Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1060
         (679 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007225-1|AAP35889.1|  382|Homo sapiens protein kinase, cAMP-de...    32   2.2  
BC002763-1|AAH02763.1|  382|Homo sapiens PRKAR2A protein protein.      32   2.2  
X14940-5|CAA33071.1|  109|Homo sapiens protein ( Human C mu gene...    30   8.7  
X14940-4|CAA33070.1|  129|Homo sapiens protein ( Human C mu gene...    30   8.7  

>BT007225-1|AAP35889.1|  382|Homo sapiens protein kinase,
           cAMP-dependent, regulatory, type II, alpha protein.
          Length = 382

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = +3

Query: 375 ESAKVENRVRSGDVTGSYIYKDGKNDLIKVRYWSDRDGFHQE 500
           +S +V  R++  DV G  IYKDG+  + + +  S++DG +QE
Sbjct: 263 KSLEVSERMKIVDVIGEKIYKDGERIITQTK--SNKDGGNQE 302


>BC002763-1|AAH02763.1|  382|Homo sapiens PRKAR2A protein protein.
          Length = 382

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = +3

Query: 375 ESAKVENRVRSGDVTGSYIYKDGKNDLIKVRYWSDRDGFHQE 500
           +S +V  R++  DV G  IYKDG+  + + +  S++DG +QE
Sbjct: 263 KSLEVSERMKIVDVIGEKIYKDGERIITQTK--SNKDGGNQE 302


>X14940-5|CAA33071.1|  109|Homo sapiens protein ( Human C mu gene
           for IgM heavy chain exons CH1-4, secretory. ).
          Length = 109

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = +3

Query: 114 EPEEAQKYLNSPPFTDPQLAGRTAVLPLIKYNDPRFRTVEAGPTLGHYWKNGKEIENTED 293
           +P   +KY+ S P  +PQ  GR     ++  ++  + T E    + H     +  E T D
Sbjct: 47  QPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVAHEALPNRVTERTVD 106


>X14940-4|CAA33070.1|  129|Homo sapiens protein ( Human C mu gene
           for IgM heavy chain exons CH1-4, secretory. ).
          Length = 129

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = +3

Query: 114 EPEEAQKYLNSPPFTDPQLAGRTAVLPLIKYNDPRFRTVEAGPTLGHYWKNGKEIENTED 293
           +P   +KY+ S P  +PQ  GR     ++  ++  + T E    + H     +  E T D
Sbjct: 47  QPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVAHEALPNRVTERTVD 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,392,125
Number of Sequences: 237096
Number of extensions: 2032085
Number of successful extensions: 8811
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8811
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)