Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1025
(706 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064608-1|AAH64608.1| 311|Homo sapiens mediator complex subuni... 150 4e-36
AL713892-2|CAI17283.2| 311|Homo sapiens cofactor required for S... 150 4e-36
AL603649-2|CAH72529.2| 311|Homo sapiens cofactor required for S... 150 4e-36
AL513102-2|CAH72546.2| 311|Homo sapiens cofactor required for S... 150 4e-36
AL160271-7|CAI13386.2| 311|Homo sapiens cofactor required for S... 150 4e-36
AF104252-1|AAD12721.1| 273|Homo sapiens transcriptional co-acti... 128 2e-29
AF230382-1|AAF37290.1| 273|Homo sapiens p37 TRAP/SMCC/PC2 subun... 125 2e-28
AL713892-1|CAI17284.1| 237|Homo sapiens cofactor required for S... 84 6e-21
AL603649-1|CAH72530.1| 237|Homo sapiens cofactor required for S... 84 6e-21
AL513102-1|CAH72547.1| 237|Homo sapiens cofactor required for S... 84 6e-21
AL160271-6|CAI13387.1| 237|Homo sapiens cofactor required for S... 84 6e-21
DQ099387-1|AAZ13763.1| 237|Homo sapiens cofactor required for S... 83 1e-20
BC119723-1|AAI19724.1| 168|Homo sapiens LOC441089 protein protein. 85 3e-16
BC119722-1|AAI19723.1| 168|Homo sapiens LOC441089 protein protein. 85 3e-16
>BC064608-1|AAH64608.1| 311|Homo sapiens mediator complex subunit
27 protein.
Length = 311
Score = 150 bits (364), Expect = 4e-36
Identities = 88/236 (37%), Positives = 139/236 (58%), Gaps = 10/236 (4%)
Frame = +1
Query: 22 LNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLEQTVSGL 198
+++++ LRSSVS VF+ L +G+R +G+EK F +LE+ + +
Sbjct: 18 ISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELERLSNLV 77
Query: 199 PIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKRSY 378
P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKRS
Sbjct: 78 GKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKRSA 137
Query: 379 INSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINLSHV 552
G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ + L V
Sbjct: 138 NQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLVTLGKV 197
Query: 553 LKAVVAFKGLLMEWVMVKGYGET-------LDLWTESRHHVFRKVTENAHAAMLHF 699
LK +V + L ++ +VKGY E LD+W++S + VF+KVT++A A+LH+
Sbjct: 198 LKVIVVMRSLFIDRTIVKGYNENVYTEDGKLDIWSKSNYQVFQKVTDHATTALLHY 253
>AL713892-2|CAI17283.2| 311|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 311
Score = 150 bits (364), Expect = 4e-36
Identities = 88/236 (37%), Positives = 139/236 (58%), Gaps = 10/236 (4%)
Frame = +1
Query: 22 LNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLEQTVSGL 198
+++++ LRSSVS VF+ L +G+R +G+EK F +LE+ + +
Sbjct: 18 ISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELERLSNLV 77
Query: 199 PIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKRSY 378
P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKRS
Sbjct: 78 GKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKRSA 137
Query: 379 INSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINLSHV 552
G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ + L V
Sbjct: 138 NQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLVTLGKV 197
Query: 553 LKAVVAFKGLLMEWVMVKGYGET-------LDLWTESRHHVFRKVTENAHAAMLHF 699
LK +V + L ++ +VKGY E LD+W++S + VF+KVT++A A+LH+
Sbjct: 198 LKVIVVMRSLFIDRTIVKGYNENVYTEDGKLDIWSKSNYQVFQKVTDHATTALLHY 253
>AL603649-2|CAH72529.2| 311|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 311
Score = 150 bits (364), Expect = 4e-36
Identities = 88/236 (37%), Positives = 139/236 (58%), Gaps = 10/236 (4%)
Frame = +1
Query: 22 LNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLEQTVSGL 198
+++++ LRSSVS VF+ L +G+R +G+EK F +LE+ + +
Sbjct: 18 ISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELERLSNLV 77
Query: 199 PIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKRSY 378
P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKRS
Sbjct: 78 GKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKRSA 137
Query: 379 INSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINLSHV 552
G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ + L V
Sbjct: 138 NQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLVTLGKV 197
Query: 553 LKAVVAFKGLLMEWVMVKGYGET-------LDLWTESRHHVFRKVTENAHAAMLHF 699
LK +V + L ++ +VKGY E LD+W++S + VF+KVT++A A+LH+
Sbjct: 198 LKVIVVMRSLFIDRTIVKGYNENVYTEDGKLDIWSKSNYQVFQKVTDHATTALLHY 253
>AL513102-2|CAH72546.2| 311|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 311
Score = 150 bits (364), Expect = 4e-36
Identities = 88/236 (37%), Positives = 139/236 (58%), Gaps = 10/236 (4%)
Frame = +1
Query: 22 LNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLEQTVSGL 198
+++++ LRSSVS VF+ L +G+R +G+EK F +LE+ + +
Sbjct: 18 ISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELERLSNLV 77
Query: 199 PIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKRSY 378
P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKRS
Sbjct: 78 GKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKRSA 137
Query: 379 INSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINLSHV 552
G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ + L V
Sbjct: 138 NQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLVTLGKV 197
Query: 553 LKAVVAFKGLLMEWVMVKGYGET-------LDLWTESRHHVFRKVTENAHAAMLHF 699
LK +V + L ++ +VKGY E LD+W++S + VF+KVT++A A+LH+
Sbjct: 198 LKVIVVMRSLFIDRTIVKGYNENVYTEDGKLDIWSKSNYQVFQKVTDHATTALLHY 253
>AL160271-7|CAI13386.2| 311|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 311
Score = 150 bits (364), Expect = 4e-36
Identities = 88/236 (37%), Positives = 139/236 (58%), Gaps = 10/236 (4%)
Frame = +1
Query: 22 LNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLEQTVSGL 198
+++++ LRSSVS VF+ L +G+R +G+EK F +LE+ + +
Sbjct: 18 ISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELERLSNLV 77
Query: 199 PIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKRSY 378
P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKRS
Sbjct: 78 GKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKRSA 137
Query: 379 INSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINLSHV 552
G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ + L V
Sbjct: 138 NQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLVTLGKV 197
Query: 553 LKAVVAFKGLLMEWVMVKGYGET-------LDLWTESRHHVFRKVTENAHAAMLHF 699
LK +V + L ++ +VKGY E LD+W++S + VF+KVT++A A+LH+
Sbjct: 198 LKVIVVMRSLFIDRTIVKGYNENVYTEDGKLDIWSKSNYQVFQKVTDHATTALLHY 253
>AF104252-1|AAD12721.1| 273|Homo sapiens transcriptional
co-activator CRSP34 protein.
Length = 273
Score = 128 bits (309), Expect = 2e-29
Identities = 72/178 (40%), Positives = 109/178 (61%), Gaps = 9/178 (5%)
Frame = +1
Query: 193 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 372
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSSDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 373 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINLS 546
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ + L
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLVTLG 157
Query: 547 HVLKAVVAFKGLLMEWVMVKGYGET-------LDLWTESRHHVFRKVTENAHAAMLHF 699
VLK +V + ++ +VKGY E LD+W++S + VF+KVT++A A+LH+
Sbjct: 158 KVLKVIVVMRSCFIDRTIVKGYNENVYTEDGKLDIWSKSNYQVFQKVTDHATTALLHY 215
>AF230382-1|AAF37290.1| 273|Homo sapiens p37 TRAP/SMCC/PC2 subunit
protein.
Length = 273
Score = 125 bits (301), Expect = 2e-28
Identities = 71/178 (39%), Positives = 108/178 (60%), Gaps = 9/178 (5%)
Frame = +1
Query: 193 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 372
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 373 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINLS 546
S G S KR K Q V P Q VD+VI+ IDR + +M I +SRP ++ ++ + L
Sbjct: 98 SANQMGVSAKRXPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSXMLLVTLG 157
Query: 547 HVLKAVVAFKGLLMEWVMVKGYGET-------LDLWTESRHHVFRKVTENAHAAMLHF 699
VLK +V + L ++ +VKGY E LD+W++S + VF+KVT++A A+LH+
Sbjct: 158 KVLKVIVVMRSLFIDRTIVKGYNENVYTEDGKLDIWSKSNYQVFQKVTDHATTALLHY 215
>AL713892-1|CAI17284.1| 237|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 237
Score = 83.8 bits (198), Expect(2) = 6e-21
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +1
Query: 193 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 372
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 373 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINL 543
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ +++
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLLDI 156
Score = 37.1 bits (82), Expect(2) = 6e-21
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +1
Query: 622 LDLWTESRHHVFRKVTENAHAAMLHF 699
LD+W++S + VF+KVT++A A+LH+
Sbjct: 154 LDIWSKSNYQVFQKVTDHATTALLHY 179
>AL603649-1|CAH72530.1| 237|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 237
Score = 83.8 bits (198), Expect(2) = 6e-21
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +1
Query: 193 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 372
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 373 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINL 543
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ +++
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLLDI 156
Score = 37.1 bits (82), Expect(2) = 6e-21
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +1
Query: 622 LDLWTESRHHVFRKVTENAHAAMLHF 699
LD+W++S + VF+KVT++A A+LH+
Sbjct: 154 LDIWSKSNYQVFQKVTDHATTALLHY 179
>AL513102-1|CAH72547.1| 237|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 237
Score = 83.8 bits (198), Expect(2) = 6e-21
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +1
Query: 193 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 372
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 373 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINL 543
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ +++
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLLDI 156
Score = 37.1 bits (82), Expect(2) = 6e-21
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +1
Query: 622 LDLWTESRHHVFRKVTENAHAAMLHF 699
LD+W++S + VF+KVT++A A+LH+
Sbjct: 154 LDIWSKSNYQVFQKVTDHATTALLHY 179
>AL160271-6|CAI13387.1| 237|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 8, 34kDa protein.
Length = 237
Score = 83.8 bits (198), Expect(2) = 6e-21
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +1
Query: 193 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 372
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GKPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 373 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINL 543
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ +++
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLLDI 156
Score = 37.1 bits (82), Expect(2) = 6e-21
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +1
Query: 622 LDLWTESRHHVFRKVTENAHAAMLHF 699
LD+W++S + VF+KVT++A A+LH+
Sbjct: 154 LDIWSKSNYQVFQKVTDHATTALLHY 179
>DQ099387-1|AAZ13763.1| 237|Homo sapiens cofactor required for Sp1
transcriptional activation subunit 8 34kDa protein.
Length = 237
Score = 83.4 bits (197), Expect(2) = 1e-20
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +1
Query: 193 GLPIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKR 372
G P PL+ N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKR
Sbjct: 40 GEPSENHPLH--NSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKR 97
Query: 373 SYINSG-STKRRGKLQSNHNVAPIQ-VDNVINNIDRSYNDMKITISRPFASNAVVQINL 543
S G S KRR K Q V P Q VD+VI+ IDR + +M I +SRP ++A++ +++
Sbjct: 98 SANQMGVSAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEMSIHLSRPNGTSAMLLLDI 156
Score = 36.3 bits (80), Expect(2) = 1e-20
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +1
Query: 622 LDLWTESRHHVFRKVTENAHAAMLHF 699
LD+W++S + VF+KVT++A A+LH+
Sbjct: 154 LDIWSKSDYQVFQKVTDHATTALLHY 179
>BC119723-1|AAI19724.1| 168|Homo sapiens LOC441089 protein protein.
Length = 168
Score = 84.6 bits (200), Expect = 3e-16
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 22 LNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLEQTVSGL 198
+++++ LRSSVS VF+ L +G+R +G+EK F +LE+ + +
Sbjct: 18 ISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELERLSNLV 77
Query: 199 PIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKRSY 378
P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKRS
Sbjct: 78 GKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKRSA 137
Query: 379 INSG-STKRRGKLQSNHNVAPIQ-VDNVIN 462
G S KRR K Q V P Q VD+VI+
Sbjct: 138 NQMGVSAKRRPKAQPTTLVLPPQYVDDVIS 167
>BC119722-1|AAI19723.1| 168|Homo sapiens LOC441089 protein protein.
Length = 168
Score = 84.6 bits (200), Expect = 3e-16
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 22 LNSLRTLRSSVSHVFETLSNGLRADHGEDGKEK-FXXXXXXXXXXXXXXXRDLEQTVSGL 198
+++++ LRSSVS VF+ L +G+R +G+EK F +LE+ + +
Sbjct: 18 ISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNELERLSNLV 77
Query: 199 PIPTAPLNLGNTTYLSQETSQDRQTLYTQLVNSYKWTDKIHEYSSFAHTLLSQNSLKRSY 378
P+ L N+ LS + QD+ LY+QL+ +YKW++K+ ++ A LL+Q SLKRS
Sbjct: 78 GKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKRSA 137
Query: 379 INSG-STKRRGKLQSNHNVAPIQ-VDNVIN 462
G S KRR K Q V P Q VD+VI+
Sbjct: 138 NQMGVSAKRRPKAQPTTLVLPPQYVDDVIS 167
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.129 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,791,715
Number of Sequences: 237096
Number of extensions: 1746653
Number of successful extensions: 3221
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3196
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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