Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1073
         (416 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012496-1|AAS93767.1|  421|Drosophila melanogaster HL01444p pro...    29   3.3  
AE014134-2438|AAN10861.1|  421|Drosophila melanogaster CG31839-P...    29   3.3  
AY051883-1|AAK93307.1|  308|Drosophila melanogaster LD37276p pro...    27   10.0 
AE014297-4096|AAF56683.1|  308|Drosophila melanogaster CG18766-P...    27   10.0 
AE014297-4095|AAG22171.2|  308|Drosophila melanogaster CG18766-P...    27   10.0 
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    27   10.0 

>BT012496-1|AAS93767.1|  421|Drosophila melanogaster HL01444p
           protein.
          Length = 421

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 61  VRTAAGCIIMTITFGTGSGTHARFHPCNGTETIAL*AVIRLSCQP 195
           VRTA G  I T   G G+G     + C   E  +L    R  CQP
Sbjct: 207 VRTAEGKCISTCPLGCGNGVCDERNECKCREGYSLEPETRKYCQP 251


>AE014134-2438|AAN10861.1|  421|Drosophila melanogaster CG31839-PA
           protein.
          Length = 421

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 61  VRTAAGCIIMTITFGTGSGTHARFHPCNGTETIAL*AVIRLSCQP 195
           VRTA G  I T   G G+G     + C   E  +L    R  CQP
Sbjct: 207 VRTAEGKCISTCPLGCGNGVCDERNECKCREGYSLEPETRKYCQP 251


>AY051883-1|AAK93307.1|  308|Drosophila melanogaster LD37276p
           protein.
          Length = 308

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 144 VAGMKASVSPR-ASTESDRHYNTAGGGSYSSG 52
           VA + A+ S R A    D+  NTA GGS  SG
Sbjct: 181 VAAVAAAASARLADNNMDQQMNTAAGGSGGSG 212


>AE014297-4096|AAF56683.1|  308|Drosophila melanogaster CG18766-PB,
           isoform B protein.
          Length = 308

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 144 VAGMKASVSPR-ASTESDRHYNTAGGGSYSSG 52
           VA + A+ S R A    D+  NTA GGS  SG
Sbjct: 181 VAAVAAAASARLADNNMDQQMNTAAGGSGGSG 212


>AE014297-4095|AAG22171.2|  308|Drosophila melanogaster CG18766-PA,
           isoform A protein.
          Length = 308

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 144 VAGMKASVSPR-ASTESDRHYNTAGGGSYSSG 52
           VA + A+ S R A    D+  NTA GGS  SG
Sbjct: 181 VAAVAAAASARLADNNMDQQMNTAAGGSGGSG 212


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
           protein.
          Length = 23015

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -1

Query: 347 DVTPHCANVFLNFTCRVSQCYTGRAF 270
           DV  HC N   +FTC     Y G  F
Sbjct: 139 DVFAHCTNTLGSFTCTCFPGYRGNGF 164


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,792,107
Number of Sequences: 53049
Number of extensions: 357139
Number of successful extensions: 1156
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)