Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1071
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065028-1|AAH65028.1| 380|Homo sapiens nucleoporin 43kDa protein. 98 3e-20
AF514997-1|AAM76708.1| 380|Homo sapiens nucleoporin Nup43 protein. 98 3e-20
BC040121-1|AAH40121.1| 287|Homo sapiens NUP43 protein protein. 93 7e-19
BC068485-1|AAH68485.1| 383|Homo sapiens WD repeat domain 55 pro... 46 1e-04
AK025355-1|BAB15118.1| 383|Homo sapiens protein ( Homo sapiens ... 46 1e-04
EF011620-1|ABK41110.1| 358|Homo sapiens CDW10/WDR53 protein. 38 0.047
BC054030-1|AAH54030.1| 358|Homo sapiens WD repeat domain 53 pro... 38 0.047
BC101616-1|AAI01617.1| 1102|Homo sapiens WD repeat domain 72 pro... 34 0.44
BC101614-1|AAI01615.1| 1102|Homo sapiens WD repeat domain 72 pro... 34 0.44
AK096055-1|BAC04689.1| 775|Homo sapiens protein ( Homo sapiens ... 34 0.44
AK074311-1|BAB85046.1| 176|Homo sapiens protein ( Homo sapiens ... 34 0.58
AY358182-1|AAQ88549.1| 470|Homo sapiens SSGL9393 protein. 33 1.3
AL355312-1|CAH72860.1| 248|Homo sapiens nucleoporin 43kDa protein. 33 1.3
EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related... 32 2.3
EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related... 32 2.3
BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein. 32 2.3
BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein. 32 2.3
BC026213-1|AAH26213.1| 529|Homo sapiens F-box and WD repeat dom... 32 2.3
AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein. 32 2.3
AF176022-1|AAF04528.1| 542|Homo sapiens F-box protein Fbw1b pro... 32 2.3
AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein. 32 2.3
AB033281-1|BAA92331.1| 542|Homo sapiens F-box and WD-repeats pr... 32 2.3
AB033280-1|BAA92330.1| 529|Homo sapiens F-box and WD-repeats pr... 32 2.3
AB033279-1|BAA92329.1| 508|Homo sapiens F-box and WD-repeats pr... 32 2.3
AB014596-1|BAA31671.1| 550|Homo sapiens KIAA0696 protein protein. 32 2.3
AK222488-1|BAD96208.1| 317|Homo sapiens guanine nucleotide bind... 31 4.1
M24194-1|AAA59626.1| 317|Homo sapiens MHC B complex protein 12.... 31 5.4
EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein. 31 5.4
CR541909-1|CAG46707.1| 317|Homo sapiens GNB2L1 protein. 31 5.4
CR456978-1|CAG33259.1| 317|Homo sapiens GNB2L1 protein. 31 5.4
BC032006-1|AAH32006.1| 317|Homo sapiens guanine nucleotide bind... 31 5.4
BC021993-1|AAH21993.1| 317|Homo sapiens guanine nucleotide bind... 31 5.4
BC019362-1|AAH19362.1| 317|Homo sapiens guanine nucleotide bind... 31 5.4
BC019093-1|AAH19093.1| 317|Homo sapiens guanine nucleotide bind... 31 5.4
BC017287-1|AAH17287.1| 317|Homo sapiens guanine nucleotide bind... 31 5.4
BC014788-1|AAH14788.1| 317|Homo sapiens guanine nucleotide bind... 31 5.4
BC014256-1|AAH14256.1| 317|Homo sapiens guanine nucleotide bind... 31 5.4
BC010119-1|AAH10119.1| 317|Homo sapiens guanine nucleotide bind... 31 5.4
BC000366-1|AAH00366.1| 317|Homo sapiens guanine nucleotide bind... 31 5.4
BC000214-1|AAH00214.1| 317|Homo sapiens guanine nucleotide bind... 31 5.4
AY336089-1|AAR24619.1| 271|Homo sapiens proliferation-inducing ... 31 5.4
AY159316-1|AAO21313.1| 347|Homo sapiens lung cancer oncogene 7 ... 31 5.4
AK027854-1|BAB55412.1| 504|Homo sapiens protein ( Homo sapiens ... 30 7.1
AB067039-1|BAC02077.1| 122|Homo sapiens immunoglobulin heavy ch... 30 7.1
Y14153-1|CAA74572.1| 569|Homo sapiens beta-transducin repeats c... 30 9.4
BC050674-1|AAH50674.1| 341|Homo sapiens THO complex 6 homolog (... 30 9.4
BC027994-1|AAH27994.1| 605|Homo sapiens beta-transducin repeat ... 30 9.4
BC003118-1|AAH03118.1| 317|Homo sapiens THOC6 protein protein. 30 9.4
AL627424-18|CAI41043.1| 569|Homo sapiens beta-transducin repeat... 30 9.4
AL627424-17|CAI41042.1| 605|Homo sapiens beta-transducin repeat... 30 9.4
AL445463-3|CAI12964.1| 569|Homo sapiens beta-transducin repeat ... 30 9.4
AL445463-2|CAI12963.1| 605|Homo sapiens beta-transducin repeat ... 30 9.4
AL133387-2|CAH70019.1| 569|Homo sapiens beta-transducin repeat ... 30 9.4
AL133387-1|CAH70020.1| 605|Homo sapiens beta-transducin repeat ... 30 9.4
AF129530-1|AAF04464.1| 569|Homo sapiens F-box protein Fbw1A pro... 30 9.4
AF101784-1|AAD08702.1| 605|Homo sapiens b-TRCP variant E3RS-Ika... 30 9.4
>BC065028-1|AAH65028.1| 380|Homo sapiens nucleoporin 43kDa protein.
Length = 380
Score = 97.9 bits (233), Expect = 3e-20
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLH--------NYGNTK 370
DV ++F ++ +I + S G V + + + QT L W + H +Y +
Sbjct: 76 DVMDLQFFDQERIVAASSTGCVTVF-LHHPNNQT-LSVNQQWTTAHYHTGPGSPSYSSAP 133
Query: 371 CSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNI 550
C+ + E I ++GEDG +N+ E RTI ADS +LH++ +L+ E++T N
Sbjct: 134 CTGVVCNNPE--IVTVGEDGRINLFRADHKEAVRTIDNADSSTLHAVTFLRTPEILTVNS 191
Query: 551 RGHIKIWDLRSEVDKPAASFLLAGDELAATCIINHPTQPHIVLAGSESGSVAI 709
G +KIWD R + ++P+ L GD + C+ HP Q H+V G + G ++I
Sbjct: 192 IGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATGGQDGMLSI 244
>AF514997-1|AAM76708.1| 380|Homo sapiens nucleoporin Nup43 protein.
Length = 380
Score = 97.9 bits (233), Expect = 3e-20
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLH--------NYGNTK 370
DV ++F ++ +I + S G V + + + QT L W + H +Y +
Sbjct: 76 DVMDLQFFDQERIVAASSTGCVTVF-LHHPNNQT-LSVNQQWTTAHYHTGPGSPSYSSAP 133
Query: 371 CSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNI 550
C+ + E I ++GEDG +N+ E RTI ADS +LH++ +L+ E++T N
Sbjct: 134 CTGVVCNNPE--IVTVGEDGRINLFRADHKEAVRTIDNADSSTLHAVTFLRTPEILTVNS 191
Query: 551 RGHIKIWDLRSEVDKPAASFLLAGDELAATCIINHPTQPHIVLAGSESGSVAI 709
G +KIWD R + ++P+ L GD + C+ HP Q H+V G + G ++I
Sbjct: 192 IGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATGGQDGMLSI 244
>BC040121-1|AAH40121.1| 287|Homo sapiens NUP43 protein protein.
Length = 287
Score = 93.5 bits (222), Expect = 7e-19
Identities = 41/119 (34%), Positives = 67/119 (56%)
Frame = +2
Query: 353 NYGNTKCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTE 532
+Y + C+ + E I ++GEDG +N+ E RTI ADS +LH++ +L+ E
Sbjct: 35 SYSSAPCTGVVCNNPE--IVTVGEDGRINLFRADHKEAVRTIDNADSSTLHAVTFLRTPE 92
Query: 533 VITGNIRGHIKIWDLRSEVDKPAASFLLAGDELAATCIINHPTQPHIVLAGSESGSVAI 709
++T N G +KIWD R + ++P+ L GD + C+ HP Q H+V G + G ++I
Sbjct: 93 ILTVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATGGQDGMLSI 151
>BC068485-1|AAH68485.1| 383|Homo sapiens WD repeat domain 55
protein.
Length = 383
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/115 (24%), Positives = 58/115 (50%)
Frame = +2
Query: 242 KNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDTYEGDIASIG 421
++ +A +GDV + S + +T KE+ W S H+ + A S D + + ++
Sbjct: 50 RDLLAAGDVDGDVFVFSYSCQEGET--KEL--WSSGHHLKACRAVAFSEDGQK--LITVS 103
Query: 422 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSE 586
+D +++L +G++ R + A ++S+ + + TG+ G I++WD R E
Sbjct: 104 KDKAIHVLDVEQGQLERRVSKAHGAPINSLLLVDENVLATGDDTGGIRLWDQRKE 158
>AK025355-1|BAB15118.1| 383|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21702 fis, clone COL09874. ).
Length = 383
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/115 (24%), Positives = 58/115 (50%)
Frame = +2
Query: 242 KNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDTYEGDIASIG 421
++ +A +GDV + S + +T KE+ W S H+ + A S D + + ++
Sbjct: 50 RDLLAAGDVDGDVFVFSYSCQEGET--KEL--WSSGHHLKACRAVAFSEDGQK--LITVS 103
Query: 422 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSE 586
+D +++L +G++ R + A ++S+ + + TG+ G I++WD R E
Sbjct: 104 KDKAIHVLDVEQGQLERRVSKAHGAPINSLLLVDENVLATGDDTGGIRLWDQRKE 158
>EF011620-1|ABK41110.1| 358|Homo sapiens CDW10/WDR53 protein.
Length = 358
Score = 37.5 bits (83), Expect = 0.047
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 401 GDIASIG-EDGNVNI--LSGRRGEVNRTIKGADSCSLHSICYLKHTEVI-TGNIRGHIKI 568
G+I S G EDG V I + G + E KG S + +C+L + ++ TG G I +
Sbjct: 209 GNIFSCGAEDGKVRIFRVMGVKCEQELGFKGHTS-GVSQVCFLPESYLLLTGGNDGKITL 267
Query: 569 WDLRSEVDKPAAS 607
WD SEV+K S
Sbjct: 268 WDANSEVEKKQKS 280
>BC054030-1|AAH54030.1| 358|Homo sapiens WD repeat domain 53
protein.
Length = 358
Score = 37.5 bits (83), Expect = 0.047
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 401 GDIASIG-EDGNVNI--LSGRRGEVNRTIKGADSCSLHSICYLKHTEVI-TGNIRGHIKI 568
G+I S G EDG V I + G + E KG S + +C+L + ++ TG G I +
Sbjct: 209 GNIFSCGAEDGKVRIFRVMGVKCEQELGFKGHTS-GVSQVCFLPESYLLLTGGNDGKITL 267
Query: 569 WDLRSEVDKPAAS 607
WD SEV+K S
Sbjct: 268 WDANSEVEKKQKS 280
>BC101616-1|AAI01617.1| 1102|Homo sapiens WD repeat domain 72
protein.
Length = 1102
Score = 34.3 bits (75), Expect = 0.44
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Frame = +2
Query: 503 HSICYLKHTE----VITGNIRGHIKIWDLRSEVDKPAASFLLAGDELAATCII---NHPT 661
HSI + T+ ++TG+ G + +W+L E+ K +A LL G + TC+ +
Sbjct: 18 HSITAIMITDDQRTIVTGSQEGQLCLWNLSHEL-KISAKELLFGHSASVTCLARARDFSK 76
Query: 662 QPHIVLAGSESGSVAI 709
QP+IV A +E+G + +
Sbjct: 77 QPYIVSA-AENGEMCV 91
>BC101614-1|AAI01615.1| 1102|Homo sapiens WD repeat domain 72
protein.
Length = 1102
Score = 34.3 bits (75), Expect = 0.44
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Frame = +2
Query: 503 HSICYLKHTE----VITGNIRGHIKIWDLRSEVDKPAASFLLAGDELAATCII---NHPT 661
HSI + T+ ++TG+ G + +W+L E+ K +A LL G + TC+ +
Sbjct: 18 HSITAIMITDDQRTIVTGSQEGQLCLWNLSHEL-KISAKELLFGHSASVTCLARARDFSK 76
Query: 662 QPHIVLAGSESGSVAI 709
QP+IV A +E+G + +
Sbjct: 77 QPYIVSA-AENGEMCV 91
>AK096055-1|BAC04689.1| 775|Homo sapiens protein ( Homo sapiens
cDNA FLJ38736 fis, clone KIDNE2010989, weakly similar to
Rattus norvegicus TGF-beta resistance-associated protein
(TRAG) ).
Length = 775
Score = 34.3 bits (75), Expect = 0.44
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Frame = +2
Query: 503 HSICYLKHTE----VITGNIRGHIKIWDLRSEVDKPAASFLLAGDELAATCII---NHPT 661
HSI + T+ ++TG+ G + +W+L E+ K +A LL G + TC+ +
Sbjct: 18 HSITAIMITDDQRTIVTGSQEGQLCLWNLSHEL-KISAKELLFGHSASVTCLARARDFSK 76
Query: 662 QPHIVLAGSESGSVAI 709
QP+IV A +E+G + +
Sbjct: 77 QPYIVSA-AENGEMCV 91
>AK074311-1|BAB85046.1| 176|Homo sapiens protein ( Homo sapiens
cDNA FLJ23731 fis, clone HEP14545. ).
Length = 176
Score = 33.9 bits (74), Expect = 0.58
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 614 LAGDELAATCIINHPTQPHIVLAGSESGSVAI 709
L GD + C+ HP Q H+V G + G ++I
Sbjct: 9 LTGDRVPLHCVDRHPNQQHVVATGGQDGMLSI 40
>AY358182-1|AAQ88549.1| 470|Homo sapiens SSGL9393 protein.
Length = 470
Score = 32.7 bits (71), Expect = 1.3
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Frame = +2
Query: 254 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 421
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 327 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 385
Query: 422 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEVDKPA 601
D I + + T+ G L + L + +++G+ +K+WDLRS+V +
Sbjct: 386 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCEEI 445
Query: 602 ASFLL 616
S L
Sbjct: 446 QSLCL 450
>AL355312-1|CAH72860.1| 248|Homo sapiens nucleoporin 43kDa protein.
Length = 248
Score = 32.7 bits (71), Expect = 1.3
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLH--------NYGNTK 370
DV ++F ++ +I + S G V + + + QT L W + H +Y +
Sbjct: 137 DVMDLQFFDQERIVAASSTGCVTVF-LHHPNNQT-LSVNQQWTTAHYHTGPGSPSYSSAP 194
Query: 371 CSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRTIKGADSC 496
C+ + E I ++GEDG +N+ E RTI C
Sbjct: 195 CTGVVCNNPE--IVTVGEDGRINLFRADHKEAVRTIGLVTEC 234
>EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 444
Score = 31.9 bits (69), Expect = 2.3
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = +2
Query: 254 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 421
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 164 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 222
Query: 422 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
D I + + T+ G L + L + +++G+ +K+WDLRS+V
Sbjct: 223 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 278
>EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 588
Score = 31.9 bits (69), Expect = 2.3
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = +2
Query: 254 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 421
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 308 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 366
Query: 422 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
D I + + T+ G L + L + +++G+ +K+WDLRS+V
Sbjct: 367 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 422
>BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein.
Length = 523
Score = 31.9 bits (69), Expect = 2.3
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = +2
Query: 254 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 421
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 243 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 301
Query: 422 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
D I + + T+ G L + L + +++G+ +K+WDLRS+V
Sbjct: 302 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 357
>BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein.
Length = 475
Score = 31.9 bits (69), Expect = 2.3
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = +2
Query: 254 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 421
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 195 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 253
Query: 422 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
D I + + T+ G L + L + +++G+ +K+WDLRS+V
Sbjct: 254 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 309
>BC026213-1|AAH26213.1| 529|Homo sapiens F-box and WD repeat domain
containing 11 protein.
Length = 529
Score = 31.9 bits (69), Expect = 2.3
Identities = 25/134 (18%), Positives = 56/134 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 339 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 398
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 399 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 456
Query: 575 LRSEVDKPAASFLL 616
L++ +D A + L
Sbjct: 457 LQAALDPRAPASTL 470
>AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein.
Length = 607
Score = 31.9 bits (69), Expect = 2.3
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = +2
Query: 254 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 421
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 327 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 385
Query: 422 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
D I + + T+ G L + L + +++G+ +K+WDLRS+V
Sbjct: 386 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 441
>AF176022-1|AAF04528.1| 542|Homo sapiens F-box protein Fbw1b
protein.
Length = 542
Score = 31.9 bits (69), Expect = 2.3
Identities = 25/134 (18%), Positives = 56/134 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 352 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 411
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 412 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 469
Query: 575 LRSEVDKPAASFLL 616
L++ +D A + L
Sbjct: 470 LQAALDPRAPASTL 483
>AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein.
Length = 523
Score = 31.9 bits (69), Expect = 2.3
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = +2
Query: 254 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 421
AV S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 243 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 301
Query: 422 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
D I + + T+ G L + L + +++G+ +K+WDLRS+V
Sbjct: 302 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 357
>AB033281-1|BAA92331.1| 542|Homo sapiens F-box and WD-repeats
protein beta-TRCP2 isoform C protein.
Length = 542
Score = 31.9 bits (69), Expect = 2.3
Identities = 25/134 (18%), Positives = 56/134 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 352 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 411
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 412 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 469
Query: 575 LRSEVDKPAASFLL 616
L++ +D A + L
Sbjct: 470 LQAALDPRAPASTL 483
>AB033280-1|BAA92330.1| 529|Homo sapiens F-box and WD-repeats
protein beta-TRCP2 isoform B protein.
Length = 529
Score = 31.9 bits (69), Expect = 2.3
Identities = 25/134 (18%), Positives = 56/134 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 339 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 398
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 399 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 456
Query: 575 LRSEVDKPAASFLL 616
L++ +D A + L
Sbjct: 457 LQAALDPRAPASTL 470
>AB033279-1|BAA92329.1| 508|Homo sapiens F-box and WD-repeats
protein beta-TRCP2 isoform A protein.
Length = 508
Score = 31.9 bits (69), Expect = 2.3
Identities = 25/134 (18%), Positives = 56/134 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 318 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 377
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 378 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 435
Query: 575 LRSEVDKPAASFLL 616
L++ +D A + L
Sbjct: 436 LQAALDPRAPASTL 449
>AB014596-1|BAA31671.1| 550|Homo sapiens KIAA0696 protein protein.
Length = 550
Score = 31.9 bits (69), Expect = 2.3
Identities = 25/134 (18%), Positives = 56/134 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 360 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 419
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 420 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 477
Query: 575 LRSEVDKPAASFLL 616
L++ +D A + L
Sbjct: 478 LQAALDPRAPASTL 491
>AK222488-1|BAD96208.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 varia
protein.
Length = 317
Score = 31.1 bits (67), Expect = 4.1
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDFNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>M24194-1|AAA59626.1| 317|Homo sapiens MHC B complex protein 12.3
protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein.
Length = 588
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +2
Query: 254 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 421
AV S G ++L D++ L E+F +K + N ++ D + +
Sbjct: 308 AVQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDGAGSYLLAAS 366
Query: 422 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
D I + + T+ G L + L + +++G+ +K+WDLRS+V
Sbjct: 367 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 422
>CR541909-1|CAG46707.1| 317|Homo sapiens GNB2L1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>CR456978-1|CAG33259.1| 317|Homo sapiens GNB2L1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>BC032006-1|AAH32006.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>BC021993-1|AAH21993.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>BC019362-1|AAH19362.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>BC019093-1|AAH19093.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>BC017287-1|AAH17287.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>BC014788-1|AAH14788.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>BC014256-1|AAH14256.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>BC010119-1|AAH10119.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>BC000366-1|AAH00366.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>BC000214-1|AAH00214.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 219 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 265
>AY336089-1|AAR24619.1| 271|Homo sapiens proliferation-inducing
gene 21 protein.
Length = 271
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 113 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 172
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 173 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 219
>AY159316-1|AAO21313.1| 347|Homo sapiens lung cancer oncogene 7
protein.
Length = 347
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 269 NGDVKILEISAYDKQTPLKEIFSWKSLHNY-GNTKCSATSLDTYEGDI-ASIGEDGNVNI 442
N I+ +DK + + + K N+ G+T T + +G + AS G+DG +
Sbjct: 189 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 248
Query: 443 LSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
G+ T+ G D ++++C+ + + IKIWDL ++
Sbjct: 249 WDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIKIWDLEGKI 295
>AK027854-1|BAB55412.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ14948 fis, clone PLACE2000164, weakly similar to
TIPD PROTEIN. ).
Length = 504
Score = 30.3 bits (65), Expect = 7.1
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +2
Query: 254 AVSISNGDVKILEISAYDKQTPLKEIFS----WKSLHNYGNTKCSATSLDTYEGDIASIG 421
A S G ++L D++ L E+F +K + N ++ D+ + +
Sbjct: 224 AAQFSPGS-RLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAAS 282
Query: 422 EDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWDLRSEV 589
D I + + T+ G L + L + +++G+ +K+WDLRS+V
Sbjct: 283 NDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 338
>AB067039-1|BAC02077.1| 122|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 122
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 270 LDIETAILFFSVNFICVTSSSTGYLVRARGYSTSSSFVNTF 148
L ++T+ FS+ VT++ T ARG+S SSS+ N F
Sbjct: 69 LSVDTSKNQFSLKLSSVTAADTAVYYCARGWSGSSSWYNWF 109
>Y14153-1|CAA74572.1| 569|Homo sapiens beta-transducin repeats
containing protein protein.
Length = 569
Score = 29.9 bits (64), Expect = 9.4
Identities = 24/129 (18%), Positives = 53/129 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 379 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 438
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 439 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 496
Query: 575 LRSEVDKPA 601
L + +D A
Sbjct: 497 LVAALDPRA 505
>BC050674-1|AAH50674.1| 341|Homo sapiens THO complex 6 homolog
(Drosophila) protein.
Length = 341
Score = 29.9 bits (64), Expect = 9.4
Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 5/157 (3%)
Frame = +2
Query: 128 ITXFGLLKVLTXDEEVEYPRALTKYPVDDDVTQIKFTEKNKIAVSISNGDVKILEISAYD 307
I F L L+ + + E + + + D ++ +S +G+VK + A
Sbjct: 48 IAIFSLSSALSSEAKEESKKPVVTFQAHDGPVY-SMVSTDRHLLSAGDGEVKAW-LWAEM 105
Query: 308 KQTPLKEIFSWKSLHNYGNT----KCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRT 475
+ KE+ W+ Y + + +A L E + G D ++ + G R
Sbjct: 106 LKKGCKEL--WRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRV 163
Query: 476 IKGADSCSLHSICYLKHT-EVITGNIRGHIKIWDLRS 583
++G +H + + + EV++G G +++WDLR+
Sbjct: 164 LRGHTDY-IHCLALRERSPEVLSGGEDGAVRLWDLRT 199
>BC027994-1|AAH27994.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 29.9 bits (64), Expect = 9.4
Identities = 24/129 (18%), Positives = 53/129 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 475 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 532
Query: 575 LRSEVDKPA 601
L + +D A
Sbjct: 533 LVAALDPRA 541
>BC003118-1|AAH03118.1| 317|Homo sapiens THOC6 protein protein.
Length = 317
Score = 29.9 bits (64), Expect = 9.4
Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 5/157 (3%)
Frame = +2
Query: 128 ITXFGLLKVLTXDEEVEYPRALTKYPVDDDVTQIKFTEKNKIAVSISNGDVKILEISAYD 307
I F L L+ + + E + + + D ++ +S +G+VK + A
Sbjct: 24 IAIFSLSSALSSEAKEESKKPVVTFQAHDGPVY-SMVSTDRHLLSAGDGEVKAW-LWAEM 81
Query: 308 KQTPLKEIFSWKSLHNYGNT----KCSATSLDTYEGDIASIGEDGNVNILSGRRGEVNRT 475
+ KE+ W+ Y + + +A L E + G D ++ + G R
Sbjct: 82 LKKGCKEL--WRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRV 139
Query: 476 IKGADSCSLHSICYLKHT-EVITGNIRGHIKIWDLRS 583
++G +H + + + EV++G G +++WDLR+
Sbjct: 140 LRGHTDY-IHCLALRERSPEVLSGGEDGAVRLWDLRT 175
>AL627424-18|CAI41043.1| 569|Homo sapiens beta-transducin repeat
containing protein.
Length = 569
Score = 29.9 bits (64), Expect = 9.4
Identities = 24/129 (18%), Positives = 53/129 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 379 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 438
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 439 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 496
Query: 575 LRSEVDKPA 601
L + +D A
Sbjct: 497 LVAALDPRA 505
>AL627424-17|CAI41042.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 29.9 bits (64), Expect = 9.4
Identities = 24/129 (18%), Positives = 53/129 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 475 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 532
Query: 575 LRSEVDKPA 601
L + +D A
Sbjct: 533 LVAALDPRA 541
>AL445463-3|CAI12964.1| 569|Homo sapiens beta-transducin repeat
containing protein.
Length = 569
Score = 29.9 bits (64), Expect = 9.4
Identities = 24/129 (18%), Positives = 53/129 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 379 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 438
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 439 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 496
Query: 575 LRSEVDKPA 601
L + +D A
Sbjct: 497 LVAALDPRA 505
>AL445463-2|CAI12963.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 29.9 bits (64), Expect = 9.4
Identities = 24/129 (18%), Positives = 53/129 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 475 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 532
Query: 575 LRSEVDKPA 601
L + +D A
Sbjct: 533 LVAALDPRA 541
>AL133387-2|CAH70019.1| 569|Homo sapiens beta-transducin repeat
containing protein.
Length = 569
Score = 29.9 bits (64), Expect = 9.4
Identities = 24/129 (18%), Positives = 53/129 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 379 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 438
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 439 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 496
Query: 575 LRSEVDKPA 601
L + +D A
Sbjct: 497 LVAALDPRA 505
>AL133387-1|CAH70020.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 29.9 bits (64), Expect = 9.4
Identities = 24/129 (18%), Positives = 53/129 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 475 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 532
Query: 575 LRSEVDKPA 601
L + +D A
Sbjct: 533 LVAALDPRA 541
>AF129530-1|AAF04464.1| 569|Homo sapiens F-box protein Fbw1A
protein.
Length = 569
Score = 29.9 bits (64), Expect = 9.4
Identities = 24/129 (18%), Positives = 53/129 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 379 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 438
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 439 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 496
Query: 575 LRSEVDKPA 601
L + +D A
Sbjct: 497 LVAALDPRA 505
>AF101784-1|AAD08702.1| 605|Homo sapiens b-TRCP variant
E3RS-IkappaB protein.
Length = 605
Score = 29.9 bits (64), Expect = 9.4
Identities = 24/129 (18%), Positives = 53/129 (41%)
Frame = +2
Query: 215 DVTQIKFTEKNKIAVSISNGDVKILEISAYDKQTPLKEIFSWKSLHNYGNTKCSATSLDT 394
D+T + ++ AV++ + D K + ++ D+ + + + + K L
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Query: 395 YEGDIASIGEDGNVNILSGRRGEVNRTIKGADSCSLHSICYLKHTEVITGNIRGHIKIWD 574
+ + S D + + G R ++G + L + +++G G IK+WD
Sbjct: 475 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWD 532
Query: 575 LRSEVDKPA 601
L + +D A
Sbjct: 533 LVAALDPRA 541
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,700,571
Number of Sequences: 237096
Number of extensions: 2022978
Number of successful extensions: 4129
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 3888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4129
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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