Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1076
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0807 + 32125987-32126029,32126030-32126208,32126760-321269... 123 1e-28
07_03_1177 - 24574682-24574852,24575047-24575618,24575711-245760... 114 7e-26
03_05_0253 + 22416981-22416993,22417458-22417639,22417965-224181... 113 2e-25
02_01_0652 - 4848174-4848194,4849121-4849693,4849816-4849955,485... 48 7e-06
04_04_0204 + 23582239-23582338,23582866-23583213,23583357-235834... 40 0.001
02_04_0415 + 22706964-22707072,22707784-22708077,22708304-227084... 40 0.002
08_02_1169 + 24858843-24858993,24859495-24859788,24860303-248603... 36 0.023
03_05_0730 + 27208293-27208813,27209052-27209173,27210429-272104... 34 0.091
12_02_0229 - 15940144-15940451,15940879-15941380,15941594-159417... 33 0.21
09_02_0535 - 10346395-10346705,10347100-10347175,10348931-103490... 32 0.37
01_06_0195 + 27379266-27379300,27379870-27382174 29 2.6
01_06_0203 - 27487469-27489787 29 3.4
07_01_1213 + 11562671-11562729,11563814-11563907,11564465-115645... 29 4.5
02_03_0403 + 18636953-18637004,18637088-18637299,18638852-186389... 29 4.5
03_02_0569 - 9528027-9529256,9530019-9530260,9530374-9531161,953... 28 6.0
11_03_0128 - 10437407-10438049,10438097-10438272 28 7.9
>01_06_0807 +
32125987-32126029,32126030-32126208,32126760-32126943,
32127714-32127788,32128079-32128188,32128747-32128965,
32129124-32129279,32129759-32129911,32130223-32130349,
32131598-32131728,32131858-32132139
Length = 552
Score = 123 bits (297), Expect = 1e-28
Identities = 87/236 (36%), Positives = 121/236 (51%), Gaps = 12/236 (5%)
Frame = +1
Query: 1 YALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 180
Y +I GAD+IE D++ +KDG L+ HD L TTDVASR EF+ R RT V+ TG
Sbjct: 73 YLRAIEEGADFIETDILASKDGALICFHDVTLDATTDVASRKEFSNRRRTYEVEWFNATG 132
Query: 181 WFTEDFTLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQEIISLAKGLQKSQKRTIGIY 360
WF DFTL E+KTL+ +R P + + +G F+I TF+E IS+A L S RT+GIY
Sbjct: 133 WFVVDFTLEELKTLKVNQRYP---FRDQQYNGKFSIITFEEFISIA--LDAS--RTVGIY 185
Query: 361 PEIKHSTHFKKL-----GLAMEEPVVNILHKNGYRDP-------SAPVYIQSFEVTNXXX 504
PE+K K G E+ V+ L K GY+ P++IQSF T+
Sbjct: 186 PEMKDPVFINKHVKWDGGKKFEDKFVDTLLKYGYKGQYMSENWLKQPLFIQSFAPTSLVH 245
Query: 505 XXXXXXXXXXXXFESDKSLQPFDQLELGTNLTYGEMASQEGLKEVAKYAHAAGPDK 672
+ D S++ D TN +Y ++ S + L ++ Y GP K
Sbjct: 246 ASKLTDSPKIFLID-DFSVRTQD-----TNQSYWDITSDDYLAYISNYVVGLGPWK 295
>07_03_1177 -
24574682-24574852,24575047-24575618,24575711-24576068,
24576108-24576152
Length = 381
Score = 114 bits (274), Expect = 7e-26
Identities = 85/236 (36%), Positives = 116/236 (49%), Gaps = 12/236 (5%)
Frame = +1
Query: 1 YALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 180
Y +I GAD+IE D+ TKDG LV HD L TTDVA EFA+R RT V + +TG
Sbjct: 72 YMRAIDEGADFIEADVTATKDGHLVCFHDTTLDATTDVADHPEFASRRRTLEVQWTNVTG 131
Query: 181 WFTEDFTLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQEIISLAKGLQKSQKRTIGIY 360
+F DFTLAE+KTLR+++R R + + I TF E I A G + R +GIY
Sbjct: 132 FFITDFTLAELKTLRSKQRYA-FRDRSYNGGESSRIITFDEFIDTAAG---AASRVVGIY 187
Query: 361 PEIKHSTHFKKL-----GLAMEEPVVNILHKNG----YRDP---SAPVYIQSFEVTNXXX 504
PEIK+ + G E+ V L + G Y P + PV+IQSF T+
Sbjct: 188 PEIKNPVFVNRQVRWRDGKKFEDKFVAALKRRGYGGRYMSPAWAARPVFIQSFAPTSLVY 247
Query: 505 XXXXXXXXXXXXFESDKSLQPFDQLELGTNLTYGEMASQEGLKEVAKYAHAAGPDK 672
+ D +++ D T+ +Y E+ S E L + +Y GP K
Sbjct: 248 AAGLTDSPMVLLVD-DTTVRTED-----TSQSYDEVTSDEHLDYMREYVVGVGPWK 297
>03_05_0253 +
22416981-22416993,22417458-22417639,22417965-22418148,
22418241-22418315,22418481-22418590,22419411-22419629,
22419713-22419868,22419996-22420232
Length = 391
Score = 113 bits (271), Expect = 2e-25
Identities = 83/236 (35%), Positives = 119/236 (50%), Gaps = 12/236 (5%)
Frame = +1
Query: 1 YALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 180
Y +I GAD+IE D++ TKDG L+ HD L TTD+A+R EFA R RT V+ +TG
Sbjct: 64 YLRAIEEGADFIESDILATKDGHLICFHDVILDATTDIANRTEFANRKRTYEVERQNVTG 123
Query: 181 WFTEDFTLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQEIISLAKGLQKSQKRTIGIY 360
WF DFTL E+K+LR ++R + R + + +G + I TF E I +A R +GIY
Sbjct: 124 WFVVDFTLEELKSLRVKQRY-NFR--DQQYNGKYQIITFDEYILIA----LYADRVVGIY 176
Query: 361 PEIKH----STHFK-KLGLAMEEPVVNILHKNGYRDP-------SAPVYIQSFEVTNXXX 504
PE+K+ + H K G E+ V L K GY+ P++IQSF ++
Sbjct: 177 PELKNPIFINEHVKWSDGKKFEDKFVQTLLKYGYKGEYMSEDWLKQPLFIQSFAPSSLIY 236
Query: 505 XXXXXXXXXXXXFESDKSLQPFDQLELGTNLTYGEMASQEGLKEVAKYAHAAGPDK 672
+ D +++ D TN +Y E+ S L + KY GP K
Sbjct: 237 MSNMTNSPKIFLID-DTTVRTQD-----TNQSYYEITSDAYLAFIRKYIVGIGPWK 286
>02_01_0652 -
4848174-4848194,4849121-4849693,4849816-4849955,
4850072-4850359,4850458-4850505,4850605-4851106,
4851217-4851326,4851620-4851916,4852025-4852124
Length = 692
Score = 48.0 bits (109), Expect = 7e-06
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +1
Query: 1 YALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 180
Y ++ GAD I+ + M+KDGV + +LS +T ++ F T+ T + + +G
Sbjct: 377 YQQAVKDGADIIDCAVRMSKDGVAFCQPSADLSTSTTAST--SFMTKISTVS-EIQNKSG 433
Query: 181 WFTEDFTLAEIKTLRARERIPDIRAG---NARMDGTFTIPTFQEIISLAKGLQKSQKRTI 351
F+ D T +EI+TL+ P +AG N T E + LAK S
Sbjct: 434 IFSFDLTWSEIQTLKPDLLGPYTQAGLKRNPAAKNAGKFVTLPEFLDLAKATNVS----- 488
Query: 352 GIYPEIKHSTHFKKLGLAMEEPVVNILHKNGY 447
GI E++H++ K GL + + V L Y
Sbjct: 489 GIMVEMEHASFLAKRGLGLVDAVSGALANASY 520
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +1
Query: 1 YALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 180
+A+S ++ + DL ++ DG+ + L +T +A F R +T V+G I G
Sbjct: 59 FAMSSSLHDVVLYCDLQLSSDGLGFCKTGLTLENSTLIAEA--FPKRAKTYKVNGEEIHG 116
Query: 181 WFTEDFTLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQEIISL 315
WF DFT E+ + I DI + + DG + T ++++ L
Sbjct: 117 WFALDFTADEL--YQNVTLIQDIFSRPSTFDGAMGMFTLEDLVGL 159
>04_04_0204 +
23582239-23582338,23582866-23583213,23583357-23583472,
23583565-23584003,23584165-23584203,23584282-23584569,
23584667-23584806,23585080-23585563,23585828-23586090
Length = 738
Score = 40.3 bits (90), Expect = 0.001
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Frame = +1
Query: 1 YALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 180
Y ++ GAD I+ + +TKDG+ + L T VA + +FA++ D ++ G
Sbjct: 370 YQKAVDDGADVIDCPVQLTKDGIPICMSSINLMDDTTVA-KSQFASQTAV-IKDIESVLG 427
Query: 181 WFTEDFTLAEI-KTLRARERIPDIRAGNARMDGTFTIPTFQEIISLAKGLQKSQKRTI-G 354
FT + T +I K LR + P + ++D + L+ L ++ + + G
Sbjct: 428 VFTFNLTWDDIVKNLRPKISTP---FSSFKLDRNPRYRNAGNFMRLSDFLDFTKDKDLSG 484
Query: 355 IYPEIKHSTHF-KKLGLAMEEPVVNILHKNGYRDPSA-PVYIQS 480
I ++H+ ++LG M + V+ L GY + +A V IQS
Sbjct: 485 IMISVEHAAFVAEELGFDMVDSVIKTLDAAGYSNQTAQKVMIQS 528
>02_04_0415 +
22706964-22707072,22707784-22708077,22708304-22708416,
22708504-22709002,22709106-22709144,22709228-22709515,
22709766-22709905,22710468-22710960,22711082-22711356
Length = 749
Score = 39.9 bits (89), Expect = 0.002
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Frame = +1
Query: 1 YALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 180
Y ++T GAD I+ + +TKDG+ + +L T V S +F+++ T D G
Sbjct: 374 YQKAVTDGADVIDCPVQVTKDGIPICMSSIDLMDVTTV-STSQFSSQT-TVIKDIKNGAG 431
Query: 181 WFTEDFTLAEI-KTLRARERIP----DIRAGNARMDGTFTIPTFQEIISLAKGLQKSQKR 345
++ + T +I K L+ + P D+ N R + + ++ AKG K
Sbjct: 432 VYSFNLTWDDIAKNLKPKISNPMTTFDVYR-NPRNKNAGSFMRLSDFLAFAKG-----KE 485
Query: 346 TIGIYPEIKHSTHF-KKLGLAMEEPVVNILHKNGYRDPSA-PVYIQS 480
G+ I+H+ +KLG + + V+ L +GY +A V IQS
Sbjct: 486 LSGVMISIEHAAFMAEKLGFGVVDAVIKALDDSGYSKQTAQKVMIQS 532
>08_02_1169 +
24858843-24858993,24859495-24859788,24860303-24860349,
24860779-24861277,24862233-24862274,24862376-24862666,
24862793-24862932,24863278-24863770,24864105-24864484
Length = 778
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +1
Query: 1 YALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 180
+ALS T G + ++ +TKDGV + D + T ++ + + V+G G
Sbjct: 76 FALSSTSGDTVLWCNVQLTKDGVGICLRDLLMDNCTSISQ--AYRAGKKAYLVNGEEKKG 133
Query: 181 WFTEDFTLAEIKTL 222
WF D+T++ ++++
Sbjct: 134 WFPIDYTMSSLQSV 147
Score = 33.9 bits (74), Expect = 0.12
Identities = 27/80 (33%), Positives = 38/80 (47%)
Frame = +1
Query: 1 YALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 180
Y ++ GAD I+ + MT DGV V L TT+V R F+ R + D G
Sbjct: 367 YQKAVDDGADVIDCSIQMTSDGVPVCMSSINLFETTNV-QRTPFSNR-ASIFKDIQPTPG 424
Query: 181 WFTEDFTLAEIKTLRARERI 240
FT + T A+I + R +I
Sbjct: 425 IFTFNLTWADISSSDLRPKI 444
>03_05_0730 +
27208293-27208813,27209052-27209173,27210429-27210477,
27210689-27210938,27211474-27211619,27211699-27211846,
27212544-27212612,27212641-27212784
Length = 482
Score = 34.3 bits (75), Expect = 0.091
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = +1
Query: 28 DYIEPDLVMTKDGVLVARHDNELSLTT---DVASRIEFATRNRTQTVDGSAITGWFTEDF 198
DY D+ +D + + EL LT + SR + + ++ DG+ ++D+
Sbjct: 272 DYDINDVDSERDDIHARLQNLELDLTAALHTLRSRFDKVISDMSEG-DGAKAPNGLSDDW 330
Query: 199 TLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQEIISLAKGLQKSQKR 345
E K ++A+E + IRA A ++G + EII K +++ Q+R
Sbjct: 331 EFEETKVMQAQEELRSIRAKIAVLEGKMAL----EIIEKNKIIEEKQRR 375
>12_02_0229 -
15940144-15940451,15940879-15941380,15941594-15941727,
15941954-15942238,15942965-15943463,15944064-15944350,
15944702-15944801
Length = 704
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +1
Query: 1 YALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 180
Y ++ GAD I+ + MTKDG+ + L +TDV + +F++ + + G
Sbjct: 318 YEKAVGDGADVIDCSIEMTKDGIPICMSSINLYDSTDVQNS-KFSSL-ASVVPEIQTKPG 375
Query: 181 WFTEDFTLAEIKTLRAR 231
FT + T EI TLR +
Sbjct: 376 IFTFNLTWEEISTLRPK 392
>09_02_0535 -
10346395-10346705,10347100-10347175,10348931-10349070,
10349294-10349578,10349677-10349718,10350963-10351461,
10351557-10351723,10352128-10352412,10352695-10352836
Length = 648
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +1
Query: 1 YALSITMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 180
Y ++ GAD I+ + MTKDG+ + +L TTDV + +F + + + + G
Sbjct: 401 YENAVRDGADVIDCSIQMTKDGIPICMSSIDLLATTDV-QQSKFCSL-LSVIPEIQSKKG 458
Query: 181 WFTEDFTLAEIKTLRARERIP 243
FT + T +I LR + P
Sbjct: 459 IFTFNLTWDDINILRPKISSP 479
Score = 31.9 bits (69), Expect = 0.49
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 43 DLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFTLAEIKTL 222
D+ +TKDGV + D + TD+ + + ++G+ TGW D+ +A ++ +
Sbjct: 84 DVQLTKDGVGICLRDLLMQNCTDITE--IYPEGMKAYLINGAQKTGWLPVDYNMASLRNV 141
>01_06_0195 + 27379266-27379300,27379870-27382174
Length = 779
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -1
Query: 653 CAYLATSFKPSCEAISPYVRLVPSSSWSKGCRDLSLSNSCNK 528
C +L SFK SC P + ++WS+GCR L S +C+K
Sbjct: 285 CEFLP-SFKCSCP---PGYEMRDPTNWSRGCRPL-FSKNCSK 321
>01_06_0203 - 27487469-27489787
Length = 772
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 653 CAYLATSFKPSCEAISPYVRLVPSSSWSKGCRDLSLSNSCNKRSLVFV 510
C YL + SC P +V +WSKGCR + S +C K F+
Sbjct: 289 CEYLP-ELRCSCP---PGFEMVDPQNWSKGCRP-TFSYNCGKERYKFI 331
>07_01_1213 +
11562671-11562729,11563814-11563907,11564465-11564530,
11564793-11564894,11564992-11565141,11565241-11565384
Length = 204
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 31 YIEPDLVMTKDGVLVARHDNELSLTTDVASRI 126
YIE L M +DGVLV+ D LS+T D +I
Sbjct: 44 YIEVGLCMLQDGVLVSDSD-RLSMTRDNVKKI 74
>02_03_0403 +
18636953-18637004,18637088-18637299,18638852-18638911,
18639078-18639158,18639273-18639473,18639575-18639670,
18639780-18639976,18640067-18640295
Length = 375
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 28 DYIEPDLVMTKDGVLVARHDN 90
DY+E D+ +TKDG V HDN
Sbjct: 81 DYVEFDVQVTKDGCPVIFHDN 101
>03_02_0569 -
9528027-9529256,9530019-9530260,9530374-9531161,
9531613-9531953,9532090-9532310,9532392-9532702,
9532779-9533038,9533691-9533891,9533992-9534167,
9534242-9534296,9535739-9536146
Length = 1410
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 577 LELGTNLTYGEMASQEGLKEVAKYAHAAG 663
L + N+ YG A+ + ++E AK AHA G
Sbjct: 504 LSIRENIAYGRSATFDQIEEAAKTAHAHG 532
>11_03_0128 - 10437407-10438049,10438097-10438272
Length = 272
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -1
Query: 674 LLSGPAACAYLATSFKPSCEAISPYVRLVPSSSWSKGCRDLSLSNSCN 531
+ S P C A+S+ PS SP SW GCR S +C+
Sbjct: 213 MASRPNRCGS-ASSWCPSSRCPSPTASSESLGSWGSGCRSHLSSPTCS 259
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.132 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,606,317
Number of Sequences: 37544
Number of extensions: 376990
Number of successful extensions: 940
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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