Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1077
(605 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 49 6e-07
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo... 47 2e-06
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 41 1e-04
SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyc... 30 0.23
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 29 0.53
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 28 0.92
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 27 2.1
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 2.8
SPAC1952.09c |||acetyl-CoA hydrolase|Schizosaccharomyces pombe|c... 27 2.8
SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 26 3.7
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 26 4.9
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 26 4.9
SPCC1840.05c |||phosphomannomutase |Schizosaccharomyces pombe|ch... 26 4.9
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 26 4.9
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 25 6.5
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 25 6.5
SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr 3|||... 25 6.5
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 25 8.6
SPAC6G10.07 |||nuclear cap-binding complex large subunit |Schizo... 25 8.6
SPBC211.06 |gfh1||gamma tubulin complex subunit Gfh1|Schizosacch... 25 8.6
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 25 8.6
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 48.8 bits (111), Expect = 6e-07
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 18/202 (8%)
Frame = +1
Query: 37 RQSPSPRXYMVIEALNIP-NVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTDDKFVIWDS 213
+ S S R ++E L +P +K D + + KL+P P++ DD +S
Sbjct: 8 KNSRSTRIVWMLEELKVPYEIKVYD---RVDGRAPPAYTKLSPLGKSPIVVDDGVTYIES 64
Query: 214 HAIATYLLNKYGKGSSYYPEDPEKRALIDMRLHFDSGILYP--------ALRENDEPIFF 369
AI +L+ KYG ED + ++ +HF L P L N PIFF
Sbjct: 65 AAILEHLVRKYGPSFKPSEEDVAELEKYELWMHFSEASLMPFIWASHVLDLSVNMTPIFF 124
Query: 370 WGETTFKPQGLAKIKSAY---------DFTEKFLSDSPWIAGDDVTVADMSCVATIGSLD 522
Q + IKS Y D+ + L+ + + AG+ T AD I +
Sbjct: 125 ---RYIVRQFVNGIKSKYLSKETFLNLDYIDNHLASNEYFAGEQFTAADPQMCFPIFAAQ 181
Query: 523 ALLPINEKEYPKITSWLKRSSE 588
+++K Y I W++ S+
Sbjct: 182 RDY-LSQKPYKNIKRWMRVVSD 202
>SPCC965.07c |gst2||glutathione S-transferase
Gst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 47.2 bits (107), Expect = 2e-06
Identities = 54/198 (27%), Positives = 80/198 (40%), Gaps = 22/198 (11%)
Frame = +1
Query: 52 PRXYMVIEALNIPNVKYVDV--DLLAEDHLKEEFLKLNPQHTIPMLTDDK---FVIWDSH 216
P + V+ AL N+ Y + D + +E L LNP +P L D K + IW+S
Sbjct: 13 PNPWKVVLALKELNLSYEQIFYDFQKGEQKCKEHLALNPNGRVPTLVDHKNNDYTIWESD 72
Query: 217 AIATYLLNKY--GKGSSYYPEDPEKRALIDMRLHFDSGILYPALRENDEPIFFWGETTFK 390
AI YL +KY + S +DPE LI L F + + FF E
Sbjct: 73 AILIYLADKYDTDRKISLSFDDPEYYKLIQY-LFFQASGQGVIWGQAGWFNFFHHEPVVS 131
Query: 391 --PQGLAKIKSAYDFTEKFLSDSPWIAGDDVTVADMSCVATIGSLDALLPIN-------- 540
+ +IK E L D ++ + T+AD+S + +L L
Sbjct: 132 AVTRYRNEIKRVLGVLEDILKDRDYLVANKYTIADLSFIPWNYNLGGLFGEGKFSFKEEV 191
Query: 541 -----EKEYPKITSWLKR 579
EKE+PK +W +R
Sbjct: 192 PQLDFEKEFPKAYAWNQR 209
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 41.1 bits (92), Expect = 1e-04
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Frame = +1
Query: 52 PRXYMVIEALNIPNVKYVD--VDLLAEDHLKEEFLKLNPQHTIPMLTD---DKFVIWDSH 216
P + V++AL ++ Y V+ + E L LNP +P L D + + IW+S
Sbjct: 13 PNPWKVVQALKELDLTYETRYVNFSKNEQKSPEHLALNPNGRVPTLIDHHNNDYTIWESD 72
Query: 217 AIATYLLNKYG-KGSSYYPEDPEKRALIDMRLHFDS---GILYPA---LRENDEPIFFWG 375
AI YL +KY + P D + + L F + GI++ + +
Sbjct: 73 AILIYLADKYDTERKISLPRDHPEYYKVIQYLFFQASGQGIIWGQAGWFSVYHQELVISA 132
Query: 376 ETTFKPQGLAKIKSAYDFTEKFLSDSPWIAGDDVTVADMSCVATIGSLDALLPIN----- 540
T ++ + IK E L D ++ + T+AD+S ++ L+ +
Sbjct: 133 ITRYRNE----IKRVLGVLEDILKDRDYLVANRFTIADLSFISWNNFLEIIFAEGKFSIE 188
Query: 541 --------EKEYPKITSWLKR 579
EKE+P+ SW +R
Sbjct: 189 EEVPQLDFEKEFPRTYSWHQR 209
>SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 313
Score = 30.3 bits (65), Expect = 0.23
Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 16/157 (10%)
Frame = +1
Query: 157 NPQHTIPMLTDDKFVIWDSHAIATYLLNKYGKGSSYYPEDPEKRAL----IDMRLHFD-- 318
N + T+P+L D K+ ++ A ++ + + ED EKR + +R D
Sbjct: 113 NMRFTVPVLWDSKYNTIVNNESAE-IIRMFNDAFNEVIEDEEKRVVDLYPSSLRTKIDEL 171
Query: 319 SGILYPALRENDEPIFFWGETTFKPQGLAKIKSAYDFTEKFLSDS--PWIAGDDVTVADM 492
+ Y + F + + + D E+ L +S P++ GD +T D+
Sbjct: 172 NDYFYDTVNNGVYKTGFATTAEAYEKNVRVVFQGLDRLEQVLKESKGPFLLGDHLTETDV 231
Query: 493 SCVATIGSLDALLPINEK--------EYPKITSWLKR 579
TI D + + K YP I WLKR
Sbjct: 232 RLYTTIVRFDPVYVQHFKCNIGTIRHNYPHINQWLKR 268
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 29.1 bits (62), Expect = 0.53
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 466 GDDVTVADMSCVATIGSLDALLPINEKEYP 555
G D+ VAD S T S DA++ + +K YP
Sbjct: 655 GSDILVADPSTTVTPKSRDAVMDVVQKYYP 684
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 28.3 bits (60), Expect = 0.92
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 256 SSYYPEDPEKRALIDMRLHFDSGILYPALRENDEPIFFWGE 378
++YY E EK + +++ ++ + LR EPI ++GE
Sbjct: 29 AAYYAEQKEKDRIKALKIPYEDSKVREYLRRYGEPITYFGE 69
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 388 KPQGLAKIKSAYDFTEKFLSDSPWIAGDDVTVADM 492
K A IKS D +E F + S WI G D D+
Sbjct: 501 KKDSSAPIKSLLDRSEFFTNVSHWIIGSDAWAYDL 535
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1334
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 37 RQSPSPRXYMVIEALNIPNVKYVDV 111
R++ SP + + ALNIPN+ ++V
Sbjct: 1023 RKANSPLQFKPVRALNIPNISQLEV 1047
>SPAC1952.09c |||acetyl-CoA hydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 379 TTFKPQGLAKIKSAYD-FTEKFLSDSPWIAGDDVTVADMSCVA 504
T F PQG K S YD + E+ L I+ + + C+A
Sbjct: 324 TRFSPQGFEKFYSNYDYYKERILLRPQVISNHPEIIRRLGCIA 366
>SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate
transaminase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 696
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +3
Query: 27 TRWTP--VPQSARLHGHRSTKHSQRKICRRGPLS*RSFERGVLEAKPSTHHSYAD 185
TRW +P H RS HS+ + G L+ R VLE++ S D
Sbjct: 86 TRWATHGIPSPINCHPQRSDPHSEFIVVHNGILTNYRELRTVLESRGMVFESETD 140
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +1
Query: 82 NIPNVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTD 189
++PNV + + D L++ +K+N +H P+ D
Sbjct: 413 SLPNVLQLQLKRFDYDMLRDMMVKINDRHEFPLEID 448
>SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1309
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 346 ENDEPIFFWGETTFKPQGLAKIKSAYDFTEKFL 444
EN P+ F+GE PQG ++S+ F E F+
Sbjct: 1047 ENILPLHFYGELVKSPQGCEVLESSGHF-ESFM 1078
>SPCC1840.05c |||phosphomannomutase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 244 YGKGSSYY--PEDPEKRALIDMRLHFDSGILYPA 339
Y +SY+ + P+ RAL+D H+D+ YPA
Sbjct: 455 YTTQNSYFLSRDTPKLRALVDALRHYDTKSGYPA 488
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 25.8 bits (54), Expect = 4.9
Identities = 16/79 (20%), Positives = 33/79 (41%)
Frame = +1
Query: 109 VDLLAEDHLKEEFLKLNPQHTIPMLTDDKFVIWDSHAIATYLLNKYGKGSSYYPEDPEKR 288
+D L + +FL L H +P+ + ++ +HA+ L K S+ +P
Sbjct: 351 LDRLNSLYCNTQFLNLEDIH-VPLPMRETLFMYKAHAVTETLTGKPSSPDSFTNANPTTA 409
Query: 289 ALIDMRLHFDSGILYPALR 345
++ + G+L +R
Sbjct: 410 PIVSRNAQDNMGMLAYMIR 428
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 25.4 bits (53), Expect = 6.5
Identities = 20/83 (24%), Positives = 35/83 (42%)
Frame = +3
Query: 192 QIRHLGQSCNSYIFAKQIRQRQFILSRGPREESPDRYEITFRQWNIVSCFARKRRAHFLL 371
++ + G SY+F I R S GP S Y + ++ S A + F +
Sbjct: 18 KLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATE-DLDFFI 76
Query: 372 GRDHLQASRSGQNKVSL*FHGEV 440
G D L+ + +G + HG++
Sbjct: 77 GNDALKKASAGYSLDYPIRHGQI 99
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 25.4 bits (53), Expect = 6.5
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 4 NKNGANTLQDGRQSPSPRXYMVIEALNI--PNVKYVDVDLLAEDHLKEEFLKLNPQHTIP 177
+KNG +T+ + + SPSP ++ I NVK + L + E+ LK +H I
Sbjct: 210 SKNGVHTINNMQSSPSPSSSFLLPLTQIDSQNVKRSNNYLSTSPPILEQRLK---RHRID 266
Query: 178 MLTDD 192
+ +D
Sbjct: 267 VSDED 271
>SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 319
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 472 DVTVADMSCVATIGSLDALLPINEKEYPKITSWLK 576
+V+ A SC+ I L ++ + + PK + WL+
Sbjct: 98 EVSSAISSCIHQIAKLQEIVKEQQSQIPKKSGWLQ 132
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 505 TIGSLDALLPINEKEYPKITSWLK 576
T SL L P+NE+ + +SW K
Sbjct: 3 TASSLSVLTPLNEENVDRKSSWSK 26
>SPAC6G10.07 |||nuclear cap-binding complex large subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 780
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 172 IPMLTDDKFVIWDSHAIATYLLNKYGKGSSYYPE 273
+P+ T D+F+ W SH ++ + N + K + + P+
Sbjct: 433 LPLQTLDRFIDWFSHHLSNF--NFHWKWNEWIPD 464
>SPBC211.06 |gfh1||gamma tubulin complex subunit
Gfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 577
Score = 25.0 bits (52), Expect = 8.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 534 RQERIQTADCSNTAHISHS 478
R + + DC AH+SHS
Sbjct: 532 RSQEVSKVDCQLAAHVSHS 550
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 405 GQTLRLEGGLAPKENGLVVFSQSR 334
G TL GG+ K +G+VVF +R
Sbjct: 401 GATLACGGGVQDKTSGVVVFDTTR 424
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.136 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,607,929
Number of Sequences: 5004
Number of extensions: 56547
Number of successful extensions: 167
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 266270664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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