Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1031
(478 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 25 0.32
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 25 0.32
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 25 0.32
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 25 0.42
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 1.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 3.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.0
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.32
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 236 KKQNHFLKKDIPRIYLETNIIGSKGSIERTKSKLDKLFALRTVLRKFYEFNDIRNEFKNL 415
++QN + + R Y ET+ S+ ER KSK K+ + L Y +N+ N +K L
Sbjct: 45 REQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKII---SSLSNNYNYNN--NNYKKL 99
Query: 416 F 418
+
Sbjct: 100 Y 100
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.32
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 236 KKQNHFLKKDIPRIYLETNIIGSKGSIERTKSKLDKLFALRTVLRKFYEFNDIRNEFKNL 415
++QN + + R Y ET+ S+ ER KSK K+ + L Y +N+ N +K L
Sbjct: 45 REQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKII---SSLSNNYNYNN--NNYKKL 99
Query: 416 F 418
+
Sbjct: 100 Y 100
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.32
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 236 KKQNHFLKKDIPRIYLETNIIGSKGSIERTKSKLDKLFALRTVLRKFYEFNDIRNEFKNL 415
++QN + + R Y ET+ S+ ER KSK K+ + L Y +N+ N +K L
Sbjct: 45 REQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKII---SSLSNNYNYNN--NNYKKL 99
Query: 416 F 418
+
Sbjct: 100 Y 100
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 25.0 bits (52), Expect = 0.42
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 250 MILFLQPFLQNIDGLIHFSFIVTVQHLYLLRR--AFGNF 140
++ FLQPF + L+ S V LYLL R FG F
Sbjct: 557 LVSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFGRF 595
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 1.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -3
Query: 116 NTFRYGFKSKRKLNNTNVNQ 57
N ++Y + +K NN N N+
Sbjct: 94 NNYKYNYNNKYNYNNNNYNK 113
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 202 E*GRRYFGGMAEETESFPEERYSKNILGDEYNRKQRFYR 318
E RRY + E E EER S+N R+Q Y+
Sbjct: 14 EKNRRY-EKLHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 202 E*GRRYFGGMAEETESFPEERYSKNILGDEYNRKQRFYR 318
E RRY + E E EER S+N R+Q Y+
Sbjct: 14 EKNRRY-EKLHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 202 E*GRRYFGGMAEETESFPEERYSKNILGDEYNRKQRFYR 318
E RRY + E E EER S+N R+Q Y+
Sbjct: 14 EKNRRY-EKLHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 202 E*GRRYFGGMAEETESFPEERYSKNILGDEYNRKQRFYR 318
E RRY + E E EER S+N R+Q Y+
Sbjct: 14 EKNRRY-EKLHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 202 E*GRRYFGGMAEETESFPEERYSKNILGDEYNRKQRFYR 318
E RRY + E E EER S+N R+Q Y+
Sbjct: 14 EKNRRY-EKLHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 202 E*GRRYFGGMAEETESFPEERYSKNILGDEYNRKQRFYR 318
E RRY + E E EER S+N R+Q Y+
Sbjct: 14 EKNRRY-EKLHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 202 E*GRRYFGGMAEETESFPEERYSKNILGDEYNRKQRFYR 318
E RRY + E E EER S+N R+Q Y+
Sbjct: 14 EKNRRY-EKLHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -3
Query: 263 LSSGNDSVSSAIPPKYRRPHSFFFHRNRTTFVSAAP 156
L ++ ++ + P HSF +H + T A+P
Sbjct: 1719 LGGAAEASAAGLHPNNTLLHSFMYHEHAMTEGCASP 1754
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -3
Query: 263 LSSGNDSVSSAIPPKYRRPHSFFFHRNRTTFVSAAP 156
L ++ ++ + P HSF +H + T A+P
Sbjct: 1715 LGGAAEASAAGLHPNNTLLHSFMYHEHAMTEGCASP 1750
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 9.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 296 LYSSPSIFLEYLSSGN 249
L PS+FL+ ++SGN
Sbjct: 405 LQPGPSMFLKCVASGN 420
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,932
Number of Sequences: 438
Number of extensions: 2693
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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