Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1035
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF348451-1|AAK30157.1|  361|Homo sapiens hepatic peroxysomal ala...    31   2.5  
AL590377-2|CAI14630.2| 1406|Homo sapiens chromosome 9 open readi...    30   5.7  
AL354738-1|CAI16195.2| 1406|Homo sapiens chromosome 9 open readi...    30   5.7  
AL354711-1|CAH72682.2| 1406|Homo sapiens chromosome 9 open readi...    30   5.7  
AL162725-3|CAH70424.1| 1406|Homo sapiens chromosome 9 open readi...    30   5.7  
AL133214-3|CAH70743.2| 1406|Homo sapiens chromosome 9 open readi...    30   5.7  
AK021596-1|BAB13850.1|  619|Homo sapiens protein ( Homo sapiens ...    30   5.7  
AK000283-1|BAA91052.1| 1084|Homo sapiens protein ( Homo sapiens ...    30   5.7  

>AF348451-1|AAK30157.1|  361|Homo sapiens hepatic peroxysomal
           alanine:glyoxylate aminotransferase protein.
          Length = 361

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +2

Query: 431 LDVLYTYLTLSNNVTVYVTFLFDHVEEKKKEMSNLVKEWSFFFLIEWLMGF 583
           +D+LY+    + N     + +F   + KKK  S   K +SF+  I+WL  F
Sbjct: 170 IDILYSGSQKALNAPPGTSLIFFSDKAKKKMYSRKTKPFSFYLDIKWLANF 220


>AL590377-2|CAI14630.2| 1406|Homo sapiens chromosome 9 open reading
            frame 39 protein.
          Length = 1406

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = -3

Query: 322  NKNVRSIGFYLLKKTDFKD*IHQLYNRQKLEITMLKSILKSVNIHNKTLLNIEGTGPF 149
            + NV+++ F LL K +    +H+  +R + +ITM + +++ +    K  +N+E    F
Sbjct: 1112 SSNVKTLKFELLAKEEHIKEMHEKISRMERDITMKRHLIEDLKFRQK--VNLESNKSF 1167


>AL354738-1|CAI16195.2| 1406|Homo sapiens chromosome 9 open reading
            frame 39 protein.
          Length = 1406

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = -3

Query: 322  NKNVRSIGFYLLKKTDFKD*IHQLYNRQKLEITMLKSILKSVNIHNKTLLNIEGTGPF 149
            + NV+++ F LL K +    +H+  +R + +ITM + +++ +    K  +N+E    F
Sbjct: 1112 SSNVKTLKFELLAKEEHIKEMHEKISRMERDITMKRHLIEDLKFRQK--VNLESNKSF 1167


>AL354711-1|CAH72682.2| 1406|Homo sapiens chromosome 9 open reading
            frame 39 protein.
          Length = 1406

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = -3

Query: 322  NKNVRSIGFYLLKKTDFKD*IHQLYNRQKLEITMLKSILKSVNIHNKTLLNIEGTGPF 149
            + NV+++ F LL K +    +H+  +R + +ITM + +++ +    K  +N+E    F
Sbjct: 1112 SSNVKTLKFELLAKEEHIKEMHEKISRMERDITMKRHLIEDLKFRQK--VNLESNKSF 1167


>AL162725-3|CAH70424.1| 1406|Homo sapiens chromosome 9 open reading
            frame 39 protein.
          Length = 1406

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = -3

Query: 322  NKNVRSIGFYLLKKTDFKD*IHQLYNRQKLEITMLKSILKSVNIHNKTLLNIEGTGPF 149
            + NV+++ F LL K +    +H+  +R + +ITM + +++ +    K  +N+E    F
Sbjct: 1112 SSNVKTLKFELLAKEEHIKEMHEKISRMERDITMKRHLIEDLKFRQK--VNLESNKSF 1167


>AL133214-3|CAH70743.2| 1406|Homo sapiens chromosome 9 open reading
            frame 39 protein.
          Length = 1406

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = -3

Query: 322  NKNVRSIGFYLLKKTDFKD*IHQLYNRQKLEITMLKSILKSVNIHNKTLLNIEGTGPF 149
            + NV+++ F LL K +    +H+  +R + +ITM + +++ +    K  +N+E    F
Sbjct: 1112 SSNVKTLKFELLAKEEHIKEMHEKISRMERDITMKRHLIEDLKFRQK--VNLESNKSF 1167


>AK021596-1|BAB13850.1|  619|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11534 fis, clone HEMBA1002679. ).
          Length = 619

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = -3

Query: 322 NKNVRSIGFYLLKKTDFKD*IHQLYNRQKLEITMLKSILKSVNIHNKTLLNIEGTGPF 149
           + NV+++ F LL K +    +H+  +R + +ITM + +++ +    K  +N+E    F
Sbjct: 426 SSNVKTLKFELLAKEEHIKEMHEKISRMERDITMKRHLIEDLKFRQK--VNLESNKSF 481


>AK000283-1|BAA91052.1| 1084|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20276 fis, clone HEP02437. ).
          Length = 1084

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = -3

Query: 322 NKNVRSIGFYLLKKTDFKD*IHQLYNRQKLEITMLKSILKSVNIHNKTLLNIEGTGPF 149
           + NV+++ F LL K +    +H+  +R + +ITM + +++ +    K  +N+E    F
Sbjct: 791 SSNVKTLKFELLAKEEHIKEMHEKISRMERDITMKRHLIEDLKFRQK--VNLESNKSF 846


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,351,036
Number of Sequences: 237096
Number of extensions: 1267118
Number of successful extensions: 1464
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)