Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1059
(601 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 23 2.3
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 2.3
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 7.0
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 7.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 7.0
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 7.0
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 7.0
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 7.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 7.0
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 9.2
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 9.2
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 9.2
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 9.2
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 9.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.2
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.2
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 21 9.2
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 108 RPSPYLKKKYP 76
RP P LKK+YP
Sbjct: 32 RPKPLLKKEYP 42
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 23.0 bits (47), Expect = 2.3
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 524 FESSKLWKLLNNLF 565
F +S+ W++ NNLF
Sbjct: 213 FRNSRSWRITNNLF 226
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 7.0
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = -2
Query: 276 RSFTLASEQRYTKFQLKFAVKKETVKTFTQRYIYRNEKKN*VPLKYYSENVTENVERPSP 97
R + S++R + + K+ + + N N L+YY+ N E + P P
Sbjct: 57 RKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVP 116
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 7.0
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = -2
Query: 276 RSFTLASEQRYTKFQLKFAVKKETVKTFTQRYIYRNEKKN*VPLKYYSENVTENVERPSP 97
R + S++R + + K+ + + N N L+YY+ N E + P P
Sbjct: 57 RKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVP 116
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 7.0
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = -2
Query: 276 RSFTLASEQRYTKFQLKFAVKKETVKTFTQRYIYRNEKKN*VPLKYYSENVTENVERPSP 97
R + S++R + + K+ + + N N L+YY+ N E + P P
Sbjct: 57 RKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVP 116
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 7.0
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = -2
Query: 276 RSFTLASEQRYTKFQLKFAVKKETVKTFTQRYIYRNEKKN*VPLKYYSENVTENVERPSP 97
R + S++R + + K+ + + N N L+YY+ N E + P P
Sbjct: 57 RKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVP 116
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.0
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -2
Query: 201 KTFTQRYIYRNEKKN*VPLKYYSENVTENVERPSP 97
KT Y N N YY+ N E V P P
Sbjct: 88 KTIHNNNNYNNNNYNNYKKLYYNINYIEQVPVPIP 122
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = -2
Query: 183 YIYRNEKKN*VPLKYYSENVTENVERPSP 97
Y Y N N YY+ N E + P P
Sbjct: 104 YNYNNNNYNNYKKLYYNINYIEQIPVPVP 132
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 7.0
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = -2
Query: 276 RSFTLASEQRYTKFQLKFAVKKETVKTFTQRYIYRNEKKN*VPLKYYSENVTENVERPSP 97
R + S++R + + K+ + + N N L+YY+ N E + P P
Sbjct: 290 RKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVP 349
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/43 (23%), Positives = 16/43 (37%)
Frame = -2
Query: 204 VKTFTQRYIYRNEKKN*VPLKYYSENVTENVERPSPYLKKKYP 76
+ + + Y Y N N Y+ N E + P P +P
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNFP 124
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/43 (23%), Positives = 16/43 (37%)
Frame = -2
Query: 204 VKTFTQRYIYRNEKKN*VPLKYYSENVTENVERPSPYLKKKYP 76
+ + + Y Y N N Y+ N E + P P +P
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNFP 124
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/43 (23%), Positives = 16/43 (37%)
Frame = -2
Query: 204 VKTFTQRYIYRNEKKN*VPLKYYSENVTENVERPSPYLKKKYP 76
+ + + Y Y N N Y+ N E + P P +P
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNFP 124
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/43 (23%), Positives = 16/43 (37%)
Frame = -2
Query: 204 VKTFTQRYIYRNEKKN*VPLKYYSENVTENVERPSPYLKKKYP 76
+ + + Y Y N N Y+ N E + P P +P
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNFP 124
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/43 (23%), Positives = 16/43 (37%)
Frame = -2
Query: 204 VKTFTQRYIYRNEKKN*VPLKYYSENVTENVERPSPYLKKKYP 76
+ + + Y Y N N Y+ N E + P P +P
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNFP 124
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 139 VLKRNLIFLFVAVNISLC 192
+L + LIF + V+IS+C
Sbjct: 306 LLGKYLIFAMILVSISIC 323
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 139 VLKRNLIFLFVAVNISLC 192
+L + LIF + V+IS+C
Sbjct: 306 LLGKYLIFAMILVSISIC 323
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 105 PSPYLKKKYP 76
P P LKK+YP
Sbjct: 1 PKPLLKKEYP 10
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,641
Number of Sequences: 438
Number of extensions: 2140
Number of successful extensions: 28
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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