Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1111
         (680 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...   193   2e-49
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...   193   2e-49
BT011194-1|AAR88556.1|  398|Drosophila melanogaster LD16247p pro...    32   0.63 
X75026-1|CAA52934.1|  601|Drosophila melanogaster Drosophila cyc...    29   4.5  
X51652-1|CAA35964.1|  782|Drosophila melanogaster Bic-D protein ...    29   4.5  
M31684-1|AAA28393.1|  782|Drosophila melanogaster protein ( D.me...    29   4.5  
AY069507-1|AAL39652.1|  709|Drosophila melanogaster LD22682p pro...    29   4.5  
AY069452-1|AAL39597.1|  782|Drosophila melanogaster LD17129p pro...    29   4.5  
AY061233-1|AAL28781.1|  410|Drosophila melanogaster LD17578p pro...    29   4.5  
AE014134-2851|AAF53616.1|  782|Drosophila melanogaster CG6605-PA...    29   4.5  
AE014134-2628|AAF53479.1|  602|Drosophila melanogaster CG3938-PB...    29   4.5  
AE014134-2627|AAN10908.1|  709|Drosophila melanogaster CG3938-PE...    29   4.5  
AE014134-2626|AAN10907.1|  709|Drosophila melanogaster CG3938-PD...    29   4.5  
AE014134-2625|AAF53478.1|  709|Drosophila melanogaster CG3938-PC...    29   4.5  
AE014134-2624|AAF53477.1|  709|Drosophila melanogaster CG3938-PA...    29   4.5  

>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score =  193 bits (471), Expect = 2e-49
 Identities = 86/142 (60%), Positives = 106/142 (74%)
 Frame = +3

Query: 255 AYLERAKEHDEFMKRQQFEYNIGKRHLANMMGEDPELFTQKDVERAIEYLFPSGIYDPAA 434
           AYL+RA EHDEFMK Q  E+ IGKRHLANMMG D E FTQ+D++ AI YLFPSG+YD  A
Sbjct: 61  AYLKRATEHDEFMKTQHLEFQIGKRHLANMMGADAETFTQEDIDEAISYLFPSGLYDQKA 120

Query: 435 RPSMRPPEDVFPARKAAEFDEAGRPHHCLFYTGKPNFFKLLHDAADHLQQLYKYEDQVIR 614
           RP+M+ PE VFPARKAAEFDE GRP H +FYTGKPNFF+LLHD  +   +L   E++++R
Sbjct: 121 RPAMKSPEVVFPARKAAEFDETGRPFHSMFYTGKPNFFQLLHDIVEETNKLADLEERMLR 180

Query: 615 KKATPDPNGNLQLGGSMWVNKD 680
           +   PD N  L++ G   + KD
Sbjct: 181 RGNKPDENQKLEIAGFQLLPKD 202


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score =  193 bits (471), Expect = 2e-49
 Identities = 86/142 (60%), Positives = 106/142 (74%)
 Frame = +3

Query: 255 AYLERAKEHDEFMKRQQFEYNIGKRHLANMMGEDPELFTQKDVERAIEYLFPSGIYDPAA 434
           AYL+RA EHDEFMK Q  E+ IGKRHLANMMG D E FTQ+D++ AI YLFPSG+YD  A
Sbjct: 61  AYLKRATEHDEFMKTQHLEFQIGKRHLANMMGADAETFTQEDIDEAISYLFPSGLYDQKA 120

Query: 435 RPSMRPPEDVFPARKAAEFDEAGRPHHCLFYTGKPNFFKLLHDAADHLQQLYKYEDQVIR 614
           RP+M+ PE VFPARKAAEFDE GRP H +FYTGKPNFF+LLHD  +   +L   E++++R
Sbjct: 121 RPAMKSPEVVFPARKAAEFDETGRPFHSMFYTGKPNFFQLLHDIVEETNKLADLEERMLR 180

Query: 615 KKATPDPNGNLQLGGSMWVNKD 680
           +   PD N  L++ G   + KD
Sbjct: 181 RGNKPDENQKLEIAGFQLLPKD 202


>BT011194-1|AAR88556.1|  398|Drosophila melanogaster LD16247p
           protein.
          Length = 398

 Score = 32.3 bits (70), Expect = 0.63
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 549 KLLHDAADHLQQLYKYEDQVIRKKATPDPNGNLQL 653
           K  H A  HLQ L+  E  +++K  +P P  NL +
Sbjct: 20  KSSHTAITHLQNLHMVEQLIVQKNFSPSPTDNLSI 54


>X75026-1|CAA52934.1|  601|Drosophila melanogaster Drosophila cyclin
           E type I protein.
          Length = 601

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +3

Query: 12  YIFITIFDATKDICSNLHTAKMSLIGIRQIIPAATKYFRYPLTIGTFQYCTRTTSDPSNV 191
           Y+ +   D    +   +    + LIGI  +  AA     YP  IG F Y T       ++
Sbjct: 277 YLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDI 336

Query: 192 LN 197
           LN
Sbjct: 337 LN 338


>X51652-1|CAA35964.1|  782|Drosophila melanogaster Bic-D protein
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 526 ILENQISLNYFMTLPTIYNNFTNMKTKLL--ERKQLLIQ 636
           I E Q  LNY     T+ N  TN+K KLL  E+K L +Q
Sbjct: 431 IAELQKGLNYTDATTTLRNEVTNLKNKLLATEQKSLDLQ 469


>M31684-1|AAA28393.1|  782|Drosophila melanogaster protein (
           D.melanogaster cytoskeleton-like bicaudalD protein
           (BicD) mRNA, complete cds. ).
          Length = 782

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 526 ILENQISLNYFMTLPTIYNNFTNMKTKLL--ERKQLLIQ 636
           I E Q  LNY     T+ N  TN+K KLL  E+K L +Q
Sbjct: 431 IAELQKGLNYTDATTTLRNEVTNLKNKLLATEQKSLDLQ 469


>AY069507-1|AAL39652.1|  709|Drosophila melanogaster LD22682p
           protein.
          Length = 709

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +3

Query: 12  YIFITIFDATKDICSNLHTAKMSLIGIRQIIPAATKYFRYPLTIGTFQYCTRTTSDPSNV 191
           Y+ +   D    +   +    + LIGI  +  AA     YP  IG F Y T       ++
Sbjct: 384 YLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDI 443

Query: 192 LN 197
           LN
Sbjct: 444 LN 445


>AY069452-1|AAL39597.1|  782|Drosophila melanogaster LD17129p
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 526 ILENQISLNYFMTLPTIYNNFTNMKTKLL--ERKQLLIQ 636
           I E Q  LNY     T+ N  TN+K KLL  E+K L +Q
Sbjct: 431 IAELQKGLNYTDATTTLRNEVTNLKNKLLATEQKSLDLQ 469


>AY061233-1|AAL28781.1|  410|Drosophila melanogaster LD17578p
           protein.
          Length = 410

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +3

Query: 12  YIFITIFDATKDICSNLHTAKMSLIGIRQIIPAATKYFRYPLTIGTFQYCTRTTSDPSNV 191
           Y+ +   D    +   +    + LIGI  +  AA     YP  IG F Y T       ++
Sbjct: 85  YLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDI 144

Query: 192 LN 197
           LN
Sbjct: 145 LN 146


>AE014134-2851|AAF53616.1|  782|Drosophila melanogaster CG6605-PA
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 526 ILENQISLNYFMTLPTIYNNFTNMKTKLL--ERKQLLIQ 636
           I E Q  LNY     T+ N  TN+K KLL  E+K L +Q
Sbjct: 431 IAELQKGLNYTDATTTLRNEVTNLKNKLLATEQKSLDLQ 469


>AE014134-2628|AAF53479.1|  602|Drosophila melanogaster CG3938-PB,
           isoform B protein.
          Length = 602

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +3

Query: 12  YIFITIFDATKDICSNLHTAKMSLIGIRQIIPAATKYFRYPLTIGTFQYCTRTTSDPSNV 191
           Y+ +   D    +   +    + LIGI  +  AA     YP  IG F Y T       ++
Sbjct: 277 YLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDI 336

Query: 192 LN 197
           LN
Sbjct: 337 LN 338


>AE014134-2627|AAN10908.1|  709|Drosophila melanogaster CG3938-PE,
           isoform E protein.
          Length = 709

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +3

Query: 12  YIFITIFDATKDICSNLHTAKMSLIGIRQIIPAATKYFRYPLTIGTFQYCTRTTSDPSNV 191
           Y+ +   D    +   +    + LIGI  +  AA     YP  IG F Y T       ++
Sbjct: 384 YLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDI 443

Query: 192 LN 197
           LN
Sbjct: 444 LN 445


>AE014134-2626|AAN10907.1|  709|Drosophila melanogaster CG3938-PD,
           isoform D protein.
          Length = 709

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +3

Query: 12  YIFITIFDATKDICSNLHTAKMSLIGIRQIIPAATKYFRYPLTIGTFQYCTRTTSDPSNV 191
           Y+ +   D    +   +    + LIGI  +  AA     YP  IG F Y T       ++
Sbjct: 384 YLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDI 443

Query: 192 LN 197
           LN
Sbjct: 444 LN 445


>AE014134-2625|AAF53478.1|  709|Drosophila melanogaster CG3938-PC,
           isoform C protein.
          Length = 709

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +3

Query: 12  YIFITIFDATKDICSNLHTAKMSLIGIRQIIPAATKYFRYPLTIGTFQYCTRTTSDPSNV 191
           Y+ +   D    +   +    + LIGI  +  AA     YP  IG F Y T       ++
Sbjct: 384 YLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDI 443

Query: 192 LN 197
           LN
Sbjct: 444 LN 445


>AE014134-2624|AAF53477.1|  709|Drosophila melanogaster CG3938-PA,
           isoform A protein.
          Length = 709

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +3

Query: 12  YIFITIFDATKDICSNLHTAKMSLIGIRQIIPAATKYFRYPLTIGTFQYCTRTTSDPSNV 191
           Y+ +   D    +   +    + LIGI  +  AA     YP  IG F Y T       ++
Sbjct: 384 YLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDI 443

Query: 192 LN 197
           LN
Sbjct: 444 LN 445


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,967,081
Number of Sequences: 53049
Number of extensions: 605808
Number of successful extensions: 1780
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)