Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1027
(708 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0922 - 22612773-22613321,22613616-22614189,22614389-226144... 31 0.68
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 31 0.68
11_01_0017 - 129261-129335,129352-129426,129565-129645,129929-13... 31 0.90
02_01_0325 - 2208480-2208674,2208772-2210609,2210980-2211109,221... 31 1.2
02_03_0199 + 16263549-16263644,16264941-16265899,16267140-162677... 30 1.6
11_02_0123 - 8550193-8550213,8550434-8550682,8550787-8550834,855... 29 2.7
06_01_0801 - 5993726-5994160,5994811-5994969,5995071-5995211,599... 29 2.7
03_02_0232 + 6614784-6614882,6616145-6616477,6616708-6616967,661... 29 2.7
02_02_0156 - 7277793-7277875,7278535-7278638,7278808-7279211,727... 29 2.7
01_03_0003 + 11509530-11512772 29 3.6
11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,348... 29 4.8
03_06_0769 + 36134298-36134356,36134740-36134919,36134975-361350... 29 4.8
03_02_0619 + 9904405-9904586,9905315-9906764,9907320-9907509,990... 29 4.8
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 28 6.3
03_05_0518 + 25120610-25120733,25121434-25121978 28 6.3
12_02_0187 - 15063791-15063967,15064554-15064726,15065371-150654... 28 8.4
11_06_0179 + 20952070-20955228 28 8.4
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284... 28 8.4
>07_03_0922 -
22612773-22613321,22613616-22614189,22614389-22614466,
22615455-22615504,22616215-22616448
Length = 494
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 8 CRNRHEDSFSKPQNTVDSNIRTDAISKFKVQHGRSSFEVKSSSPEKS 148
C H +S S +NT D+N + A+SK + +SF ++S+ +KS
Sbjct: 142 CHTSHTESCSNNENTADNNSSSKALSKDR--SSAASFTEEASNSQKS 186
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 31.5 bits (68), Expect = 0.68
Identities = 27/93 (29%), Positives = 44/93 (47%)
Frame = +2
Query: 5 GCRNRHEDSFSKPQNTVDSNIRTDAISKFKVQHGRSSFEVKSSSPEKSNATYIRPSNSNT 184
G RNR++ + + + S I + H S+ V S+ +K N T I P+N NT
Sbjct: 105 GVRNRYKQTVKRGRK--GSQISPSKTYPLRSSH--SNVRVLRSASKKKNETPIVPTNDNT 160
Query: 185 SVFQKVNEKVDPSQNSRSLFSTTVNAEIKTKPK 283
+V Q+V +K S+ R S + + + K K
Sbjct: 161 AV-QRVAKKRKRSKPLRPAPSRVLRSTSEKKNK 192
>11_01_0017 -
129261-129335,129352-129426,129565-129645,129929-130040,
130131-131177,131256-131347,131773-131943,132150-132253,
132367-132501,132583-132724,132803-133059,133126-133337,
133417-133454
Length = 846
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +2
Query: 167 PSNSNTSVFQKVNEKVDPS----QNSRSLFSTTVNAEIKTKPKTLPASDNIFAKAMTNKT 334
P++S T+ Q++ +K +PS SRS S T + T+P T+ + + + ++
Sbjct: 218 PNSSGTAQIQRIPKKSEPSPSVVSRSRSTSSVTNVPKPTTRPATVTSERTHKVEGLPLES 277
Query: 335 KENIADSIFQNKNTSIGKDNIFTKNA 412
K S+ ++ +IGK+ + T A
Sbjct: 278 KTE-RSSVIKSSGPTIGKNMVPTVTA 302
>02_01_0325 - 2208480-2208674,2208772-2210609,2210980-2211109,
2211231-2211270,2211409-2211531,2211940-2212030,
2212396-2212480,2212565-2212720,2212797-2212853,
2212940-2213110,2213313-2213330,2213479-2213551,
2213754-2213839,2214348-2214466,2214542-2214641
Length = 1093
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +2
Query: 128 SSSPEKSNATYIRPSNSNTSVFQKVNEKVDPSQNSRSLFSTTVNAEIKTK--PKTLPASD 301
S+SP +N + S N E++ PS + L T+++A T K LP +
Sbjct: 791 STSPSTANGNHFTQSTKNRHCIN--TERLPPS-TAPMLIPTSIDAVTATPLMTKELPKPN 847
Query: 302 NIFAKAMTNKTKENIADSIFQNKNTSIGKDNIFTKNA 412
N +++ N N+A N ++ DN+ T ++
Sbjct: 848 NNVKQSVVNSKLPNVAPGPQNCINHALQTDNLETSSS 884
>02_03_0199 +
16263549-16263644,16264941-16265899,16267140-16267791,
16267895-16267981,16268253-16268381,16269990-16270036,
16271337-16271438,16272720-16272843,16272981-16273028,
16273934-16274026,16274325-16274408,16274536-16274619,
16274751-16274819,16275531-16275590,16275946-16276017,
16276957-16277064,16278162-16278238,16278391-16278474,
16278617-16278728,16278778-16278810,16278811-16278900,
16279012-16279077,16279163-16279258,16279446-16279497,
16279723-16279775,16279998-16280018
Length = 1165
Score = 30.3 bits (65), Expect = 1.6
Identities = 36/156 (23%), Positives = 61/156 (39%)
Frame = +2
Query: 128 SSSPEKSNATYIRPSNSNTSVFQKVNEKVDPSQNSRSLFSTTVNAEIKTKPKTLPASDNI 307
S+S + + I NS+TS + V+E S +S + T+ A K T S+
Sbjct: 161 STSTSNHSKSAIGTENSSTSRIKDVSEDKKVSIKKQSKSAKTIAA---AKIGTTDVSEE- 216
Query: 308 FAKAMTNKTKENIADSIFQNKNTSIGKDNIFTKNATHFTKFNENTAGNSIFAKPEKVDES 487
+ K I+ S KN +I +D + F+K ++ A + VD S
Sbjct: 217 -------ENKREISKS---EKNANISRDKKTSNRLKKFSKAKKSAAAKAEICTKSSVDSS 266
Query: 488 DARCQNIFGGFGKTDKSIFSKPHVLDGGSFNKLNGE 595
D+ + + + T KS+ V K G+
Sbjct: 267 DSEQKPLVPLYPPTAKSVIVVESVTKAKVIQKYLGD 302
>11_02_0123 -
8550193-8550213,8550434-8550682,8550787-8550834,
8550939-8551025,8551104-8551184,8551264-8551368,
8551464-8551556,8551635-8551715,8551794-8551895,
8552144-8552224,8552304-8552405,8552499-8552834,
8552920-8553006,8553275-8553493,8553575-8553769
Length = 628
Score = 29.5 bits (63), Expect = 2.7
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Frame = +2
Query: 5 GCRNRHEDSFSKPQNTVDSNIRTDAISKFKVQHGRSSFEVKSSSPEKSNATYIRPSNSNT 184
G +R++ + N DS+ +AI VQ +S V S+ P++S ++ P + T
Sbjct: 437 GQDSRNDITNGSVNNFEDSHTNRNAIQN-NVQRLQS---VSSTRPKESYSSQDLPYQNLT 492
Query: 185 SVFQKVNEKVDPSQNSRSLFSTTVNAEIKTKPKTLPASDNIFAKAMTNKT--KENIADSI 358
+ + V + S+S + + + K K +P K ++K+ +E S+
Sbjct: 493 TKQSIIQSSVKRPRTSQSCAESILPHD---KTKQVPQRKEAVLKHTSSKSGQREVYLFSL 549
Query: 359 FQ-NKNTSIGKDNIFTKNATHFTKFNENTAGNSIF 460
NK+ + K N+ T +ATH N GN +
Sbjct: 550 NAINKDKLVAKGNLVTTDATHVV--GRNMLGNEYY 582
>06_01_0801 -
5993726-5994160,5994811-5994969,5995071-5995211,
5995999-5996097,5996180-5996542,5996929-5997150,
5997257-5997448,5997997-5998056,5998162-5998378,
5998471-5998523,5999013-5999084,5999928-6000113,
6000986-6001132,6002902-6003075,6003149-6003300,
6004269-6004360,6004549-6004710,6004875-6005053,
6005173-6005304,6005454-6005507,6006082-6006191,
6006317-6006487,6006577-6006663,6008488-6008611,
6009355-6009564
Length = 1330
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 336 RRTLPTRYFKTKILVLEKIIYLRKMLLTSPNL--MKIQQVTVFLQSRRR*TSR 488
R+ P + T ++ KI+Y+R +L SP L +K+ V FL+ SR
Sbjct: 823 RKMEPRKVMDTMLVSRVKILYIRSLLARSPELQSIKVSPVERFLEKSHTSRSR 875
>03_02_0232 + 6614784-6614882,6616145-6616477,6616708-6616967,
6617328-6617469,6617567-6617938,6618056-6618187,
6618907-6619035,6619125-6621188
Length = 1176
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +2
Query: 26 DSFSKPQNTVDSNIRTDAISKFKVQHGRSSFEVKSSSPEKSNATYIRPSNSNTS 187
D S + D T +++ QH SS SPE+ N+ PS S
Sbjct: 876 DGLSSCTSEADRESSTSSVTSLSAQHQESSSSDSEESPERVNSIEEAPSTKTVS 929
>02_02_0156 -
7277793-7277875,7278535-7278638,7278808-7279211,
7279403-7279543,7279700-7279904,7279984-7280093
Length = 348
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +2
Query: 260 AEIKTKPKTLPASDNIFAKAMTNKTKENIADSIFQNKNTSIGKDNIFTKNATHFTKFNEN 439
A++ + + ASD I A + + N+AD + + + K+ + T+ K
Sbjct: 242 ADVDSDGRLSDASDGISMGAEADSSVSNVADQEQEKTSNTAAKERL-TRAVNRVQKLTLP 300
Query: 440 TAGNSIFAKPEKVDESDAR 496
AG S +P+ D + AR
Sbjct: 301 KAGQSSSLRPKPRDPAPAR 319
>01_03_0003 + 11509530-11512772
Length = 1080
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 15 IGTRILFRNRKTLSIQIFEQML*ANSKCNMEEVHSKSKAVRQRNQM 152
IG +FR R L+ F Q+L A CNM +H +S +R + M
Sbjct: 1021 IGITRVFRQRYKLNACQFSQVLYALFDCNMTRIHIRS--IRSNSDM 1064
>11_01_0450 -
3487464-3487844,3487883-3488268,3488883-3489033,
3489132-3491102,3492090-3492149,3492240-3492436,
3492678-3492963
Length = 1143
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 320 MTNKTKENIADSIFQNKNTSIGKDNIFTKNATHFTKFNENTAGNSIFAKPEKVDESDARC 499
+ N ++I+D N N G + + N NEN A + IF PE +
Sbjct: 455 LENPFMQDISDEN-TNSNKDTGHEGLTLLNLDATLTSNENFAQSKIFVAPEDSESEGTIS 513
Query: 500 QNIF 511
+N+F
Sbjct: 514 ENLF 517
>03_06_0769 + 36134298-36134356,36134740-36134919,36134975-36135007,
36135008-36135128,36135227-36135266,36135811-36135863,
36135937-36135998,36136354-36136506,36136949-36137160,
36137480-36138972,36140560-36141483,36141734-36142043,
36143818-36143874,36144114-36144167,36144452-36144510
Length = 1269
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +2
Query: 47 NTVDSNIRTDAISKFKVQHGR---SSFEVKSSSPEKSNATYIRPSNSNTSVFQKVNEKVD 217
N V + + A K K ++GR SS +K + KSNA RPSNS + K
Sbjct: 894 NAVSKSTSSLAAMK-KEKNGRNELSSERLKKLAEPKSNALTDRPSNSKFASMDHSRRKSM 952
Query: 218 PSQNSRSLFSTTVNAEIKTKPKTLP 292
P S + + + K TLP
Sbjct: 953 PEDTQTKKISAIMQLD-QRKSATLP 976
>03_02_0619 +
9904405-9904586,9905315-9906764,9907320-9907509,
9909578-9910164
Length = 802
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 125 KSSSPEKSNATYIRPSNSNTSVFQKVNEKV 214
+S+SP N + R S N S F +NEK+
Sbjct: 488 RSASPSHDNRNHSRCSTDNFSTFDCINEKI 517
>09_06_0317 - 22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 377 SIGKDNIFTKNATHF-TKFNENTAGNSIFAKPEKVDESDARCQNIFGGFG 523
SI KDN K+A +F + E ++G+S +K E+V ARC +I G
Sbjct: 993 SIEKDNWMYKDAVYFDSSKTEGSSGDSAESK-ERVPIVHARCMSISSNDG 1041
>03_05_0518 + 25120610-25120733,25121434-25121978
Length = 222
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/83 (19%), Positives = 36/83 (43%)
Frame = +2
Query: 347 ADSIFQNKNTSIGKDNIFTKNATHFTKFNENTAGNSIFAKPEKVDESDARCQNIFGGFGK 526
A+ +F + S G+ +F + HF + + NT+ +I A ++ + + +FG
Sbjct: 136 ANKLF-TRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPP 194
Query: 527 TDKSIFSKPHVLDGGSFNKLNGE 595
++ +DGG + +
Sbjct: 195 LPSDTLARAFQVDGGMVESIKSK 217
>12_02_0187 -
15063791-15063967,15064554-15064726,15065371-15065497,
15065794-15065817
Length = 166
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 5 GCRNRHEDSFSKPQNTVDSNIRTD 76
GCR R +DS+ K + S+ RTD
Sbjct: 2 GCRGRQQDSYDKGRTKGGSSTRTD 25
>11_06_0179 + 20952070-20955228
Length = 1052
Score = 27.9 bits (59), Expect = 8.4
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 4/133 (3%)
Frame = +2
Query: 173 NSNTSVFQKVNEKVDPSQNSRSLFSTTVNAEIKTKPKTLPASDNIFAKAMTNKTKENIAD 352
+S+ SV +K N+ + N R + T N + K A N+F + K +
Sbjct: 351 DSSASVEKKANQSM---MNQRKSSAQTANENASGRFKPDHADPNVFDR------KNFGTE 401
Query: 353 SIFQNKNTSIGKDNIFTKNATHFTKFNENTAGNSIFAKPEK----VDESDARCQNIFGGF 520
F N+++ ++A +N + NS K +K + + D CQ IF
Sbjct: 402 DSFPVPNSAVPSS--LRRSARRKQDAGDNGSMNSKVRKKQKKNNVLSDVDLNCQQIFNNN 459
Query: 521 GKTDKSIFSKPHV 559
G + + PHV
Sbjct: 460 GTSGDKQSAPPHV 472
>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
27829243-27829449,27829611-27829704,27829806-27829870,
27829946-27830398,27830467-27830760,27830837-27831295,
27831367-27831588,27831755-27831968,27832039-27832494,
27833280-27833389,27833468-27833644,27833758-27833979,
27834048-27834167,27834274-27834383,27834552-27834607,
27835252-27835440,27835602-27835775,27836066-27836281,
27837066-27837106,27837971-27837986,27838330-27838415,
27838737-27838910,27839093-27839149,27839720-27840064,
27840175-27840216,27840377-27840496,27840575-27840724,
27840830-27841534,27841609-27841954,27842978-27843080,
27844817-27844860,27845905-27846101,27846322-27846344,
27846802-27847122,27847406-27847579,27847843-27848047,
27848817-27848880,27850097-27850278,27850291-27850350,
27850688-27850748,27851249-27851313,27851491-27851569,
27851656-27852021,27852442-27852790,27852887-27852989,
27853103-27853373,27854296-27854405,27854515-27854652
Length = 3364
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 401 TKNATHFT-KFN-ENTAGNSIFAKPEKVDESDARCQNIFGGFGKTD 532
T+ HF+ +F E T G+S+F+K +++++SD C++ G + D
Sbjct: 2597 TRTVLHFSFEFLVEGTGGSSVFSKFKEIEDSD--CKSDLGSVERLD 2640
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,351,952
Number of Sequences: 37544
Number of extensions: 370351
Number of successful extensions: 983
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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