Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1027
(708 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptida... 34 0.017
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 31 0.21
SPCC1322.02 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 30 0.37
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 29 0.49
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 29 0.65
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 29 0.65
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 29 0.65
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 29 0.65
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 29 0.86
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 28 1.1
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 27 2.0
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 27 2.6
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 27 2.6
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 27 2.6
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 2.6
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 27 3.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.5
SPCC1020.11c |||DUF786 family protein|Schizosaccharomyces pombe|... 26 4.6
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 26 6.1
SPBC646.15c |||Pex16 family protein|Schizosaccharomyces pombe|ch... 26 6.1
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 8.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 8.0
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 25 8.0
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 25 8.0
>SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptidase
complex alpha subunit Mas2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 494
Score = 34.3 bits (75), Expect = 0.017
Identities = 22/93 (23%), Positives = 37/93 (39%)
Frame = +2
Query: 203 NEKVDPSQNSRSLFSTTVNAEIKTKPKTLPASDNIFAKAMTNKTKENIADSIFQNKNTSI 382
N S+ S + N ++K+ K L ++ + A + + DSI +
Sbjct: 117 NYMCSTSRESMIYQAAVFNDDVKSMSKLL--AETVLAPKIQEDDLVHYRDSIIYENSELW 174
Query: 383 GKDNIFTKNATHFTKFNENTAGNSIFAKPEKVD 481
K + H T F NT GN + P+KV+
Sbjct: 175 TKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVN 207
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 30.7 bits (66), Expect = 0.21
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 4/131 (3%)
Frame = +2
Query: 224 QNSRSLFSTTVNAEIKTKPKTLPASDNIFAKAMTNKTKENIADSIFQNKNTSIGKDNIFT 403
QN+ + + T PK PA +F + N A + + G N T
Sbjct: 468 QNANNAPKPAFGSTATTAPK--PAGTGLFG-GLGAGANTNTATNATGTGGSLFGNAN--T 522
Query: 404 KNATHFTKFNENTAGNSIFAKPEKVDESDARCQNIFGGFG----KTDKSIFSKPHVLDGG 571
+ F N +T G +F + + + +FG T S+F+KP GG
Sbjct: 523 AGSNMFGSANSSTPGTGLFGSTQTNNATSNTGTGLFGSNNANTTNTGGSLFNKPSTTTGG 582
Query: 572 SFNKLNGEDKS 604
F + S
Sbjct: 583 LFGNTTAQQPS 593
>SPCC1322.02 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 351
Score = 29.9 bits (64), Expect = 0.37
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +2
Query: 47 NTVDSNIR-TDAISKF--KVQHGRSSFEVKSSSPEKSNATYIRPSNSNTSVFQKVNEKVD 217
N D N+ DA F KVQ R +V ++ +K+ ++++ N+N F KV +
Sbjct: 13 NLNDVNVEENDAAQSFAEKVQRFRYQMKVHAAPRQKTLHSFLKKDNANIHDFTKVEKPHI 72
Query: 218 PSQNSRSLFSTTVNAEIKTKPKTLPASDNIFAKAMT 325
S S+ +++ + K + + D + ++++T
Sbjct: 73 RSSKSKVSYNSITSRVTKYFEEKNNSVDQLHSESLT 108
>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 920
Score = 29.5 bits (63), Expect = 0.49
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +2
Query: 20 HEDSFSKPQNTVDSNIRTDAISKFKVQ----HGRSSFEVKSSSPEKSNATYIRPSNSNTS 187
H D N + N+ TD + ++ HG + SS + R S+TS
Sbjct: 56 HGDGDMSLGNLSELNVATDLLESLDLRSMYMHGYGHLDSSFSSQHSPDN---RKRMSSTS 112
Query: 188 VFQKVNEKVDPSQNSRSLFSTTVNAEIKTKPKTLPASDNIFAKAMTNKTKENIADSIFQN 367
VF+++N + + S + + T+N+ + +L +D I A T +N+A+ F
Sbjct: 113 VFKRINSEEEGRIPSLTYSAGTMNS-TSSSTASLKGAD-IVADYETFNPDQNLAELSFDR 170
Query: 368 KNTS 379
+S
Sbjct: 171 SKSS 174
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 29.1 bits (62), Expect = 0.65
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +2
Query: 170 SNSNTSVFQKVNEK----VDPSQNSRSLFSTTVNAEIKTKPKTLPAS 298
S+ T+ F++ ++ VD ++ S S+ T+ NA+I K LP++
Sbjct: 235 SSEQTAAFEEYDDDDDDDVDDNEQSNSMIETSANADITPKASLLPST 281
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 29.1 bits (62), Expect = 0.65
Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Frame = +2
Query: 221 SQNSRSLFSTTVNAEIKTKPKTLPASDNIFAKAMTNKTKENIADSIFQNKNTS-IGKDNI 397
+QNS F + PA+ +F N + + +F + N S +
Sbjct: 8 NQNSGFSFGKPAQPNSAAQGAATPAATGLFGNTNNNTSSTAPSGGLFGSNNASNTSAPST 67
Query: 398 FTKNATHFTKFNENTAGNSIFAKPEKVDESDARCQNIFGGFGKT 529
F+ T + N + +S F+ + A + +FGG G T
Sbjct: 68 FSFGKAATTGNSTNASTSSPFSFGSTNTNNTAGAKPLFGGLGST 111
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 29.1 bits (62), Expect = 0.65
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = +2
Query: 125 KSSSPEKSNATYIRPSNSNTSVFQKVNEKVDPSQNSRSLFSTTVNAEIKTKPKTLPASDN 304
K++SP+K+ + P + ++V D S+ S+ A +PK P++ N
Sbjct: 74 KATSPKKATPAAVAPVEATSAV--------DTSEAVASMTPNKRKARDPAQPKRPPSAYN 125
Query: 305 IFAKAMTNKTKENIAD 352
+F K ++ KE++ +
Sbjct: 126 LFQKNQRSEIKESLGE 141
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 29.1 bits (62), Expect = 0.65
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 110 SSFEVKSSSPEKSNATYIRPSNSNTSVFQKVNEKVDPSQNSRSLFSTTVNAEIKTKPKTL 289
SS E +SS S PSN+ TS+ V + + NS S T + I K+L
Sbjct: 251 SSIEPPASSASTSPRNTPTPSNNGTSINANVTSSL--TSNSTGKTSKTTDLLIAASKKSL 308
Query: 290 PAS 298
P++
Sbjct: 309 PSN 311
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.7 bits (61), Expect = 0.86
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +2
Query: 17 RHEDSFSKPQNTVDSNIRTDAISKFKVQHGRSSFEVKSSSPEKS-NATYIRPS--NSNTS 187
R +SF+ V RT+ ++ ++H RS+ +S SP S ++ +RPS S +S
Sbjct: 664 RMSNSFASQTKQVFGEQRTENSARESLRHSRSNMS-RSPSPMLSRRSSTLRPSFERSASS 722
Query: 188 VFQKVNEKVDPSQNSRS 238
+ + ++ V P+ ++R+
Sbjct: 723 LSVRQSDVVSPAPSTRA 739
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 28.3 bits (60), Expect = 1.1
Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 1/191 (0%)
Frame = +2
Query: 80 ISKFKVQHGRSSFEVKSSSPEKSNATYIRPSNSNTSVFQKVNEKVDPSQNSRSLFSTTVN 259
IS Q RSSF+V+ RP+ N++V + +S S F
Sbjct: 248 ISSEAAQASRSSFQVERH----------RPTPDNSAVIEAARRTYSSISSSSSPFKKKTQ 297
Query: 260 AEIKTKPKTLPASDNIFAKAMTNKTKENIADSIFQNKNTSIGKDNIFT-KNATHFTKFNE 436
+ + + +P+ +K+ T+ +A S+ +S+ K T ++A +
Sbjct: 298 SHLPNRTTEVPSISKQLSKSSTSIA--TVAPSL--ASVSSVTKSPSPTPQSAPRAQSAST 353
Query: 437 NTAGNSIFAKPEKVDESDARCQNIFGGFGKTDKSIFSKPHVLDGGSFNKLNGEDKSINKL 616
TA + F P ++ ++ +++ + S K +DG F E++ I K
Sbjct: 354 ETAQDLDFLTPPRLSVNNPFLSDLYPASEQGLSSCEEKDSPVDGDEFFNHTNEEEIIEKQ 413
Query: 617 SPGTLFKSATT 649
T + T+
Sbjct: 414 FQSTSISAMTS 424
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 491 ARCQNIFGGFGKTDKSIFSKPHVLDGGSF 577
A I FG+T K +F KPH G F
Sbjct: 2178 AAAVGIIHNFGQTPKQVFKKPHPQRGPDF 2206
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 389 DNIFTKNATHFTKFNENTAGNSIFAKPEKVDESDARCQNIFGGFG 523
D++FT+ + F N+N++ S + V +S+ N+FGGFG
Sbjct: 124 DDVFTETNSGFRSSNQNSSLKSF----QSVPDSNV---NVFGGFG 161
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 27.1 bits (57), Expect = 2.6
Identities = 22/95 (23%), Positives = 42/95 (44%)
Frame = +2
Query: 26 DSFSKPQNTVDSNIRTDAISKFKVQHGRSSFEVKSSSPEKSNATYIRPSNSNTSVFQKVN 205
D F Q + D N+R D +S F + SS +++SS N+ + + S+ +N
Sbjct: 1724 DGFPDLQVSSDINVRNDRLSSFVM----SSEDLRSSDGHPENSDSVLETISSVHHRSPIN 1779
Query: 206 EKVDPSQNSRSLFSTTVNAEIKTKPKTLPASDNIF 310
+ V S+ + ++ + K L ++N F
Sbjct: 1780 QVVRNLNESQLSLDSVISMNL-NKEFALTKTENDF 1813
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 128 SSSPEKSNATYIRPSNSNTSVFQK-----VNEKVDPSQNSRSLFSTTVNAEIKTKPKTLP 292
SS S A+ + S + +S +K + KV+P +S S+ T + K P T+P
Sbjct: 400 SSQDNSSKASLVENSQTQSSTPRKPLPTTTSPKVNPEPHSESISDTRPSTPRKVPPSTVP 459
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 603 DLSSPFNLLNEPPSKTCGLENMLLSVLPK 517
D SS N+L+E SK EN L +LPK
Sbjct: 322 DESSKLNILSELESKISEKENELSEILPK 350
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 26.6 bits (56), Expect = 3.5
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = +2
Query: 119 EVKSSSPEKSNATYIRPSNSNTSVFQKVNEKVDPSQNSRSLFST--TVN---AEIKTKPK 283
+ K P +PS+ ++S VNEK S S ++ S+ VN AE +
Sbjct: 119 QTKQKKPSVRGRRGRKPSSLSSSTLHSVNEKQPNSSISPTIESSMNKVNLPGAEEQVSAT 178
Query: 284 TLPASDNIFAKAMTNKTK 337
LPAS N N K
Sbjct: 179 PLPASPNALLSPNDNTIK 196
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 3.5
Identities = 29/107 (27%), Positives = 44/107 (41%)
Frame = +2
Query: 110 SSFEVKSSSPEKSNATYIRPSNSNTSVFQKVNEKVDPSQNSRSLFSTTVNAEIKTKPKTL 289
S++ + SS+P S T + +N TS S NS S ST V+ T P T
Sbjct: 571 SNYTISSSTPVTS--TPVTTTNCTTSTSVLYTSTPITSPNSTSSSSTQVSWN-STTPITG 627
Query: 290 PASDNIFAKAMTNKTKENIADSIFQNKNTSIGKDNIFTKNATHFTKF 430
++ + + T N + F +TSI + + AT T F
Sbjct: 628 TSTSKVTSSTSIPLTSTNRTSTTF-TSSTSISTSS--SSTATSSTSF 671
>SPCC1020.11c |||DUF786 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 102
Score = 26.2 bits (55), Expect = 4.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 384 PILVFLF*NIESAMFSFVLLVIALANILSLAGRVLGFVFISALTVVLNKLR 232
P +V N+ S+ F ++ L + LA VLG+ F+S L L K+R
Sbjct: 3 PKVVSFVRNLTSSFFGCAAGILGLTSYEGLALYVLGYFFVSFLLFAL-KMR 52
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 101 HGRSSFEVKSSSPEKSNATYIRPSNSNTSVFQKVNEKVDPSQN--SRSLFSTTVNAEIKT 274
HGR S + + N T P + N++ K +K+DP + + LFS + + T
Sbjct: 710 HGRMSTSTTNRQKQILNETMGNPVDKNSTSPSKSTDKLDPIKPVFLKGLFSVSTTSTKST 769
Query: 275 K 277
+
Sbjct: 770 E 770
>SPBC646.15c |||Pex16 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 376
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 225 KIHEVYSVLLLMPK*RQNLKLYQLAIIYLPKQ*LTKQRRTLPTRYFKTKILVLEKI 392
K + S+LLL+ + L ++A + +Q + K RT YF+ K EK+
Sbjct: 45 KSQTITSILLLLHQFHTGLLFRKIAELPKTEQAILKSERTQYLEYFRKKNPSFEKV 100
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 25.4 bits (53), Expect = 8.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 408 FFVNILSFPILVFLF*NIESAMFSFVLLVIALANILSLA 292
F V SFPIL FLF + F+ + +L+++LSLA
Sbjct: 143 FIVYFSSFPILHFLF-FFFLCVCVFLSFLFSLSHLLSLA 180
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 8.0
Identities = 19/105 (18%), Positives = 42/105 (40%)
Frame = +2
Query: 29 SFSKPQNTVDSNIRTDAISKFKVQHGRSSFEVKSSSPEKSNATYIRPSNSNTSVFQKVNE 208
SFS + S I + + S ++ KSSS S + ++S+T +
Sbjct: 331 SFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSS 390
Query: 209 KVDPSQNSRSLFSTTVNAEIKTKPKTLPASDNIFAKAMTNKTKEN 343
S +S S ++ + +K + P S + + ++++ +
Sbjct: 391 SRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSH 435
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -3
Query: 409 IFRKYIIFSNTSIFVLKYRVGNVLLCFVSHCFGKYII 299
I +++++F + I + GN LLC V++ G+ ++
Sbjct: 805 IRKRHLVFESRGICCQSWFTGNKLLCAVAYDAGRKLL 841
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 77 AISKFKVQHGRSSFEVKSSSPEKSNATYIR 166
A + F VQ G+ F + SP+ S Y+R
Sbjct: 335 AANVFDVQTGKKLFTLHEESPDPSRDLYVR 364
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,031,667
Number of Sequences: 5004
Number of extensions: 66194
Number of successful extensions: 260
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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