Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0988
(705 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 77 6e-14
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 77 6e-14
BC150270-1|AAI50271.1| 1781|Homo sapiens MYST4 protein protein. 31 5.3
AF217500-1|AAL56647.1| 2072|Homo sapiens histone acetyltransfera... 31 5.3
AF119231-1|AAF00100.1| 2073|Homo sapiens histone acetyltransfera... 31 5.3
AF119230-1|AAF00099.1| 1890|Homo sapiens histone acetyltransfera... 31 5.3
AF113514-1|AAF00095.1| 1781|Homo sapiens histone acetyltransfera... 31 5.3
AB002381-1|BAA20837.2| 1781|Homo sapiens KIAA0383 protein. 31 5.3
BC130002-1|AAI30003.1| 267|Homo sapiens LOC390748 protein protein. 30 9.3
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 77.0 bits (181), Expect = 6e-14
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = +2
Query: 476 IKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEAD 622
IKARVREMEEEAEKLK++Q EV+KQM+M PPG P+ MSIEEK+EAD
Sbjct: 122 IKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEAD 170
Score = 49.2 bits (112), Expect = 1e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +3
Query: 621 TILWNKYDGHPKGFAYIEFGDKDSVQTA 704
TIL +K+ GHPKGFAYIEF DK+SV+T+
Sbjct: 202 TILCDKFSGHPKGFAYIEFSDKESVRTS 229
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 77.0 bits (181), Expect = 6e-14
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = +2
Query: 476 IKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEAD 622
IKARVREMEEEAEKLK++Q EV+KQM+M PPG P+ MSIEEK+EAD
Sbjct: 122 IKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEAD 170
Score = 49.2 bits (112), Expect = 1e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +3
Query: 621 TILWNKYDGHPKGFAYIEFGDKDSVQTA 704
TIL +K+ GHPKGFAYIEF DK+SV+T+
Sbjct: 202 TILCDKFSGHPKGFAYIEFSDKESVRTS 229
>BC150270-1|AAI50271.1| 1781|Homo sapiens MYST4 protein protein.
Length = 1781
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 494 EMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEK 610
E EE+ E+ ++ + E +++ SPP LT P +++I+ K
Sbjct: 794 EEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRK 832
>AF217500-1|AAL56647.1| 2072|Homo sapiens histone acetyltransferase
MOZ2 protein.
Length = 2072
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 494 EMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEK 610
E EE+ E+ ++ + E +++ SPP LT P +++I+ K
Sbjct: 1085 EEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRK 1123
>AF119231-1|AAF00100.1| 2073|Homo sapiens histone acetyltransferase
MORF beta protein.
Length = 2073
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 494 EMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEK 610
E EE+ E+ ++ + E +++ SPP LT P +++I+ K
Sbjct: 1086 EEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRK 1124
>AF119230-1|AAF00099.1| 1890|Homo sapiens histone acetyltransferase
MORF alpha protein.
Length = 1890
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 494 EMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEK 610
E EE+ E+ ++ + E +++ SPP LT P +++I+ K
Sbjct: 903 EEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRK 941
>AF113514-1|AAF00095.1| 1781|Homo sapiens histone acetyltransferase
MORF protein.
Length = 1781
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 494 EMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEK 610
E EE+ E+ ++ + E +++ SPP LT P +++I+ K
Sbjct: 794 EEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRK 832
>AB002381-1|BAA20837.2| 1781|Homo sapiens KIAA0383 protein.
Length = 1781
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 494 EMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEK 610
E EE+ E+ ++ + E +++ SPP LT P +++I+ K
Sbjct: 794 EEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRK 832
>BC130002-1|AAI30003.1| 267|Homo sapiens LOC390748 protein protein.
Length = 267
Score = 29.9 bits (64), Expect = 9.3
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 524 QMQTEVDKQMSMG---SPPGLTSPLNMSIEEKIEADNIME*V*WPPKRFCLHRIWRQG 688
Q Q E ++ + G SP + PL+ + EEK+EAD+ V CLHR+ QG
Sbjct: 110 QQQAEEEEGTAAGQLLSPETVGCPLSGTPEEKVEADHRSVYV----GNLCLHRVCHQG 163
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,622,084
Number of Sequences: 237096
Number of extensions: 1591827
Number of successful extensions: 3559
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3559
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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