113


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 500 IVGNRLQERFRGSSR 544
           +VG+ L++RF G+SR
Sbjct: 6   VVGDNLKDRFDGASR 20


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = -1

Query: 379 PTKCVL*PKSFKYCGSIFSLRGKPRGSAPYITPCC 275
           P KC +  K+F   G +        G  PY+   C
Sbjct: 175 PHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKAC 209


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 500 IVGNRLQERFRGSSR 544
           +VG+ L++RF G+SR
Sbjct: 7   VVGDNLKDRFDGASR 21


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 385 GISGATKRNICL*IEGSIVTSVSGLEGSTCTTTRPW 492
           G  G  + ++ +  +GS +    G+ GSTC     W
Sbjct: 82  GFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAW 117


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
          protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 30 SWLVLIVILGVA 65
          +WL+L+V LG+A
Sbjct: 3  TWLLLVVCLGIA 14


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
          RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 33 WLVLIVILGVA 65
          WL+L+V LG+A
Sbjct: 4  WLLLVVCLGIA 14


>AY078400-1|AAL83703.1|   31|Apis mellifera major royal jelly
          protein MRJP3 protein.
          Length = 31

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 33 WLVLIVILGVA 65
          WL+L+V LG+A
Sbjct: 4  WLLLVVCLGIA 14


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,863
Number of Sequences: 438
Number of extensions: 5932
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)