Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1146
(635 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 195 5e-51
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 126 2e-30
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 126 2e-30
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 118 7e-28
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 116 2e-27
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 111 6e-26
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 104 9e-24
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.32
SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 28 1.3
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 27 1.7
SPAC17A5.08 |||COPII-coated vesicle component Erp2/3/4 |Schizosa... 27 1.7
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 1.7
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 27 3.0
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 26 5.2
SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 5.2
SPAC1399.05c |||transcription factor, zf-fungal binuclear cluste... 25 6.9
SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|c... 25 9.1
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 25 9.1
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 195 bits (475), Expect = 5e-51
Identities = 90/179 (50%), Positives = 126/179 (70%)
Frame = +1
Query: 97 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 276
MSSIGTGYDL FSPDGR+FQ EYA KAVEN+ T IG++ +DGV+ A+EK++TSKL +
Sbjct: 1 MSSIGTGYDLGLF-FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLK 59
Query: 277 PGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYM 456
P N RI +D H+G+A G I D + IV+ AR EA+++R YGSP+P + +R+ Y+
Sbjct: 60 PRVNNRIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYV 119
Query: 457 HAYTLYCAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEK 633
+T Y +VRP+G + T+ D EGP +YM++P+GV + Y G A GK +Q A+ E+EK
Sbjct: 120 QLFTCYSSVRPFGVMSFVATY-DSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEK 177
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 126 bits (305), Expect = 2e-30
Identities = 66/175 (37%), Positives = 101/175 (57%), Gaps = 1/175 (0%)
Frame = +1
Query: 112 TGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANK 291
+GYD + S FSPDGR+ QVEY +AV T I LRG + +V VE+ KL +
Sbjct: 2 SGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQ 61
Query: 292 RIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTL 471
+I +D HV +A AGL +DAR +++ AR EA N++ PV ++YL V+ YT
Sbjct: 62 KIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQ 121
Query: 472 YCAVRPYGCS-VVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEK 633
VRP+G S ++ G P++Y +P+G+ ++ A+G+A +AA+ +EK
Sbjct: 122 SGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEK 176
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 126 bits (305), Expect = 2e-30
Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 6/178 (3%)
Frame = +1
Query: 118 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 297
YD + FSP+GR+FQVEYA +A++ T IG++ KD VV VEK +TS L E + +++
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKL 67
Query: 298 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAY---- 465
F ID H+G A++GL +DAR I+E AR + N+R Y P ++ + + +
Sbjct: 68 FEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGE 127
Query: 466 --TLYCAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEK 633
RP+G ++++ D GPQ+Y +PSG F Y A+G + AK+E+ K
Sbjct: 128 DGEERIMSRPFGVALLI-AGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVK 184
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 118 bits (284), Expect = 7e-28
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Frame = +1
Query: 118 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KR 294
YD + FSP+GR++QVEYA +A+ ++G +G+ KDG+V A EK +TSKL E + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEK 64
Query: 295 IFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLY 474
++HI +++ AVAGL +DA ++ AR Y + +P + L RV YT Y
Sbjct: 65 LYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQY 124
Query: 475 CAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVG 597
+RP+G S + W G Q++ +PSG S+ ++G
Sbjct: 125 GGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIG 165
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 116 bits (280), Expect = 2e-27
Identities = 63/173 (36%), Positives = 99/173 (57%), Gaps = 1/173 (0%)
Frame = +1
Query: 118 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 297
Y S + FSP+G++ Q+EYA AV T +G++ DGVV A EK TS+L + +++
Sbjct: 5 YAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKV 64
Query: 298 FHIDEHVGMAVAGLISDARQIVETARSEA-SNYRSQYGSPVPLKYLNERVSMYMHAYTLY 474
I +GM +G+ D R +V+ +R A + Y+ Y P K L + ++ M T
Sbjct: 65 CAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQS 124
Query: 475 CAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEK 633
VRP+G S+++ D +GP +Y +DPSG F++ A+GK+ AAKT +EK
Sbjct: 125 GGVRPFGVSLLV-AGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEK 176
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 111 bits (268), Expect = 6e-26
Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
Frame = +1
Query: 115 GYDLSASQFSPDGRVFQVEYAAKAVENSG-TVIGLRGKDGVVFAVEKLITSKLYEPGANK 291
G+D + + FSP+GR++QVEYA KA N+G T +G+ GK+ +K + KL + K
Sbjct: 6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVK 65
Query: 292 RIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTL 471
+F I + +G + G I+DAR V ARSEA+ + + G P+P L +R++ T
Sbjct: 66 HVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQ 125
Query: 472 YCAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEK 633
A+RP G ++ + D GP ++ LDP+G Y + G + +EK
Sbjct: 126 RAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEK 179
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 104 bits (250), Expect = 9e-24
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 1/173 (0%)
Frame = +1
Query: 118 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 297
YD A+ +SP GR+ QVEYA +A++ +GL K V K +L K++
Sbjct: 6 YDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEEL--SSYQKKL 63
Query: 298 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYC 477
ID+H+G+A+AGL DAR + + EA + ++ + P+P++ L +V+ T
Sbjct: 64 IRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEY 123
Query: 478 AVRPYGCS-VVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEK 633
RPYG +V+G D GP + PSG+ Y G ++G Q+A+T IE+
Sbjct: 124 GRRPYGVGFLVIG--YDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIER 174
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.32
Identities = 17/70 (24%), Positives = 31/70 (44%)
Frame = -1
Query: 365 STICLASDMSPATAMPTCSSIWNILLFAPGSYSLDVINFSTANTTPSFPRRPITVPEFST 186
+T C S P T+ P SS + I P + + T +T+ + PIT P ++
Sbjct: 552 TTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPITSPNSTS 611
Query: 185 AFAAYSTWKT 156
+ + +W +
Sbjct: 612 SSSTQVSWNS 621
>SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor
Raf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 252 LLNSKYHSVFSSEANYCSRIFYSLCSIFHLENAT 151
LL +KY V+SS N C +++ ++F +T
Sbjct: 488 LLRNKYPKVYSSTPNLCDQVWLDRTNLFPCNRST 521
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 27.5 bits (58), Expect = 1.7
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 DEHVG-MAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYCAV 483
D H+G + + + ++ V T+ + + +YG+PVP+K++ + MH+ A+
Sbjct: 393 DHHLGGINSITFLENGKRFVTTSDDSSMRFW-EYGTPVPIKFV---ADIAMHSMP-RVAL 447
Query: 484 RPYGCSV 504
RP G S+
Sbjct: 448 RPNGKSI 454
>SPAC17A5.08 |||COPII-coated vesicle component Erp2/3/4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +1
Query: 82 KQCVNMSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVF 240
KQC + S TG + G F V+Y KA +G + + VF
Sbjct: 32 KQCYYLDSFHTGEKTHFTYAVQSGGSFDVDYMIKAPSQKTVALGKKRRQADVF 84
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 359 ICLASDMSPATAMPTCSSIWNI--LLFAPGSYSLDVINFSTANTTPSFPRR 213
I L++ + + P C +++ L + PGSY L I+ N PR+
Sbjct: 455 IALSTKLYTGSIFPKCEKDFDLHFLAYKPGSYDLSSISIEDVNHVVHKPRK 505
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 224 KTEWYLLLRS*SHPNCMNLAQTRGYSILMN 313
+ E++LL + SHPN N A Y +L+N
Sbjct: 64 ENEYFLLRQLSSHPNGRNYAIAPAYILLLN 93
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 223 KDGVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDAR 354
K G+V +V++ I + YE + +FHI E++ ++++ LI R
Sbjct: 207 KSGLVNSVDRCI--QFYEKSISLPMFHIAENLAISLSCLIISFR 248
>SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 350
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 70 SKYIKQCVNMSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTV 207
S ++ + + + +G G +S +G V + KAVENS +
Sbjct: 196 SSFVSRAASPAMVGPGVPFYSSITGANGNVLAPSGSLKAVENSDVI 241
>SPAC1399.05c |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.4 bits (53), Expect = 6.9
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = -2
Query: 607 VWL---FRLRNRNMKKIHHW--DLAYTSEGLHSLSMCP*RLSNHMAEQRSIVCM 461
+WL F L++R + W A +S L L + P R NH+ ++CM
Sbjct: 229 LWLLSGFALQHRTLSSTKGWFNGFAGSSATLTYLDIVPARTWNHLCHGHLVMCM 282
>SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 571
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 235 VFAVEKLITSKLYEPGANKRIFHID 309
VF L +L +PGA KR+FH +
Sbjct: 137 VFPAPILDVRELTKPGAVKRVFHFE 161
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 25.0 bits (52), Expect = 9.1
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = -1
Query: 386 DASERAVSTICLAS--DMSPATAMPTCSSIWNILLFAPGSYSLDVINFSTANTTPSFPRR 213
D E A + + + DM +T +P + ++ FAP S D S+ + TP
Sbjct: 236 DVGESAANNVFAFNQKDMVDSTYLPPFNYDHDVFSFAPSVASADQFTESSMSPTPEVVSP 295
Query: 212 PITVPEFSTAFAAYST 165
T S+ F S+
Sbjct: 296 AATNSAISSPFVRKSS 311
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,800,594
Number of Sequences: 5004
Number of extensions: 60011
Number of successful extensions: 195
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -