Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1021
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   5.0  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   5.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.0  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   5.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   6.6  
X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.           21   8.7  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   8.7  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   8.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.7  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +2

Query: 479 RYLALYHPV 505
           RYLA+YHP+
Sbjct: 132 RYLAIYHPL 140


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
 Frame = +3

Query: 240 VVFNSKYSDSQLFRAIADSIVHASIGFLSSLI-YFTYNHNTSVPIHINVFICTFVSSFID 416
           +VFN       LF  +   I    I FLS L+ Y   +    V + I++ +   V  F+ 
Sbjct: 226 IVFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTV-FFLL 284

Query: 417 VDHFIAAKSIYLKDALNLNRRGTLHCTTLWILITLPML 530
           +   I   S+ +   L      T+   TL +++T+ +L
Sbjct: 285 LAEIIPPTSLTV-PLLGKYLLFTMVLVTLSVVVTIAVL 321


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 447 YLKDALNLNRRGTLHCTT 500
           Y     NLN  GT++CT+
Sbjct: 143 YYDGGANLNLNGTVNCTS 160


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 3/21 (14%)
 Frame = +1

Query: 586 YW---HTHHITFETAADDAYG 639
           YW   H H +   TA  DAYG
Sbjct: 105 YWVERHKHIVRLVTAIGDAYG 125


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 437 QINLLKGCSELEPPRYLALYHPVDTDYTTHASVQHHNETS 556
           QI LLK CS       +A  + V TD    A+ Q + + S
Sbjct: 407 QIALLKACSSEVMMLRMARKYDVQTDSIIFANNQPYTKDS 446


>X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.
          Length = 103

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 581 VNTGILITSHSRRQQTTPMDV 643
           +   +  T H++R+  T MDV
Sbjct: 67  IRDAVTYTEHTKRKTVTAMDV 87


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 9/39 (23%)
 Frame = -1

Query: 696 WLKINIPFCSKVPC---------DLTDTSIGVVCCRLEC 607
           +L+ + PFC K P             DTSIGV  C L C
Sbjct: 79  YLEPSPPFCEKNPKLGILGTHGRQCNDTSIGVDGCDLMC 117


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 9/39 (23%)
 Frame = -1

Query: 696 WLKINIPFCSKVPC---------DLTDTSIGVVCCRLEC 607
           +L+ + PFC K P             DTSIGV  C L C
Sbjct: 80  YLEPSPPFCEKNPKLGILGTHGRQCNDTSIGVDGCDLMC 118


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 334 INDDRNPIDACTMLSAIA 281
           + +  NPID C M  +++
Sbjct: 407 LRNGENPIDTCEMFDSVS 424


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,921
Number of Sequences: 438
Number of extensions: 3664
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)