Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1092
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX640815-1|CAE45893.1| 453|Homo sapiens hypothetical protein pr... 31 2.8
BC110499-1|AAI10500.1| 512|Homo sapiens USP22 protein protein. 31 2.8
AB028986-1|BAA83015.1| 593|Homo sapiens KIAA1063 protein protein. 31 2.8
AY004227-1|AAF93173.1| 2149|Homo sapiens betaIV spectrin isoform... 30 8.7
AY004226-2|AAF93172.1| 1307|Homo sapiens betaIV spectrin isoform... 30 8.7
AL133093-1|CAB61407.1| 441|Homo sapiens hypothetical protein pr... 30 8.7
AF324064-1|AAQ14859.1| 2002|Homo sapiens beta spectrin IV protein. 30 8.7
AF324063-1|AAQ14860.1| 2564|Homo sapiens non-erythrocytic beta-s... 30 8.7
AF311856-1|AAG42474.1| 678|Homo sapiens spectrin beta IV protein. 30 8.7
AF311855-1|AAG42473.1| 2564|Homo sapiens spectrin beta IV protein. 30 8.7
AF082075-1|AAG38874.1| 2559|Homo sapiens beta4sigma1 spectrin pr... 30 8.7
AB046862-1|BAB13468.1| 1997|Homo sapiens KIAA1642 protein protein. 30 8.7
>BX640815-1|CAE45893.1| 453|Homo sapiens hypothetical protein
protein.
Length = 453
Score = 31.5 bits (68), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 225 YCLFFGIFTLQTLHTHAWVRRN 160
YC+FFG FT + +H HA +R+
Sbjct: 6 YCVFFGCFTKKHIHEHAKAKRH 27
>BC110499-1|AAI10500.1| 512|Homo sapiens USP22 protein protein.
Length = 512
Score = 31.5 bits (68), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 225 YCLFFGIFTLQTLHTHAWVRRN 160
YC+FFG FT + +H HA +R+
Sbjct: 65 YCVFFGCFTKKHIHEHAKAKRH 86
>AB028986-1|BAA83015.1| 593|Homo sapiens KIAA1063 protein protein.
Length = 593
Score = 31.5 bits (68), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 225 YCLFFGIFTLQTLHTHAWVRRN 160
YC+FFG FT + +H HA +R+
Sbjct: 146 YCVFFGCFTKKHIHEHAKAKRH 167
>AY004227-1|AAF93173.1| 2149|Homo sapiens betaIV spectrin isoform
sigma4 protein.
Length = 2149
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -3
Query: 402 RQPVPSPLSPPKARPTSST--RTLICYKNDLQ*KYLQVR 292
R+ +P +PP+ RP++S+ RTL +++DLQ QVR
Sbjct: 1849 RRRLPRLTTPPEPRPSASSMQRTLRAFEHDLQLLVSQVR 1887
>AY004226-2|AAF93172.1| 1307|Homo sapiens betaIV spectrin isoform
sigma3 protein.
Length = 1307
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -3
Query: 402 RQPVPSPLSPPKARPTSST--RTLICYKNDLQ*KYLQVR 292
R+ +P +PP+ RP++S+ RTL +++DLQ QVR
Sbjct: 597 RRRLPRLTTPPEPRPSASSMQRTLRAFEHDLQLLVSQVR 635
>AL133093-1|CAB61407.1| 441|Homo sapiens hypothetical protein
protein.
Length = 441
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -3
Query: 402 RQPVPSPLSPPKARPTSST--RTLICYKNDLQ*KYLQVR 292
R+ +P +PP+ RP++S+ RTL +++DLQ QVR
Sbjct: 293 RRRLPRLTTPPEPRPSASSMQRTLRAFEHDLQLLVSQVR 331
>AF324064-1|AAQ14859.1| 2002|Homo sapiens beta spectrin IV protein.
Length = 2002
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -3
Query: 402 RQPVPSPLSPPKARPTSST--RTLICYKNDLQ*KYLQVR 292
R+ +P +PP+ RP++S+ RTL +++DLQ QVR
Sbjct: 1854 RRRLPRLTTPPEPRPSASSMQRTLRAFEHDLQLLVSQVR 1892
>AF324063-1|AAQ14860.1| 2564|Homo sapiens non-erythrocytic
beta-spectrin 4 protein.
Length = 2564
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -3
Query: 402 RQPVPSPLSPPKARPTSST--RTLICYKNDLQ*KYLQVR 292
R+ +P +PP+ RP++S+ RTL +++DLQ QVR
Sbjct: 1854 RRRLPRLTTPPEPRPSASSMQRTLRAFEHDLQLLVSQVR 1892
>AF311856-1|AAG42474.1| 678|Homo sapiens spectrin beta IV protein.
Length = 678
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -3
Query: 402 RQPVPSPLSPPKARPTSST--RTLICYKNDLQ*KYLQVR 292
R+ +P +PP+ RP++S+ RTL +++DLQ QVR
Sbjct: 530 RRRLPRLTTPPEPRPSASSMQRTLRAFEHDLQLLVSQVR 568
>AF311855-1|AAG42473.1| 2564|Homo sapiens spectrin beta IV protein.
Length = 2564
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -3
Query: 402 RQPVPSPLSPPKARPTSST--RTLICYKNDLQ*KYLQVR 292
R+ +P +PP+ RP++S+ RTL +++DLQ QVR
Sbjct: 1854 RRRLPRLTTPPEPRPSASSMQRTLRAFEHDLQLLVSQVR 1892
>AF082075-1|AAG38874.1| 2559|Homo sapiens beta4sigma1 spectrin
protein.
Length = 2559
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -3
Query: 402 RQPVPSPLSPPKARPTSST--RTLICYKNDLQ*KYLQVR 292
R+ +P +PP+ RP++S+ RTL +++DLQ QVR
Sbjct: 1849 RRRLPRLTTPPEPRPSASSMQRTLRAFEHDLQLLVSQVR 1887
>AB046862-1|BAB13468.1| 1997|Homo sapiens KIAA1642 protein protein.
Length = 1997
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -3
Query: 402 RQPVPSPLSPPKARPTSST--RTLICYKNDLQ*KYLQVR 292
R+ +P +PP+ RP++S+ RTL +++DLQ QVR
Sbjct: 1469 RRRLPRLTTPPEPRPSASSMQRTLRAFEHDLQLLVSQVR 1507
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,303,918
Number of Sequences: 237096
Number of extensions: 1569564
Number of successful extensions: 3200
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3190
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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