Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1101
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    25   0.97 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   5.2  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   6.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   9.0  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   9.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.0  

>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 466 IRESNRYFFYNLDV*TSSPGVKQLPEPIEIYNVNASTHP 350
           I  +N Y  YN  +  +   ++Q+P P+ +Y  N    P
Sbjct: 323 IHNNNNYKNYNKKLYYNIINIEQIPVPVPVYCGNFPPRP 361


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 525 LADLKKNATKLVNSQLKISLYANLIGTFFI 436
           L +L+KN  KL N +L  SL A     FF+
Sbjct: 274 LMELQKNPQKLENIKLTDSLIAAQAFVFFL 303


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 257 PCGLTRRPNTIIKSSL 210
           PC LTRR   +I SSL
Sbjct: 187 PCQLTRRQGYVIYSSL 202


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 257 PCGLTRRPNTIIKSSL 210
           PC LTRR   +I SSL
Sbjct: 187 PCQLTRRQGYVIYSSL 202


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 257 PCGLTRRPNTIIKSSL 210
           PC LTRR   +I SSL
Sbjct: 187 PCQLTRRQGYVIYSSL 202


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 330 TVQQLPHPTNRNALLQKQAGWWY 262
           T+Q+  +PTNR+  +++Q    Y
Sbjct: 125 TLQRAEYPTNRSLFIREQTEEMY 147


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 269 GGTYPCGLTRRPNTIIKSSL 210
           GG  P GLT++   +++S++
Sbjct: 84  GGVGPNGLTKKQEMLVRSAI 103


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -1

Query: 296 THYCRSRQGGGTYPC 252
           T YC S+   G Y C
Sbjct: 216 TDYCNSKTNTGEYSC 230


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -1

Query: 296 THYCRSRQGGGTYPC 252
           T YC S+   G Y C
Sbjct: 216 TDYCNSKTNTGEYSC 230


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/23 (34%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 296 FRFVG-WGSCCTVKTETLLWVGG 361
           ++ VG W +   ++TE L+W  G
Sbjct: 418 YQVVGKWFNSLDIRTEELIWARG 440


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/23 (34%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 296 FRFVG-WGSCCTVKTETLLWVGG 361
           ++ VG W +   ++TE L+W  G
Sbjct: 508 YQVVGKWFNSLDIRTEELIWARG 530


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,743
Number of Sequences: 438
Number of extensions: 4025
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)