Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0987
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122102-1|AAM52614.1| 1068|Drosophila melanogaster GH09711p pro...    28   9.6  
AE014297-262|AAF52018.2|  995|Drosophila melanogaster CG31547-PA...    28   9.6  
AE014297-261|AAF52017.2| 1068|Drosophila melanogaster CG31547-PB...    28   9.6  
AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-P...    28   9.6  

>AY122102-1|AAM52614.1| 1068|Drosophila melanogaster GH09711p
           protein.
          Length = 1068

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +2

Query: 485 NNVMSISSRTGFMP*NTNIINIRFLSDWCKC---QVESYHS 598
           + + +++  TGF   + NI+ + +  DW +C   +VESY S
Sbjct: 713 DGINALTKSTGFGKMSPNIVLVGYKPDWNRCRKEEVESYFS 753


>AE014297-262|AAF52018.2|  995|Drosophila melanogaster CG31547-PA,
           isoform A protein.
          Length = 995

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +2

Query: 485 NNVMSISSRTGFMP*NTNIINIRFLSDWCKC---QVESYHS 598
           + + +++  TGF   + NI+ + +  DW +C   +VESY S
Sbjct: 640 DGINALTKSTGFGKMSPNIVLVGYKPDWNRCRKEEVESYFS 680


>AE014297-261|AAF52017.2| 1068|Drosophila melanogaster CG31547-PB,
           isoform B protein.
          Length = 1068

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +2

Query: 485 NNVMSISSRTGFMP*NTNIINIRFLSDWCKC---QVESYHS 598
           + + +++  TGF   + NI+ + +  DW +C   +VESY S
Sbjct: 713 DGINALTKSTGFGKMSPNIVLVGYKPDWNRCRKEEVESYFS 753


>AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-PA
           protein.
          Length = 3781

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
 Frame = -2

Query: 454 RDFNHLILWCDNCR--AQNKNWILFTSL-VTIIISGFFNLKSWTL*YLPN*RSHKHVADG 284
           +D   LI WC N R   Q K    F S        G F LK W +  L     H     G
Sbjct: 688 KDIKSLIKWCQNARLPVQAKEPRHFCSRHFEERCIGKFRLKPWAVPTL-----HLGAQYG 742

Query: 283 -VHGNMER-QIKNKRCCVRF*R 224
            +H N +   ++ KRCC+ F R
Sbjct: 743 KIHDNPKNLYVEEKRCCLNFCR 764


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,598,370
Number of Sequences: 53049
Number of extensions: 560848
Number of successful extensions: 1503
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)