Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1098
(661 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 386 e-108
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 342 3e-95
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 153 3e-38
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 152 4e-38
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 134 8e-33
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 111 9e-26
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 109 3e-25
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 105 6e-24
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 100 2e-22
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 100 4e-22
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 96 5e-21
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 94 1e-20
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 92 6e-20
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 91 1e-19
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 90 2e-19
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 86 4e-18
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 82 6e-17
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 75 1e-14
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 71 2e-13
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 70 3e-13
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 64 2e-11
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 62 5e-11
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 59 6e-10
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 32 0.064
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 32 0.064
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 31 0.11
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 30 0.34
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 29 0.78
SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.0
SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3 |Schi... 27 2.4
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 27 2.4
SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 27 2.4
SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar... 26 4.2
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 25 7.3
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 25 7.3
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 25 7.3
SPBC19G7.09 |ulp1||SUMO deconjugating enzyme Ulp1|Schizosaccharo... 25 7.3
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 25 7.3
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 25 9.7
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 25 9.7
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 386 bits (951), Expect = e-108
Identities = 174/217 (80%), Positives = 204/217 (94%)
Frame = +1
Query: 10 SSAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 189
+ AQSGTGKTATFSI ILQ++D ++R+TQ LILSPTRELA QIQ V+LALGD MNVQCHA
Sbjct: 63 AQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHA 122
Query: 190 CIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKE 369
CIGGT++G DI+KLDYGQHVVSGTPGRV DMIRRR LRTR++KML+LDEADE+LN+GFKE
Sbjct: 123 CIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKE 182
Query: 370 QIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVE 549
QIYD+YRYLPP TQVV++SATLP ++LEMT+KF T+P+RILVKRDELTLEG+KQ+F+AVE
Sbjct: 183 QIYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVE 242
Query: 550 REEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQK 660
+EEWKFDTLCDLYDTLTITQAVIFCN++RKVDWLT+K
Sbjct: 243 KEEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEK 279
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 342 bits (840), Expect = 3e-95
Identities = 154/217 (70%), Positives = 192/217 (88%)
Frame = +1
Query: 10 SSAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 189
+ AQSGTGKTATFSIS+LQ +DT+L++ Q LIL+PTRELA QIQKV++ALGD MNV+CHA
Sbjct: 61 AQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHA 120
Query: 190 CIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKE 369
CIGGT + +D+ L G HVV GTPGRV DMI+RR L T +++M VLDEADEML++GFK+
Sbjct: 121 CIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKD 180
Query: 370 QIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVE 549
QIYD+++ LPP QVVL+SAT+P ++LE+T+KFM DPIRILVK+DELTLEGIKQF+VAVE
Sbjct: 181 QIYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVE 240
Query: 550 REEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQK 660
+EEWK DTLCDLY+T+T+TQAVIFCNT+RKVDWLT++
Sbjct: 241 KEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQ 277
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 153 bits (370), Expect = 3e-38
Identities = 87/215 (40%), Positives = 120/215 (55%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACI 195
A++GTGKTA F I L+ +DT + Q LIL PTRELA Q +V LG MNV+
Sbjct: 88 AKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTT 147
Query: 196 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQI 375
GGT L +DI +L+ H+V GTPGRV D+ + V V+DEAD++L+ F I
Sbjct: 148 GGTTLRDDIIRLNDTVHIVVGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPII 207
Query: 376 YDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVERE 555
+ Y P Q+ L SAT P + K + P I + DELTL G+ Q++ V+ E
Sbjct: 208 EQLLSYFPKNRQISLYSATFPLIVKNFMDKHLNKPYEINL-MDELTLRGVTQYYAFVD-E 265
Query: 556 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQK 660
K L L+ L I Q++IFCN+ +V+ L +K
Sbjct: 266 SQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKK 300
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 152 bits (369), Expect = 4e-38
Identities = 82/216 (37%), Positives = 130/216 (60%), Gaps = 1/216 (0%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACI 195
+QSGTGKTA F++++L +D ++ + Q + L+P+RELA QI V+ +G + V+
Sbjct: 160 SQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEVK--TAF 217
Query: 196 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-GFKEQ 372
G + K+D +V GTPG V D+++RR L R IK+ VLDEAD ML++ G +Q
Sbjct: 218 GIKDSVPKGAKID--AQIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQ 275
Query: 373 IYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVER 552
+ LP TQ+VL SAT + + +F + I +K +EL++EGIKQ ++ +
Sbjct: 276 SMRIKHLLPRNTQIVLFSATFSERVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQS 335
Query: 553 EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQK 660
EE K++ L +LY LTI Q++IFC K + + ++
Sbjct: 336 EEHKYNVLVELYGLLTIGQSIIFCKKKDTAEEIARR 371
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 134 bits (325), Expect = 8e-33
Identities = 80/218 (36%), Positives = 125/218 (57%), Gaps = 6/218 (2%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHAC 192
A+SG GKTA F +S LQ ++ E VL+L TRELA QI+ ++ +V+
Sbjct: 95 AKSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVF 154
Query: 193 IGGTNLGEDI---RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNK-G 360
GG N+ +D+ + H+V TPGR+ ++R ++L+ S+K VLDE D++L
Sbjct: 155 YGGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVD 214
Query: 361 FKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFF 537
+ I +V+R PP QV++ SATL +EI + KFM +P+ I V + +LTL G++Q +
Sbjct: 215 MRRDIQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHY 274
Query: 538 VAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWL 651
V +E E+ K + DL D+L Q VIF + + + L
Sbjct: 275 VKLE-EKAKNRKINDLLDSLEFNQVVIFVKSVSRANEL 311
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 111 bits (267), Expect = 9e-26
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 2/198 (1%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTLDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHA 189
A++G+GKTA F I +++ L +TL T+ LILSP RELA Q KV+ +++ A
Sbjct: 113 ARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVA 172
Query: 190 CIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKE 369
+GG +L E L +V TPGR + L SI+ +V DEAD + GF
Sbjct: 173 IVGGVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAA 232
Query: 370 QIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVE 549
Q+ ++ LP + Q +L SATLP +++ + DP+ + + + ++ F +V+
Sbjct: 233 QLTEILHALPTSRQTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKVSADLQSAFFSVK 292
Query: 550 REEWKFDTLCDLYDTLTI 603
E + LC L D + +
Sbjct: 293 TAEREAALLCILQDIIKL 310
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 109 bits (263), Expect = 3e-25
Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 6/213 (2%)
Frame = +1
Query: 13 SAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 183
+A +G+GKTA F + IL+ L + T+VLIL PTRELA Q V + F ++
Sbjct: 302 AAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMV 361
Query: 184 HACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKG 360
CIGG +L ++L +V TPGR D +R + +I+++V+DEAD ML G
Sbjct: 362 CLCIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDG 421
Query: 361 FKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFV 540
F +++ ++ + P + Q +L SAT+ ++ ++ + P+R+ V + T + + Q FV
Sbjct: 422 FADELNEIIQACPKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFV 481
Query: 541 AV--EREEWKFDTLCDLYDTLTITQAVIFCNTK 633
V +RE + L L L + +IF +K
Sbjct: 482 RVRPQRELLRPAMLIYLCKELFHRRTIIFFRSK 514
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 105 bits (252), Expect = 6e-24
Identities = 71/220 (32%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Frame = +1
Query: 22 SGTGKTATFSISIL-----QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 186
+G+GKT ++ + + Q L + VL+L+PTRELA QIQ+ G ++
Sbjct: 168 TGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNT 227
Query: 187 ACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFK 366
GG G IR L G + TPGR+ DM+ R + LVLDEAD ML+ GF+
Sbjct: 228 CVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFE 287
Query: 367 EQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILV-KRDELTLEGIKQFFVA 543
QI + + P Q V+ SAT P E+ + ++ D I++ V D IKQ
Sbjct: 288 PQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEV 347
Query: 544 VEREEWKFDTLCDLYDTL--TITQAVIFCNTKRKVDWLTQ 657
V+ + + D+ + L + +IF TKR D +T+
Sbjct: 348 VDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVADDITR 387
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 100 bits (239), Expect = 2e-22
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 186
A++G+GKT F I LQ L+ +VL++SPTRELA Q + + +L N++
Sbjct: 209 AETGSGKTVAFGIPALQYLNGLSDNKSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAV 268
Query: 187 ACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFK 366
GG E R V+ GTPGR+ D+I + + LVLDEAD ML+ GF+
Sbjct: 269 VVYGGAPKSEQARAAKNAS-VIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFE 327
Query: 367 EQIYDVYRYLPPAT-----QVVLISATLPHEILEMTSKFMTDPIRILVKRDEL 510
+ I ++ + P T Q V SAT P + + + F+ DP++I + DEL
Sbjct: 328 QDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDEL 380
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 99.5 bits (237), Expect = 4e-22
Identities = 72/190 (37%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Frame = +1
Query: 100 LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD 279
LIL+PTREL QI + V+ A GG ++ IR++D G ++S TPGR+ D
Sbjct: 259 LILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVD 318
Query: 280 MIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT----QVVLISATLPHEI 447
+I R + +IK LVLDEAD ML+ GF+ QI + + Q ++ SAT P +I
Sbjct: 319 LIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDI 378
Query: 448 LEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFC 624
+ F+ D + + V R T E I Q V VE E K L D+ TL +IF
Sbjct: 379 QLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSE-KRSYLLDILHTLPPEGLTLIFV 437
Query: 625 NTKRKVDWLT 654
TKR D LT
Sbjct: 438 ETKRMADTLT 447
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 95.9 bits (228), Expect = 5e-21
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 12/224 (5%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTL--DTTLRETQ---VLILSPTRELATQIQKVILALGDFMNVQ 180
A++G+GKT F + + + + L+ + +I++PTRELA QI + +N++
Sbjct: 462 AKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIR 521
Query: 181 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR---RVLRTRSIKMLVLDEADEML 351
GG + + I L G +V TPGR+ D++ RV LVLDEAD M
Sbjct: 522 ACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMF 581
Query: 352 NKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 531
+ GF+ Q+ + + P Q VL SAT P + + K + P+ I V + ++Q
Sbjct: 582 DLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQ 641
Query: 532 FFVAVEREEWKF----DTLCDLYDTLTITQAVIFCNTKRKVDWL 651
V V EE KF + L +LY+ + ++F + + D L
Sbjct: 642 -IVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESADAL 684
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 94.3 bits (224), Expect = 1e-20
Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 1/206 (0%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACI 195
AQ+G+GKTA F++ ++Q L ++L+PTRELA QI + A+G + V+ +
Sbjct: 90 AQTGSGKTAAFALPVIQELWNNPSPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIV 149
Query: 196 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNKGFKEQ 372
GG ++ L HV+ TPGR+ D + + +++K L++DEAD +L+ F
Sbjct: 150 GGMDMVTQAVALSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPI 209
Query: 373 IYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVER 552
I + + +P + +L SAT+ ++ ++ + P+R+ V T++ + Q ++
Sbjct: 210 IDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYLFFPF 269
Query: 553 EEWKFDTLCDLYDTLTITQAVIFCNT 630
+ K L L + L +IF T
Sbjct: 270 KH-KDTYLVYLVNELAGNSIIIFART 294
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 92.3 bits (219), Expect = 6e-20
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 7/217 (3%)
Frame = +1
Query: 13 SAQSGTGKTATFSISILQTLD----TTLRETQVLILSPTRELATQIQKVILALGDFMNVQ 180
+A++G+GKT F + +++ L T+L L++SPTRELA Q + ++ +G +
Sbjct: 82 AAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGRLHSFS 141
Query: 181 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRV-LRTRSIKMLVLDEADEMLNK 357
IGG N E+ +L +++ TPGR+ I + V T ++ML+LDEAD +L+
Sbjct: 142 AGLIIGGNNYKEEKERLSR-MNILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDM 200
Query: 358 GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL--TLEGIKQ 531
GF+ + + LP Q +L SAT + ++ + +P I V ++ T + Q
Sbjct: 201 GFRTTLDAIVSSLPVHRQTMLFSATQTKSVKDLARLSLQNPDFISVHENDTSSTPSNLNQ 260
Query: 532 FFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKV 642
F++ V E K D L T + ++F ++ ++V
Sbjct: 261 FYLTVPLTE-KLDILFGFIRTHLKFKTIVFLSSCKQV 296
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 91.1 bits (216), Expect = 1e-19
Identities = 55/153 (35%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACI 195
A++G+GKTA F++ I++ LIL+PTRELA QI + ALG +N++ +
Sbjct: 51 AKTGSGKTAAFALPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIV 110
Query: 196 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIR----RRVLRTRSIKMLVLDEADEMLNKGF 363
GG ++ L HVV TPGR+ D+IR + R IK LV+DEAD +L+ F
Sbjct: 111 GGMDMIRQSIDLSKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTF 170
Query: 364 KEQIYDVYRYLPPA--TQVVLISATLPHEILEM 456
+ + D + LP + Q +L +AT+ I ++
Sbjct: 171 ADDLDDCFSVLPASEDRQTLLFTATVTDAIRQL 203
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 90.2 bits (214), Expect = 2e-19
Identities = 59/243 (24%), Positives = 118/243 (48%), Gaps = 28/243 (11%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTLDTT--LRETQV------LILSPTRELATQIQKVILALGDFM 171
A++G+GKTA F I ++ + L E+ + ++L+PTRELA QIQ + +
Sbjct: 293 AETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPL 352
Query: 172 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEML 351
+C + +GG E ++ G H+V TPGR+ D + RR+ +V+DEAD ML
Sbjct: 353 GFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRML 412
Query: 352 NKGFKEQIYDVYRYLPPAT-------------------QVVLISATLPHEILEMTSKFMT 474
+ GF++ + + LP + Q ++ SATLP + + ++
Sbjct: 413 DMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSYLI 472
Query: 475 DPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWL 651
+P+ + + ++ ++Q + + K+ + ++ ++ + +IF N KR ++ +
Sbjct: 473 EPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEILESNRFSPPIIIFVNLKRNIEAI 532
Query: 652 TQK 660
++
Sbjct: 533 AKQ 535
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 86.2 bits (204), Expect = 4e-18
Identities = 65/224 (29%), Positives = 118/224 (52%), Gaps = 9/224 (4%)
Frame = +1
Query: 13 SAQSGTGKTATF---SISILQTLDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQ 180
+A++G+GKT F +I +L L R T V+I+SPTRELA QI V L + +
Sbjct: 132 AAKTGSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQT 191
Query: 181 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLNK 357
IGG N + KL G +++ TPGR+ D ++ + R+++ LV+DEAD +L
Sbjct: 192 FGIVIGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEI 251
Query: 358 GFKEQIYDVYRYLPPAT-QVVLISATLPHEILEMTS-KFMTDPIRILVK--RDELTLEGI 525
GF++++ + + LP Q +L SAT ++ ++ P+ + V + T+EG+
Sbjct: 252 GFEDEMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGL 311
Query: 526 KQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQ 657
+Q +V V+ ++ +F L + ++F ++ V ++ +
Sbjct: 312 EQGYVVVDSDK-RFLLLFSFLKRNLKKKVIVFMSSCASVKYMAE 354
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 82.2 bits (194), Expect = 6e-17
Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Frame = +1
Query: 10 SSAQSGTGKTATFSISILQTL------DTTLRETQVLILSPTRELATQIQKVILALGDFM 171
+ A++G+GKTA + I IL+ L D R L+L PTRELA Q+ V+ L F
Sbjct: 56 AQARTGSGKTAAYLIPILELLLKQKQIDENQRGIFALLLVPTRELAQQVYNVLEKLTAFC 115
Query: 172 NVQCHACIGGTNLGEDIRK---LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEAD 342
+ TN + +++ LD V++ TP R + VL +K LV+DEAD
Sbjct: 116 SKHIRFINVATNSSDTVQRPLLLDLPDIVIA-TPSRCVVHVASGVLPLDKLKFLVIDEAD 174
Query: 343 EMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDE 507
ML+ G+ E + + R LP TQ L+SATL I + +P + VK E
Sbjct: 175 LMLSFGYNEDMKTLSRSLPRGTQSFLMSATLSKNIASLQKLVCRNPFILAVKDKE 229
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 74.5 bits (175), Expect = 1e-14
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTL--DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 189
A +G+GKT F I IL+ + + Q L+++PTRELA QI + + N++ +
Sbjct: 166 ADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPTRELAHQICQHFELIKPSPNIRVMS 225
Query: 190 CIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVL--RTRSIKMLVLDEADEMLNKGF 363
GG + + R L+ HVV TPGR++ +I L + IK LVLDEAD +L K
Sbjct: 226 ITGGLAVQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSH 285
Query: 364 KEQIYDVYRYL--PPAT--QVVLISATLPHEILEMTSKFM 471
E++ + L P T Q + SAT + + K M
Sbjct: 286 FEELSKLLEILGNPMHTQRQTFIFSATFDEGLQQRLKKNM 325
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 70.5 bits (165), Expect = 2e-13
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 13/172 (7%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQ-------TLDTTLRETQVLILSPTRELATQIQKVILALGD--- 165
AQ+G+GKT + + I+Q L T +I++PTREL QI V L +
Sbjct: 185 AQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPTRELCQQIYNVANKLNNNPL 244
Query: 166 -FMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEA 339
V C+ IGG + ++ G +++ GTPGR+ D + L ++ +VLDE
Sbjct: 245 SHWIVSCNV-IGGEKKKSEKARIRKGVNILIGTPGRLADHLENTEALDVSQVRWVVLDEG 303
Query: 340 DEMLNKGFKEQIYDVYRYLPPATQVVLISATLP-HEILEMTSKFMTDPIRIL 492
D +++ GF+E + + YL + ++ ++P ++ + S M D ++ L
Sbjct: 304 DRLMDMGFEETLTKILSYLESQSSIIKKDLSIPSRKVTMLCSATMKDTVKRL 355
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 69.7 bits (163), Expect = 3e-13
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 15/227 (6%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTL---DTTLRETQV--LILSPTRELATQIQKVILALGDFMNVQ 180
A++GTGKT F + + + L +++ +ILSPTRELA QI + L ++
Sbjct: 83 AKTGTGKTLAFLLVAFKDVLKGKPRLNSSKIHSVILSPTRELALQIFEEARKLTYGTGIR 142
Query: 181 CHACIGGTNLGEDIRKLDYGQ-HVVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEMLN 354
IGG + + + G +++ TPGR+ D ++ R+L + S +LDEAD +++
Sbjct: 143 VSYAIGGNSKMREENAIRRGNANLLIATPGRLEDHLQNPRILESLSTDSFILDEADRLMD 202
Query: 355 KGFKEQIYDVYRYLPPA-TQVVLISATLPHEILEMTSKFM-TD--PIRILVKRDELTLEG 522
GF E I +++ + T+ + SAT+P ++ + + TD I L + T E
Sbjct: 203 MGFAESILNIHEAVTTTKTRKLCFSATMPPKVSNVFRGILGTDFKLINCLDPNEPPTHER 262
Query: 523 IKQFFVAVEREEWKFDTLCDLYDTLT----ITQAVIFCNTKRKVDWL 651
+ QF + + ++ F + L LT ++ ++F T VD++
Sbjct: 263 VPQFVIETKLDK-VFSSSLSLLQQLTSSNPSSRIIVFLPTISMVDFV 308
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 64.1 bits (149), Expect = 2e-11
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTLDTTLRET-QVLILSPTRELATQI--QKVILALGDFMNVQCH 186
A +G+GKT + ILQ L + + +I++PTREL QI Q L+ G + +
Sbjct: 90 APTGSGKTIAYLFPILQKLQLHVPGGYRAIIVAPTRELCEQIYRQAEKLSFGTSLKI-IE 148
Query: 187 ACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFK 366
+ E KL + GTP R+ I+ L ++ V+DEAD + GF
Sbjct: 149 LSKSNEKIQEKAPKLREKYDMCIGTPMRLVQAIQTG-LSFEKVEFFVMDEADRLFEPGFI 207
Query: 367 EQIYDVYRYLPPATQVV-LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 531
EQ + + L SAT+P + E+ DPIRI+V + + I Q
Sbjct: 208 EQTDHILSACTSSNICKSLFSATIPSRVEELAKVVTVDPIRIIVGLKDAATDSIDQ 263
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 62.5 bits (145), Expect = 5e-11
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 13/153 (8%)
Frame = +1
Query: 16 AQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQI---QKVILA-----LG 162
A +G+GKT + + + DT LI++PTRELATQI K +LA L
Sbjct: 45 AVTGSGKTLAYLLPCFDKVTRRDTDETGLGALIVAPTRELATQIFNVTKELLAYQPDSLD 104
Query: 163 DFMNVQCHACIGGTN-LGEDIRKL-DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDE 336
+ IGG L D+ + VV GTPGR+ +M+ + ++ +++L+LDE
Sbjct: 105 GGKKLVADMYIGGKGTLTNDLASFREKNPSVVIGTPGRLNEMLSH--ISSKHLEILILDE 162
Query: 337 ADEMLNKGFKEQIYDVYRYLPPATQVVLISATL 435
AD +++ GF+ + + LP + L SAT+
Sbjct: 163 ADTLIDMGFQRTLQSIISQLPKQRRTGLFSATM 195
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 58.8 bits (136), Expect = 6e-10
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Frame = +1
Query: 13 SAQSGTGKTATFSISILQTLD-TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 189
SA +G+GKT ++ I I+Q L T+ + +++ PTREL Q+ K +Q A
Sbjct: 179 SAATGSGKTLSYVIPIVQCLSHRTVPRLRCVVIVPTRELTVQVAKTFEYYMSGAGLQVCA 238
Query: 190 CIGGTNLGEDIRKLDYGQH-----VVSGTPGRVFDMIRR-RVLRTRSIKMLVLDEADEML 351
G +L + +L+ ++ V+ TPGR+ D IR + ++ +V+DEAD +L
Sbjct: 239 WTGQKSLRHETYQLNGDENECRIDVLVSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLL 298
Query: 352 NKGFKEQI 375
++ F++ +
Sbjct: 299 DQSFQDWV 306
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 32.3 bits (70), Expect = 0.064
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = +1
Query: 322 LVLDEADEMLNKG-FKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVK 498
+V+DEA +L G ++ + R + L+SAT P + LEM ++ T V
Sbjct: 1319 VVIDEAHLLLTSGAWRTALSRASRLSGLYAPLHLLSATFPRQ-LEMVAR-QTFCTNFYVL 1376
Query: 499 RDELTL-EGIKQFFVAVEREEWKFDTLCDLYDTLTIT---QAVIFCNTKRKVDWLTQK 660
R+ T E I F + E+ D + T +A+IFC TK+ V+++ ++
Sbjct: 1377 RETSTARENIFYFLHPYDNTEFLLDLRTLMKRTKVFEGDGRAIIFCRTKKDVEYIHRR 1434
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 32.3 bits (70), Expect = 0.064
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = +1
Query: 322 LVLDEADEMLNKG-FKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVK 498
+V+DEA +L G ++ + R + L+SAT P + LEM ++ T V
Sbjct: 1319 VVIDEAHLLLTSGAWRTALSRASRLSGLYAPLHLLSATFPRQ-LEMVAR-QTFCTNFYVL 1376
Query: 499 RDELTL-EGIKQFFVAVEREEWKFDTLCDLYDTLTIT---QAVIFCNTKRKVDWLTQK 660
R+ T E I F + E+ D + T +A+IFC TK+ V+++ ++
Sbjct: 1377 RETSTARENIFYFLHPYDNTEFLLDLRTLMKRTKVFEGDGRAIIFCRTKKDVEYIHRR 1434
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 31.5 bits (68), Expect = 0.11
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Frame = +1
Query: 1 HEDSSAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM--- 171
H S + +GK+ + I ILQ+L + T + PT+ LA +K ++ + +M
Sbjct: 328 HVIVSTSTSSGKSLIYQIPILQSLLEDNQSTAFFVF-PTKSLAQDQKKSLIDILSYMPTL 386
Query: 172 -NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLR----TRSIKMLVLDE 336
N++ G T L E + +++ P + I R +++K+ VLDE
Sbjct: 387 KNIRVDTFDGDTPL-ESRESIIRSANIIFTNPDMLHQTILPNANRWYYFFKNLKLFVLDE 445
Query: 337 A 339
A
Sbjct: 446 A 446
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 29.9 bits (64), Expect = 0.34
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 235 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 411
YGQ+ + P + + +L + +V D+ D+ ++ E + ++RYLPP +
Sbjct: 467 YGQYDIRKDPHQNI-ALPDSMLSRFDLLFIVTDDIDDKKDRALSEHVLRMHRYLPPGVE 524
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 28.7 bits (61), Expect = 0.78
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 418 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 597
LIS TL + + F+ D + L K D+ +EG ++++ E+ + C LY TL
Sbjct: 1024 LISLTLKDSDVCVIYNFVDDLVIFLKKCDKTLIEGFVLPILSIKIEKSLYKGFCYLYLTL 1083
Query: 598 TI 603
+
Sbjct: 1084 KV 1085
>SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 266
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/79 (21%), Positives = 33/79 (41%)
Frame = +1
Query: 334 EADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELT 513
E E + + + I +YRY + L + LP + S +T+P++ ++
Sbjct: 94 ENSEFTKENYAQMINSLYRYQDAILKSELKDSILPKLVNCACSVQLTEPLKAILANSRGE 153
Query: 514 LEGIKQFFVAVEREEWKFD 570
LE + + EE K +
Sbjct: 154 LENSLLLRIQAQEEELKMN 172
>SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 606
Score = 27.1 bits (57), Expect = 2.4
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Frame = +1
Query: 13 SAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHAC 192
S +G+GKTA F I Q LIL +ELA Q K C
Sbjct: 52 SLATGSGKTALFPHFIKYAPTLRPNSEQCLILVHRKELALQALK-----------HCRES 100
Query: 193 IGGTNLGEDIRKLDYGQHVVSG----TPGRVFDMIRRRVLRTR--SIKMLVLDEADEMLN 354
+ ++ ++D G SG T VF + R+L+ + K+L+ DE M +
Sbjct: 101 LPNKSI-----EIDMGNQCASGLADVTVASVFSLKNERLLKYNPLNFKLLIFDEVHHMAS 155
Query: 355 KGF 363
+
Sbjct: 156 PSY 158
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 286 RRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLP 399
RR L+ I V +A + ++ G + D YRY P
Sbjct: 458 RRSALKFTDIDYFVFSDASKYVSIGMSPYMRDTYRYTP 495
>SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 627 ITKYYCLGNCQCIIEVTKCVK 565
+ ++ CL NC + +TKCVK
Sbjct: 139 LEEFSCLANCNGLRTITKCVK 159
>SPAC1786.01c ||SPAC31G5.20c|triacylglycerol
lipase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 553 EEWKFDTLCDLYDTLTITQAVIFCNTKRK--VDW 648
+EWK D + D YD T+ QAV K + DW
Sbjct: 143 DEWKLDPVYDYYD-YTLVQAVYSSLVKHREQKDW 175
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 280 MIRRRVLRTRSIKMLVLDEADEM--LNKGFKEQIYDVYRYLPPATQVVLISATLPH 441
M+ R R ++ ++ DE + L +G + +V LPP ++L+SAT+P+
Sbjct: 376 MLYRGADLIRDVEFVIFDEVHYVNDLERGVVWE--EVIIMLPPHVTLILLSATVPN 429
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 469 MTDPIRILVKRDELTLEGIKQFFVAVEREEW 561
+TDP R V++++LT G+ + A + + W
Sbjct: 65 LTDPARNFVEKEDLTALGVNVYNNADDWKNW 95
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 7.3
Identities = 17/92 (18%), Positives = 39/92 (42%)
Frame = +1
Query: 331 DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL 510
D D +G + +++Y Y T ++ L ++ S ++TDP ++ +
Sbjct: 90 DIPDGTEQEGLSDDEHEIYAYFETPTTEKAVTEQLAEKLCVDASGYVTDPSNLIER--SY 147
Query: 511 TLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 606
T+ + ++ E W+ + L+ TI+
Sbjct: 148 TIHSKRFSIKSIISELWEKEGARGLWKGHTIS 179
>SPBC19G7.09 |ulp1||SUMO deconjugating enzyme
Ulp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 568
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +1
Query: 169 MNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIR 288
+++ H C+ N + ++ +Y + +G+PG+VFD++R
Sbjct: 458 VHLDVHWCMAVINKSK--KRFEYWDSL-AGSPGKVFDLLR 494
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 25.4 bits (53), Expect = 7.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -1
Query: 490 ISLLDQS*TLMSFPISHGVVLLILAQPELQEADSGIHHKFAL*NLCSTSHQPHQEPASLL 311
+SLL S +S P + L++ P+L+ +D + F + + ++P+ E A+ +
Sbjct: 1893 LSLLTDSVLHVSAPTDMQTLKLLMVDPKLKNSDDRLAGFFEIPDE-DGWYEPNSEYAAAI 1951
Query: 310 TGFSTHA 290
T + HA
Sbjct: 1952 TKSNVHA 1958
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 424 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFV 540
SA LP+EI++ ++ + DP + L + +E I+ F +
Sbjct: 932 SAMLPYEIIDYVNRALDDP-KFLTNCNRDFIETIRTFVI 969
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 25.0 bits (52), Expect = 9.7
Identities = 21/99 (21%), Positives = 43/99 (43%)
Frame = +1
Query: 352 NKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ 531
NK +++Y+ Y L +V I E S +M+ ++ V D+LT+ +K+
Sbjct: 272 NKLDYKKLYEKYSALIEKYPIVFIEDPFSEEDWGAFS-YMSSKTKVEVIADDLTVTNVKR 330
Query: 532 FFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDW 648
A+E + L + ++++ + N +K W
Sbjct: 331 LSKAIEL-KCANALLVKINQIGSLSETIDAANMAKKAGW 368
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,739,459
Number of Sequences: 5004
Number of extensions: 56832
Number of successful extensions: 222
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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