Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1003
         (605 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC103890-1|AAI03891.1|  395|Homo sapiens NHL repeat containing 1...    30   7.3  
BC103889-1|AAI03890.1|  395|Homo sapiens NHL repeat containing 1...    30   7.3  
BC103888-1|AAI03889.1|  395|Homo sapiens NHL repeat containing 1...    30   7.3  
AY324850-1|AAQ19671.1|  395|Homo sapiens malin protein.                30   7.3  
AL589723-1|CAH71232.1|  395|Homo sapiens protein ( Human DNA seq...    30   7.3  
BC008947-1|AAH08947.1|  464|Homo sapiens centrosomal protein 55k...    29   9.6  
AL356214-1|CAH72324.1|  464|Homo sapiens centrosomal protein 55k...    29   9.6  
AK223495-1|BAD97215.1|  464|Homo sapiens chromosome 10 open read...    29   9.6  
AB091343-1|BAE45243.1|  464|Homo sapiens up-regulated in colon c...    29   9.6  

>BC103890-1|AAI03891.1|  395|Homo sapiens NHL repeat containing 1
           protein.
          Length = 395

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -1

Query: 248 RLCQGCDTSVCLHVLEL 198
           R C+GCDTS CL VL L
Sbjct: 73  RACRGCDTSDCLPVLHL 89


>BC103889-1|AAI03890.1|  395|Homo sapiens NHL repeat containing 1
           protein.
          Length = 395

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -1

Query: 248 RLCQGCDTSVCLHVLEL 198
           R C+GCDTS CL VL L
Sbjct: 73  RACRGCDTSDCLPVLHL 89


>BC103888-1|AAI03889.1|  395|Homo sapiens NHL repeat containing 1
           protein.
          Length = 395

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -1

Query: 248 RLCQGCDTSVCLHVLEL 198
           R C+GCDTS CL VL L
Sbjct: 73  RACRGCDTSDCLPVLHL 89


>AY324850-1|AAQ19671.1|  395|Homo sapiens malin protein.
          Length = 395

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -1

Query: 248 RLCQGCDTSVCLHVLEL 198
           R C+GCDTS CL VL L
Sbjct: 73  RACRGCDTSDCLPVLHL 89


>AL589723-1|CAH71232.1|  395|Homo sapiens protein ( Human DNA
           sequence from clone RP11-204B7 on chromosome 6 Contains 
           the TPMT gene for thiopurine S-methyltransferase, the
           gene for a  ).
          Length = 395

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -1

Query: 248 RLCQGCDTSVCLHVLEL 198
           R C+GCDTS CL VL L
Sbjct: 73  RACRGCDTSDCLPVLHL 89


>BC008947-1|AAH08947.1|  464|Homo sapiens centrosomal protein 55kDa
           protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = +3

Query: 33  NEVERQRAKAEIDVIGEKVGEWGIGEGEWTDEQRHR-----KPTEFEKENPNILMLNRDG 197
           +E   ++ K EI  +   V E   G+G+ TD++RHR     +  E EKE     +  +D 
Sbjct: 23  SETTLEKLKGEIAHLKTSVDEITSGKGKLTDKERHRLLEKIRVLEAEKEKNAYQLTEKDK 82

Query: 198 QFENM 212
           + + +
Sbjct: 83  EIQRL 87


>AL356214-1|CAH72324.1|  464|Homo sapiens centrosomal protein 55kDa
           protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = +3

Query: 33  NEVERQRAKAEIDVIGEKVGEWGIGEGEWTDEQRHR-----KPTEFEKENPNILMLNRDG 197
           +E   ++ K EI  +   V E   G+G+ TD++RHR     +  E EKE     +  +D 
Sbjct: 23  SETTLEKLKGEIAHLKTSVDEITSGKGKLTDKERHRLLEKIRVLEAEKEKNAYQLTEKDK 82

Query: 198 QFENM 212
           + + +
Sbjct: 83  EIQRL 87


>AK223495-1|BAD97215.1|  464|Homo sapiens chromosome 10 open reading
           frame 3 variant protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = +3

Query: 33  NEVERQRAKAEIDVIGEKVGEWGIGEGEWTDEQRHR-----KPTEFEKENPNILMLNRDG 197
           +E   ++ K EI  +   V E   G+G+ TD++RHR     +  E EKE     +  +D 
Sbjct: 23  SETTLEKLKGEIAHLKTSVDEITSGKGKLTDKERHRLLEKIRVLEAEKEKNAYQLTEKDK 82

Query: 198 QFENM 212
           + + +
Sbjct: 83  EIQRL 87


>AB091343-1|BAE45243.1|  464|Homo sapiens up-regulated in colon
           cancer 6 protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = +3

Query: 33  NEVERQRAKAEIDVIGEKVGEWGIGEGEWTDEQRHR-----KPTEFEKENPNILMLNRDG 197
           +E   ++ K EI  +   V E   G+G+ TD++RHR     +  E EKE     +  +D 
Sbjct: 23  SETTLEKLKGEIAHLKTSVDEITSGKGKLTDKERHRLLEKIRVLEAEKEKNAYQLTEKDK 82

Query: 198 QFENM 212
           + + +
Sbjct: 83  EIQRL 87


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,305,007
Number of Sequences: 237096
Number of extensions: 1285857
Number of successful extensions: 2373
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2373
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)