Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1054
         (647 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87432-1|BAA13376.2|  552|Homo sapiens KIAA0245 protein.               30   6.2  
BC028216-1|AAH28216.1|  515|Homo sapiens solute carrier family 7...    30   6.2  

>D87432-1|BAA13376.2|  552|Homo sapiens KIAA0245 protein.
          Length = 552

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 496 TIKNLLGLALSLRNITFYFEGIFL 567
           TI +L+G+ ++L  + FYF G++L
Sbjct: 485 TINSLIGIGIALSGVPFYFMGVYL 508


>BC028216-1|AAH28216.1|  515|Homo sapiens solute carrier family 7
           (cationic amino acid transporter, y+ system), member 6
           protein.
          Length = 515

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 496 TIKNLLGLALSLRNITFYFEGIFL 567
           TI +L+G+ ++L  + FYF G++L
Sbjct: 448 TINSLIGIGIALSGVPFYFMGVYL 471


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,565,004
Number of Sequences: 237096
Number of extensions: 1212390
Number of successful extensions: 1185
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)