Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1095
(595 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69719-2|CAI95605.1| 108|Homo sapiens polymerase (RNA) III (DNA... 115 1e-25
DQ431198-2|ABD95903.1| 108|Homo sapiens DNA-directed RNA polyme... 115 1e-25
BC011932-1|AAH11932.1| 108|Homo sapiens polymerase (RNA) III (D... 115 1e-25
AF126531-1|AAD31424.1| 108|Homo sapiens putative DNA-directed R... 115 1e-25
AF060223-1|AAG43123.1| 108|Homo sapiens My010 protein protein. 115 1e-25
AF051316-1|AAF18268.1| 108|Homo sapiens RNA polymerase III subu... 115 1e-25
AE006462-2|AAK61210.1| 108|Homo sapiens RNA polymerase III subu... 115 1e-25
BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongatio... 45 2e-04
AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongatio... 45 2e-04
AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongatio... 45 2e-04
AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongatio... 45 2e-04
X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation ... 44 3e-04
X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation ... 44 3e-04
M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation ... 44 3e-04
CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein. 44 3e-04
BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongatio... 44 3e-04
BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongatio... 44 3e-04
D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation ... 43 7e-04
CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein. 43 7e-04
BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongatio... 43 7e-04
AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongatio... 43 7e-04
AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongatio... 43 7e-04
AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongatio... 43 7e-04
X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation ... 43 0.001
Z23102-1|CAA80649.1| 125|Homo sapiens RNA Polymerase II subunit... 40 0.005
BC067794-1|AAH67794.1| 125|Homo sapiens polymerase (RNA) II (DN... 40 0.005
BC017112-1|AAH17112.1| 125|Homo sapiens polymerase (RNA) II (DN... 40 0.005
AD001527-2|AAB51181.1| 125|Homo sapiens HUMAN DNA-DIRECTED RNA ... 40 0.005
CR457109-1|CAG33390.1| 126|Homo sapiens ZNRD1 protein. 40 0.007
BX088647-3|CAI95579.1| 126|Homo sapiens zinc ribbon domain cont... 40 0.007
BC050608-1|AAH50608.1| 126|Homo sapiens zinc ribbon domain cont... 40 0.007
BC010898-1|AAH10898.1| 126|Homo sapiens zinc ribbon domain cont... 40 0.007
AL845439-2|CAI18538.1| 126|Homo sapiens zinc ribbon domain cont... 40 0.007
AL671859-2|CAI17577.1| 126|Homo sapiens zinc ribbon domain cont... 40 0.007
AL669914-2|CAI18176.1| 126|Homo sapiens zinc ribbon domain cont... 40 0.007
AF230338-1|AAG50160.1| 126|Homo sapiens nuclear RNA polymerase ... 40 0.007
AF230337-1|AAG50159.1| 126|Homo sapiens nuclear RNA polymerase ... 40 0.007
AF024617-1|AAF40469.1| 126|Homo sapiens transcription-associate... 40 0.007
AB202082-1|BAE78600.1| 126|Homo sapiens zinc ribbon domain cont... 40 0.007
AF233442-1|AAF61308.1| 381|Homo sapiens NEDD8-specific protease... 32 1.8
BC090946-1|AAH90946.1| 565|Homo sapiens ubiquitin specific pept... 31 4.1
BC003130-1|AAH03130.2| 477|Homo sapiens USP21 protein protein. 31 4.1
AL590714-3|CAH72142.1| 551|Homo sapiens ubiquitin specific pept... 31 4.1
AL590714-2|CAH72143.1| 565|Homo sapiens ubiquitin specific pept... 31 4.1
AF217979-1|AAG17222.1| 550|Homo sapiens unknown protein. 31 4.1
AF177758-1|AAD54321.1| 565|Homo sapiens ubiquitin specific prot... 31 4.1
L13977-1|AAA99891.1| 496|Homo sapiens prolylcarboxypeptidase pr... 30 7.1
BC001500-1|AAH01500.1| 496|Homo sapiens prolylcarboxypeptidase ... 30 7.1
AK131215-1|BAD18404.1| 543|Homo sapiens protein ( Homo sapiens ... 29 9.4
>Z69719-2|CAI95605.1| 108|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide K, 12.3 kDa protein.
Length = 108
Score = 115 bits (276), Expect = 1e-25
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 375 LQELDYIMGGAAAWENVDSTDAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHN 554
L+E+D ++GGAAAWENVDST CPKC + RAYFMQLQTRSADEPMTTFY+CCN +C H
Sbjct: 46 LKEVDDVLGGAAAWENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHR 105
Query: 555 WRD 563
WRD
Sbjct: 106 WRD 108
Score = 67.7 bits (158), Expect = 3e-11
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +1
Query: 172 MLFCPTCANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLK 312
+LFCP C N L+VEEG + R++CNTCPYV+NI +KV++R +PKLK
Sbjct: 2 LLFCPGCGNGLIVEEG-QRCHRFSCNTCPYVHNITRKVTNRKYPKLK 47
>DQ431198-2|ABD95903.1| 108|Homo sapiens DNA-directed RNA
polymerases III 12.5 kDa polypeptide protein.
Length = 108
Score = 115 bits (276), Expect = 1e-25
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 375 LQELDYIMGGAAAWENVDSTDAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHN 554
L+E+D ++GGAAAWENVDST CPKC + RAYFMQLQTRSADEPMTTFY+CCN +C H
Sbjct: 46 LKEVDDVLGGAAAWENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHR 105
Query: 555 WRD 563
WRD
Sbjct: 106 WRD 108
Score = 68.9 bits (161), Expect = 1e-11
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +1
Query: 172 MLFCPTCANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLK 312
+LFCP C N L+VEEG + R+ACNTCPYV+NI +KV++R +PKLK
Sbjct: 2 LLFCPGCGNGLIVEEG-QRCHRFACNTCPYVHNITRKVTNRKYPKLK 47
>BC011932-1|AAH11932.1| 108|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide K, 12.3 kDa protein.
Length = 108
Score = 115 bits (276), Expect = 1e-25
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 375 LQELDYIMGGAAAWENVDSTDAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHN 554
L+E+D ++GGAAAWENVDST CPKC + RAYFMQLQTRSADEPMTTFY+CCN +C H
Sbjct: 46 LKEVDDVLGGAAAWENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHR 105
Query: 555 WRD 563
WRD
Sbjct: 106 WRD 108
Score = 68.9 bits (161), Expect = 1e-11
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +1
Query: 172 MLFCPTCANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLK 312
+LFCP C N L+VEEG + R+ACNTCPYV+NI +KV++R +PKLK
Sbjct: 2 LLFCPGCGNGLIVEEG-QRCHRFACNTCPYVHNITRKVTNRKYPKLK 47
>AF126531-1|AAD31424.1| 108|Homo sapiens putative DNA-directed RNA
polymerase III C11 subunit protein.
Length = 108
Score = 115 bits (276), Expect = 1e-25
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 375 LQELDYIMGGAAAWENVDSTDAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHN 554
L+E+D ++GGAAAWENVDST CPKC + RAYFMQLQTRSADEPMTTFY+CCN +C H
Sbjct: 46 LKEVDDVLGGAAAWENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHR 105
Query: 555 WRD 563
WRD
Sbjct: 106 WRD 108
Score = 68.9 bits (161), Expect = 1e-11
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +1
Query: 172 MLFCPTCANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLK 312
+LFCP C N L+VEEG + R+ACNTCPYV+NI +KV++R +PKLK
Sbjct: 2 LLFCPGCGNGLIVEEG-QRCHRFACNTCPYVHNITRKVTNRKYPKLK 47
>AF060223-1|AAG43123.1| 108|Homo sapiens My010 protein protein.
Length = 108
Score = 115 bits (276), Expect = 1e-25
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 375 LQELDYIMGGAAAWENVDSTDAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHN 554
L+E+D ++GGAAAWENVDST CPKC + RAYFMQLQTRSADEPMTTFY+CCN +C H
Sbjct: 46 LKEVDDVLGGAAAWENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHR 105
Query: 555 WRD 563
WRD
Sbjct: 106 WRD 108
Score = 68.9 bits (161), Expect = 1e-11
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +1
Query: 172 MLFCPTCANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLK 312
+LFCP C N L+VEEG + R+ACNTCPYV+NI +KV++R +PKLK
Sbjct: 2 LLFCPGCGNGLIVEEG-QRCHRFACNTCPYVHNITRKVTNRKYPKLK 47
>AF051316-1|AAF18268.1| 108|Homo sapiens RNA polymerase III subunit
protein.
Length = 108
Score = 115 bits (276), Expect = 1e-25
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 375 LQELDYIMGGAAAWENVDSTDAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHN 554
L+E+D ++GGAAAWENVDST CPKC + RAYFMQLQTRSADEPMTTFY+CCN +C H
Sbjct: 46 LKEVDDVLGGAAAWENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHR 105
Query: 555 WRD 563
WRD
Sbjct: 106 WRD 108
Score = 68.9 bits (161), Expect = 1e-11
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +1
Query: 172 MLFCPTCANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLK 312
+LFCP C N L+VEEG + R+ACNTCPYV+NI +KV++R +PKLK
Sbjct: 2 LLFCPGCGNGLIVEEG-QRCHRFACNTCPYVHNITRKVTNRKYPKLK 47
>AE006462-2|AAK61210.1| 108|Homo sapiens RNA polymerase III subunit
CII protein.
Length = 108
Score = 115 bits (276), Expect = 1e-25
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 375 LQELDYIMGGAAAWENVDSTDAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHN 554
L+E+D ++GGAAAWENVDST CPKC + RAYFMQLQTRSADEPMTTFY+CCN +C H
Sbjct: 46 LKEVDDVLGGAAAWENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHR 105
Query: 555 WRD 563
WRD
Sbjct: 106 WRD 108
Score = 67.7 bits (158), Expect = 3e-11
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +1
Query: 172 MLFCPTCANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLK 312
+LFCP C N L+VEEG + R++CNTCPYV+NI +KV++R +PKLK
Sbjct: 2 LLFCPGCGNGLIVEEG-QRCHRFSCNTCPYVHNITRKVTNRKYPKLK 47
>BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRSADEPMTTF C ++C + W+
Sbjct: 310 CSKCKKKNCTYNQVQTRSADEPMTTFVLC--NECGNRWK 346
>AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRSADEPMTTF C ++C + W+
Sbjct: 310 CSKCKKKNCTYNQVQTRSADEPMTTFVLC--NECGNRWK 346
>AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRSADEPMTTF C ++C + W+
Sbjct: 310 CSKCKKKNCTYNQVQTRSADEPMTTFVLC--NECGNRWK 346
>AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongation
factor TFIIS.h protein.
Length = 320
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRSADEPMTTF C ++C + W+
Sbjct: 282 CSKCKKKNCTYNQVQTRSADEPMTTFVLC--NECGNRWK 318
>X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 44.4 bits (100), Expect = 3e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRSADEPMTTF C ++C + W+
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPMTTFVVC--NECGNRWK 299
>X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation
factor protein.
Length = 280
Score = 44.4 bits (100), Expect = 3e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRSADEPMTTF C ++C + W+
Sbjct: 242 CGKCKKKNCTYTQVQTRSADEPMTTFVVC--NECGNRWK 278
>M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation
factor SII protein.
Length = 301
Score = 44.4 bits (100), Expect = 3e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRSADEPMTTF C ++C + W+
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPMTTFVVC--NECGNRWK 299
>CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein.
Length = 301
Score = 44.4 bits (100), Expect = 3e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRSADEPMTTF C ++C + W+
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPMTTFVVC--NECGNRWK 299
>BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 44.4 bits (100), Expect = 3e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRSADEPMTTF C ++C + W+
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPMTTFVVC--NECGNRWK 299
>BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 44.4 bits (100), Expect = 3e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRSADEPMTTF C ++C + W+
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPMTTFVVC--NECGNRWK 299
>D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation
factor S-II, hS-II-T1 protein.
Length = 299
Score = 43.2 bits (97), Expect = 7e-04
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRS+DEPMTTF C ++C + W+
Sbjct: 261 CGKCRKKNCTYTQVQTRSSDEPMTTFVVC--NECGNRWK 297
>CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein.
Length = 299
Score = 43.2 bits (97), Expect = 7e-04
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRS+DEPMTTF C ++C + W+
Sbjct: 261 CGKCRKKNCTYTQVQTRSSDEPMTTFVVC--NECGNRWK 297
>BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 43.2 bits (97), Expect = 7e-04
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRS+DEPMTTF C ++C + W+
Sbjct: 261 CGKCRKKNCTYTQVQTRSSDEPMTTFVVC--NECGNRWK 297
>AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 272
Score = 43.2 bits (97), Expect = 7e-04
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRS+DEPMTTF C ++C + W+
Sbjct: 234 CGKCRKKNCTYTQVQTRSSDEPMTTFVVC--NECGNRWK 270
>AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 270
Score = 43.2 bits (97), Expect = 7e-04
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRS+DEPMTTF C ++C + W+
Sbjct: 234 CGKCRKKNCTYTQVQTRSSDEPMTTFVVC--NECGNRWK 270
>AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 43.2 bits (97), Expect = 7e-04
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRS+DEPMTTF C ++C + W+
Sbjct: 261 CGKCRKKNCTYTQVQTRSSDEPMTTFVVC--NECGNRWK 297
>X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 444 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 560
C KC + Q+QTRSADEP+TTF C ++C + W+
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPVTTFVVC--NECGNRWK 299
>Z23102-1|CAA80649.1| 125|Homo sapiens RNA Polymerase II subunit
14.5 kD protein.
Length = 125
Score = 40.3 bits (90), Expect = 0.005
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 435 DAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWRD 563
D C KCG+ A F Q + A++ M +Y C C H W +
Sbjct: 83 DHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +1
Query: 178 FCPTCANMLMVEEGPE-AALRYACNTCPY 261
FC C NML +E E L YAC C Y
Sbjct: 16 FCQECNNMLYPKEDKENRILLYACRNCDY 44
>BC067794-1|AAH67794.1| 125|Homo sapiens polymerase (RNA) II (DNA
directed) polypeptide I, 14.5kDa protein.
Length = 125
Score = 40.3 bits (90), Expect = 0.005
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 435 DAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWRD 563
D C KCG+ A F Q + A++ M +Y C C H W +
Sbjct: 83 DHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +1
Query: 178 FCPTCANMLMVEEGPE-AALRYACNTCPY 261
FC C NML +E E L YAC C Y
Sbjct: 16 FCQECNNMLYPKEDKENRILLYACRNCDY 44
>BC017112-1|AAH17112.1| 125|Homo sapiens polymerase (RNA) II (DNA
directed) polypeptide I, 14.5kDa protein.
Length = 125
Score = 40.3 bits (90), Expect = 0.005
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 435 DAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWRD 563
D C KCG+ A F Q + A++ M +Y C C H W +
Sbjct: 83 DHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +1
Query: 178 FCPTCANMLMVEEGPE-AALRYACNTCPY 261
FC C NML +E E L YAC C Y
Sbjct: 16 FCQECNNMLYPKEDKENRILLYACRNCDY 44
>AD001527-2|AAB51181.1| 125|Homo sapiens HUMAN DNA-DIRECTED RNA
POLYMERASE II 14.5 KD SUBUNIT protein.
Length = 125
Score = 40.3 bits (90), Expect = 0.005
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 435 DAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWRD 563
D C KCG+ A F Q + A++ M +Y C C H W +
Sbjct: 83 DHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +1
Query: 178 FCPTCANMLMVEEGPE-AALRYACNTCPY 261
FC C NML +E E L YAC C Y
Sbjct: 16 FCQECNNMLYPKEDKENRILLYACRNCDY 44
>CR457109-1|CAG33390.1| 126|Homo sapiens ZNRD1 protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 DAVCPKCGY-GRAYFMQLQTRSADEPMTTFYRCCNHK 542
D CP+CG+ G AY + Q RSADE T FY C N K
Sbjct: 84 DRRCPRCGHEGMAYHTR-QMRSADEGQTVFYTCTNCK 119
>BX088647-3|CAI95579.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 DAVCPKCGY-GRAYFMQLQTRSADEPMTTFYRCCNHK 542
D CP+CG+ G AY + Q RSADE T FY C N K
Sbjct: 84 DRRCPRCGHEGMAYHTR-QMRSADEGQTVFYTCTNCK 119
>BC050608-1|AAH50608.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 DAVCPKCGY-GRAYFMQLQTRSADEPMTTFYRCCNHK 542
D CP+CG+ G AY + Q RSADE T FY C N K
Sbjct: 84 DRRCPRCGHEGMAYHTR-QMRSADEGQTVFYTCTNCK 119
>BC010898-1|AAH10898.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 DAVCPKCGY-GRAYFMQLQTRSADEPMTTFYRCCNHK 542
D CP+CG+ G AY + Q RSADE T FY C N K
Sbjct: 84 DRRCPRCGHEGMAYHTR-QMRSADEGQTVFYTCTNCK 119
>AL845439-2|CAI18538.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 DAVCPKCGY-GRAYFMQLQTRSADEPMTTFYRCCNHK 542
D CP+CG+ G AY + Q RSADE T FY C N K
Sbjct: 84 DRRCPRCGHEGMAYHTR-QMRSADEGQTVFYTCTNCK 119
>AL671859-2|CAI17577.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 DAVCPKCGY-GRAYFMQLQTRSADEPMTTFYRCCNHK 542
D CP+CG+ G AY + Q RSADE T FY C N K
Sbjct: 84 DRRCPRCGHEGMAYHTR-QMRSADEGQTVFYTCTNCK 119
>AL669914-2|CAI18176.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 DAVCPKCGY-GRAYFMQLQTRSADEPMTTFYRCCNHK 542
D CP+CG+ G AY + Q RSADE T FY C N K
Sbjct: 84 DRRCPRCGHEGMAYHTR-QMRSADEGQTVFYTCTNCK 119
>AF230338-1|AAG50160.1| 126|Homo sapiens nuclear RNA polymerase I
small specific subunit Rpa12 protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 DAVCPKCGY-GRAYFMQLQTRSADEPMTTFYRCCNHK 542
D CP+CG+ G AY + Q RSADE T FY C N K
Sbjct: 84 DRRCPRCGHEGMAYHTR-QMRSADEGQTVFYTCTNCK 119
>AF230337-1|AAG50159.1| 126|Homo sapiens nuclear RNA polymerase I
small specific subunit Rpa12 protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 DAVCPKCGY-GRAYFMQLQTRSADEPMTTFYRCCNHK 542
D CP+CG+ G AY + Q RSADE T FY C N K
Sbjct: 84 DRRCPRCGHEGMAYHTR-QMRSADEGQTVFYTCTNCK 119
>AF024617-1|AAF40469.1| 126|Homo sapiens transcription-associated
zinc ribbon protein protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 DAVCPKCGY-GRAYFMQLQTRSADEPMTTFYRCCNHK 542
D CP+CG+ G AY + Q RSADE T FY C N K
Sbjct: 84 DRRCPRCGHEGMAYHTR-QMRSADEGQTVFYTCTNCK 119
>AB202082-1|BAE78600.1| 126|Homo sapiens zinc ribbon domain
containing, 1 protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 435 DAVCPKCGY-GRAYFMQLQTRSADEPMTTFYRCCNHK 542
D CP+CG+ G AY + Q RSADE T FY C N K
Sbjct: 84 DRRCPRCGHEGMAYHTR-QMRSADEGQTVFYTCTNCK 119
>AF233442-1|AAF61308.1| 381|Homo sapiens NEDD8-specific protease
protein.
Length = 381
Score = 31.9 bits (69), Expect = 1.8
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 175 LFCPTCANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLKVGHIT-FTTSRTYL 351
+F C N+ EE E+ C+ C KK++ + FP++ V H+ F+ SR +
Sbjct: 230 VFLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSI 289
Query: 352 K 354
K
Sbjct: 290 K 290
>BC090946-1|AAH90946.1| 565|Homo sapiens ubiquitin specific
peptidase 21 protein.
Length = 565
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 190 CANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLKVGHIT-FTTSRTYLK 354
C N+ EE E+ C+ C KK++ + FP++ V H+ F+ SR +K
Sbjct: 419 CFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 474
>BC003130-1|AAH03130.2| 477|Homo sapiens USP21 protein protein.
Length = 477
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 190 CANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLKVGHIT-FTTSRTYLK 354
C N+ EE E+ C+ C KK++ + FP++ V H+ F+ SR +K
Sbjct: 331 CFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 386
>AL590714-3|CAH72142.1| 551|Homo sapiens ubiquitin specific
peptidase 21 protein.
Length = 551
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 190 CANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLKVGHIT-FTTSRTYLK 354
C N+ EE E+ C+ C KK++ + FP++ V H+ F+ SR +K
Sbjct: 419 CFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 474
>AL590714-2|CAH72143.1| 565|Homo sapiens ubiquitin specific
peptidase 21 protein.
Length = 565
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 190 CANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLKVGHIT-FTTSRTYLK 354
C N+ EE E+ C+ C KK++ + FP++ V H+ F+ SR +K
Sbjct: 419 CFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 474
>AF217979-1|AAG17222.1| 550|Homo sapiens unknown protein.
Length = 550
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 190 CANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLKVGHIT-FTTSRTYLK 354
C N+ EE E+ C+ C KK++ + FP++ V H+ F+ SR +K
Sbjct: 418 CFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 473
>AF177758-1|AAD54321.1| 565|Homo sapiens ubiquitin specific
protease 16 protein.
Length = 565
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 190 CANMLMVEEGPEAALRYACNTCPYVYNIKKKVSSRTFPKLKVGHIT-FTTSRTYLK 354
C N+ EE E+ C+ C KK++ + FP++ V H+ F+ SR +K
Sbjct: 419 CFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 474
>L13977-1|AAA99891.1| 496|Homo sapiens prolylcarboxypeptidase
protein.
Length = 496
Score = 29.9 bits (64), Expect = 7.1
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 315 WSHYLHNK*NIFKNSHMIFFLQELDYIMGGAAAWENVDSTDAVCPKCGYGRAYFMQLQTR 494
W ++ NI +++++F ELD GG + D+ AV G A+ + L+T+
Sbjct: 406 WITTMYGGKNISSHTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEG---AHHLDLRTK 462
Query: 495 SADEPMTTFY-RCCNHKCAHNW 557
+A +PM+ R + NW
Sbjct: 463 NALDPMSVLLARSLEVRHMKNW 484
>BC001500-1|AAH01500.1| 496|Homo sapiens prolylcarboxypeptidase
(angiotensinase C) protein.
Length = 496
Score = 29.9 bits (64), Expect = 7.1
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 315 WSHYLHNK*NIFKNSHMIFFLQELDYIMGGAAAWENVDSTDAVCPKCGYGRAYFMQLQTR 494
W ++ NI +++++F ELD GG + D+ AV G A+ + L+T+
Sbjct: 406 WITTMYGGKNISSHTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEG---AHHLDLRTK 462
Query: 495 SADEPMTTFY-RCCNHKCAHNW 557
+A +PM+ R + NW
Sbjct: 463 NALDPMSVLLARSLEVRHMKNW 484
>AK131215-1|BAD18404.1| 543|Homo sapiens protein ( Homo sapiens
cDNA FLJ16103 fis, clone TESTI2016663, moderately
similar to EPHRIN TYPE-A RECEPTOR 7 PRECURSOR (EC
2.7.1.112). ).
Length = 543
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 372 FLQELDYIMGGAAAWENVDSTDAVCPKCGYGR 467
+L E+ Y+ G AA + S+D VC G+GR
Sbjct: 255 YLSEMGYVHRGLAAHHVLVSSDLVCKISGFGR 286
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,329,243
Number of Sequences: 237096
Number of extensions: 1525952
Number of successful extensions: 2284
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2277
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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