Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1113
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   1.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   1.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   1.9  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   4.3  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   4.3  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   4.3  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   4.3  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   4.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.9  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 482 GTFIPCLFRFFLVSIILP 535
           G F+ C   FFL+ +I+P
Sbjct: 334 GVFVVCWLPFFLMYVIVP 351


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 482 GTFIPCLFRFFLVSIILP 535
           G F+ C   FFL+ +I+P
Sbjct: 334 GVFVVCWLPFFLMYVIVP 351


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 482 GTFIPCLFRFFLVSIILP 535
           G F+ C   FFL+ +I+P
Sbjct: 334 GVFVVCWLPFFLMYVIVP 351


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 380 ICYNLQWXXXXXXXXXXXFGNLPNRP 303
           +CYN+ +           +GN P RP
Sbjct: 102 LCYNINYIEQIPVPVPVYYGNFPPRP 127


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 380 ICYNLQWXXXXXXXXXXXFGNLPNRP 303
           +CYN+ +           +GN P RP
Sbjct: 102 LCYNINYIEQIPVPVPVYYGNFPPRP 127


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 380 ICYNLQWXXXXXXXXXXXFGNLPNRP 303
           +CYN+ +           +GN P RP
Sbjct: 102 LCYNINYIEQIPVPVPVYYGNFPPRP 127


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 380 ICYNLQWXXXXXXXXXXXFGNLPNRP 303
           +CYN+ +           +GN P RP
Sbjct: 102 LCYNINYIEQIPVPVPVYYGNFPPRP 127


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 380 ICYNLQWXXXXXXXXXXXFGNLPNRP 303
           +CYN+ +           +GN P RP
Sbjct: 102 LCYNINYIEQIPVPVPVYYGNFPPRP 127


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +2

Query: 359 TTANYNRSVEFALTAVVPK----FILLMKYCLLSTLP 457
           +TA+    +    T V P+    ++LLM Y L +TLP
Sbjct: 112 STAHLLAQLFLKSTEVTPRDGLGWLLLMLYLLFATLP 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,537
Number of Sequences: 438
Number of extensions: 3446
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)