Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1105
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY596807-1|AAT42127.1|  634|Homo sapiens sodium-dependent amino ...    33   1.0  
AY591756-1|AAT66171.1|  634|Homo sapiens system B0 neutral amino...    33   1.0  
AB209296-1|BAD92533.1|  383|Homo sapiens syntaxin 16 isoform a v...    31   3.1  
BC068507-1|AAH68507.1|  778|Homo sapiens chromosome 11 open read...    31   4.1  
AK027207-1|BAB15691.1|  724|Homo sapiens protein ( Homo sapiens ...    31   4.1  
BC150249-1|AAI50250.1| 1589|Homo sapiens sterile alpha motif dom...    29   9.5  
BC132775-1|AAI32776.1| 1589|Homo sapiens sterile alpha motif dom...    29   9.5  
BC132773-1|AAI32774.1| 1589|Homo sapiens sterile alpha motif dom...    29   9.5  
AF445355-1|AAQ04637.1| 1589|Homo sapiens OEF1 protein.                 29   9.5  
AB095925-1|BAC23101.1| 1595|Homo sapiens KIAA2004 protein protein.     29   9.5  

>AY596807-1|AAT42127.1|  634|Homo sapiens sodium-dependent amino
           acid transporter protein.
          Length = 634

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = -1

Query: 157 LSVLKNFINIYVVILVSVLLGNR*ARHE*KCSNC*TLHVCNGFNQHKSDVTQ 2
           +S++  F ++YV I+V  ++G R  +    C +   L + NGF+  + +VTQ
Sbjct: 306 VSIINGFTSVYVAIVVYSVIGFRATQRYDDCFSTNILTLINGFDLPEGNVTQ 357


>AY591756-1|AAT66171.1|  634|Homo sapiens system B0 neutral amino
           acid transporter protein.
          Length = 634

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = -1

Query: 157 LSVLKNFINIYVVILVSVLLGNR*ARHE*KCSNC*TLHVCNGFNQHKSDVTQ 2
           +S++  F ++YV I+V  ++G R  +    C +   L + NGF+  + +VTQ
Sbjct: 306 VSIINGFTSVYVAIVVYSVIGFRATQRYDDCFSTNILTLINGFDLPEGNVTQ 357


>AB209296-1|BAD92533.1|  383|Homo sapiens syntaxin 16 isoform a
           variant protein.
          Length = 383

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 24/62 (38%), Positives = 33/62 (53%)
 Frame = +3

Query: 207 PMGRNLKLISKTECRQRVRSVQINRRCQPERSLNTLSSTKLITGSR*RPNMIPKMNSKKS 386
           P+GR+   +S  ECR  V +V  NR+ + ERS  TL+ +   TG         K N+KKS
Sbjct: 323 PLGRSSSCLSPLECRVPVCNVFANRK-KSERSSYTLACSVPGTGG--------KKNNKKS 373

Query: 387 TR 392
            R
Sbjct: 374 KR 375


>BC068507-1|AAH68507.1|  778|Homo sapiens chromosome 11 open reading
           frame 63 protein.
          Length = 778

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 18/80 (22%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = +3

Query: 189 TKAAALPMGRNLKLISKTECRQRVRSVQINRRCQPERSLNTLSSTKLITGSR*RPNMIPK 368
           TK++ +P G+   +++  +  +R   ++I ++C+ +  L + S+T+ +T S+   N  P+
Sbjct: 338 TKSSNVPRGQPSDMVNDHQPSRRPAKLKIRKQCKHQNGLKS-STTEEVTASQGNQNNPPR 396

Query: 369 -MNSKKSTRDSSLVKTKLVI 425
              ++    D+S     +VI
Sbjct: 397 QQQNQNKPLDTSTKPESIVI 416


>AK027207-1|BAB15691.1|  724|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23554 fis, clone LNG09359. ).
          Length = 724

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 18/80 (22%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = +3

Query: 189 TKAAALPMGRNLKLISKTECRQRVRSVQINRRCQPERSLNTLSSTKLITGSR*RPNMIPK 368
           TK++ +P G+   +++  +  +R   ++I ++C+ +  L + S+T+ +T S+   N  P+
Sbjct: 284 TKSSNVPRGQPSDMVNDHQPSRRPAKLKIRKQCKHQNGLKS-STTEEVTASQGNQNNPPR 342

Query: 369 -MNSKKSTRDSSLVKTKLVI 425
              ++    D+S     +VI
Sbjct: 343 QQQNQNKPLDTSTKPESIVI 362


>BC150249-1|AAI50250.1| 1589|Homo sapiens sterile alpha motif domain
           containing 9 protein.
          Length = 1589

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 1/99 (1%)
 Frame = +3

Query: 213 GRNLKLISKTECRQRVRSVQINRRCQPERSLNTLSSTKLITGSR*RPNMIPKMNSKKSTR 392
           G + K I+K +   R          +  ++       K     R  P ++  +   +   
Sbjct: 346 GTSSKDITKNKVDFRAFKADFKTLAESRKAAEEKFRAKTNKKEREGPKLVKLLTGNQDLL 405

Query: 393 DSSLVKTK-LVINACVVQQNNCFFFVRNHKWLLVCKFEP 506
           D+S  +   LV N C   Q     F++  KW  V +F+P
Sbjct: 406 DNSYYEQYILVTNKCHPDQTKHLDFLKEIKWFAVLEFDP 444


>BC132775-1|AAI32776.1| 1589|Homo sapiens sterile alpha motif domain
           containing 9 protein.
          Length = 1589

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 1/99 (1%)
 Frame = +3

Query: 213 GRNLKLISKTECRQRVRSVQINRRCQPERSLNTLSSTKLITGSR*RPNMIPKMNSKKSTR 392
           G + K I+K +   R          +  ++       K     R  P ++  +   +   
Sbjct: 346 GTSSKDITKNKVDFRAFKADFKTLAESRKAAEEKFRAKTNKKEREGPKLVKLLTGNQDLL 405

Query: 393 DSSLVKTK-LVINACVVQQNNCFFFVRNHKWLLVCKFEP 506
           D+S  +   LV N C   Q     F++  KW  V +F+P
Sbjct: 406 DNSYYEQYILVTNKCHPDQTKHLDFLKEIKWFAVLEFDP 444


>BC132773-1|AAI32774.1| 1589|Homo sapiens sterile alpha motif domain
           containing 9 protein.
          Length = 1589

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 1/99 (1%)
 Frame = +3

Query: 213 GRNLKLISKTECRQRVRSVQINRRCQPERSLNTLSSTKLITGSR*RPNMIPKMNSKKSTR 392
           G + K I+K +   R          +  ++       K     R  P ++  +   +   
Sbjct: 346 GTSSKDITKNKVDFRAFKADFKTLAESRKAAEEKFRAKTNKKEREGPKLVKLLTGNQDLL 405

Query: 393 DSSLVKTK-LVINACVVQQNNCFFFVRNHKWLLVCKFEP 506
           D+S  +   LV N C   Q     F++  KW  V +F+P
Sbjct: 406 DNSYYEQYILVTNKCHPDQTKHLDFLKEIKWFAVLEFDP 444


>AF445355-1|AAQ04637.1| 1589|Homo sapiens OEF1 protein.
          Length = 1589

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 1/99 (1%)
 Frame = +3

Query: 213 GRNLKLISKTECRQRVRSVQINRRCQPERSLNTLSSTKLITGSR*RPNMIPKMNSKKSTR 392
           G + K I+K +   R          +  ++       K     R  P ++  +   +   
Sbjct: 346 GTSSKDITKNKVDFRAFKADFKTLAESRKAAEEKFRAKTNKKEREGPKLVKLLTGNQDLL 405

Query: 393 DSSLVKTK-LVINACVVQQNNCFFFVRNHKWLLVCKFEP 506
           D+S  +   LV N C   Q     F++  KW  V +F+P
Sbjct: 406 DNSYYEQYILVTNKCHPDQTKHLDFLKEIKWFAVLEFDP 444


>AB095925-1|BAC23101.1| 1595|Homo sapiens KIAA2004 protein protein.
          Length = 1595

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 1/99 (1%)
 Frame = +3

Query: 213 GRNLKLISKTECRQRVRSVQINRRCQPERSLNTLSSTKLITGSR*RPNMIPKMNSKKSTR 392
           G + K I+K +   R          +  ++       K     R  P ++  +   +   
Sbjct: 352 GTSSKDITKNKVDFRAFKADFKTLAESRKAAEEKFRAKTNKKEREGPKLVKLLTGNQDLL 411

Query: 393 DSSLVKTK-LVINACVVQQNNCFFFVRNHKWLLVCKFEP 506
           D+S  +   LV N C   Q     F++  KW  V +F+P
Sbjct: 412 DNSYYEQYILVTNKCHPDQTKHLDFLKEIKWFAVLEFDP 450


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,439,910
Number of Sequences: 237096
Number of extensions: 1592687
Number of successful extensions: 2907
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2907
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)