Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0974
(733 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC691.05c ||SPBP22H7.01c|membrane transporter |Schizosaccharom... 48 1e-06
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 33 0.056
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo... 29 0.52
SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 29 0.90
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 27 3.6
SPAPB2B4.05 |vma5||V-type ATPase subunit C|Schizosaccharomyces p... 27 3.6
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 26 4.8
SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 26 4.8
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 26 4.8
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 26 6.4
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 8.4
>SPBC691.05c ||SPBP22H7.01c|membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 668
Score = 48.0 bits (109), Expect = 1e-06
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 4/206 (1%)
Frame = +2
Query: 71 YLFDNSTTVFFAIFMSFWAACFLELWKRYSAEMTHRWDLTGFDVYEEHPRPQYLAR-LAH 247
Y F + FAI ++ W A F++ W+ ++T+ W Q LA+ +
Sbjct: 203 YYFLRPYSYIFAIGVALWGAFFIQFWRVQEHKLTNHWSTVNC---------QSLAKSMTE 253
Query: 248 VKRRQLNV--VTGENEPMVPFWRMRLPATLMSFSXXXXXXXXXXXXXXXXXXYRMSLLGA 421
K + V + G P P W + + +T+ + ++L +
Sbjct: 254 FKPQSYRVDSLLGTARPYYPQWEIIVRSTIANVPLFLISGCILLFLIAIAFIVDVTL--S 311
Query: 422 AVLRHNDNVLITYSP-IMFTTATAACINLCFIFLFNYIYQYLAEWLTEKELLRTQTEFDD 598
V +++ P ++F T F +IY +AE LT+ E RT+T+F
Sbjct: 312 EVYSGPLKSIVSLLPAVVFQVLTLP---------FTFIYSIVAERLTKLENRRTKTDFQA 362
Query: 599 SLTLKIYLLQFVNYYASIFYIAFFKG 676
SL+ K++L F+ Y ++F I++ G
Sbjct: 363 SLSGKMFLQNFMLSYTALFLISYIYG 388
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 32.7 bits (71), Expect = 0.056
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 104 AIFMSFWAACFLELWKRYSAEMTHRWDLTG 193
AIF S W C E+WKR+ ++ H D G
Sbjct: 1282 AIFYSVWNQCIAEVWKRFPLDIYHVNDYHG 1311
>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
Pik3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 801
Score = 29.5 bits (63), Expect = 0.52
Identities = 12/44 (27%), Positives = 29/44 (65%)
Frame = -1
Query: 259 SSLDVREARQVLRARVLLVHVEPGEVPAVRHLGRVALPKLQEAR 128
+SL++ + +++ R LL+ ++ G+VP+V L ++ K+++ R
Sbjct: 145 TSLELEQVKEINRLDGLLLKLQLGDVPSVNWLDDISFGKIKDFR 188
>SPAC1A6.09c |lag1||sphingosine N-acyltransferase
Lag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 28.7 bits (61), Expect = 0.90
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 503 LCFIFLFNYIYQYLAEWLTEKELLRTQTEFDDSLTLKIYLL 625
LCF FL YIY+ W E++L ++ S K Y L
Sbjct: 166 LCFWFLGLYIYRSSNYWSNEEKLFEDYPQYYMSPLFKAYYL 206
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +2
Query: 2 WIPGLQEFGTRGIEGDCLQSRITYLFDNSTTVFF--AIFMSFWA 127
W P F +E C+Q++ TY N+ F +F WA
Sbjct: 1069 WNPLADSFSASNVEMQCVQAKFTYNDSNAYEKVFKPMLFHECWA 1112
>SPAPB2B4.05 |vma5||V-type ATPase subunit C|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 542 LAEWLTEKELLRT-QTEFDDSLTLKIYLLQFVNYYASIFYIAFFKGKI 682
+ E+ E+ L T Q+EFDD+ + +L + YASI + F+G I
Sbjct: 253 IREFTFEQGLRETEQSEFDDAAVKEKRMLSSLLRYASIAFSESFQGWI 300
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 721 VPEESNILSGSTDDFPFEESDVEYRGVVVHELEQVYLESERVVELGLR 578
VP SN+L T D + +D + + ++E+E +LE V+ GL+
Sbjct: 816 VPFRSNVLLQPTTDCLVQLTDTPFTVITLNEIEIAHLER---VQFGLK 860
>SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1028
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = +2
Query: 182 DLTGFDVYEEHPRPQYLARLAHVKRRQLNVVTGENEPMVPFWRMRLPATLMS 337
D D+YE P YL R L EN P++ W +R LM+
Sbjct: 911 DKIDLDLYEPLPENSYLVAAELRVLRALRHKNPENIPLLEKWEVRALHQLMA 962
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -1
Query: 709 SNILSGSTDDFPFEESDVEYRGVVVHELEQVYLESERVVELGLRPKQF 566
+NI++ +T+ P EE + R V +++ E E +V+ P F
Sbjct: 245 NNIMTNTTEQEPMEERAINVRFSDVQGVDEAKEELEEIVDFLRDPTHF 292
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 428 LRHNDNVLITYSPIMFTTATAACINLCFIFLFNYIYQYLA 547
LR++ L++Y +M AC++L F+ + Y+++Y A
Sbjct: 478 LRYSRQTLLSYH-MMGQGGQFACLHLIFLQIHLYVHRYAA 516
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.4 bits (53), Expect = 8.4
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = -2
Query: 210 SSYTSNPVRSQRCVISAE*RFQSSRKHAAQKLMNMAKNTVVELSKRYVMRDCRQSPSIPL 31
SS + N RSQ +SAE S+ +L ++ ++ +E V + + PS+P
Sbjct: 327 SSLSRNQTRSQLNDLSAENDSTSNSTEYDDQLQSILRSLAIEGDDDEVAKVLPKPPSVPT 386
Query: 30 VPNSCSP 10
+ P
Sbjct: 387 IQAPIPP 393
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,933,505
Number of Sequences: 5004
Number of extensions: 31036
Number of successful extensions: 126
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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