Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0974
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical pr...    69   3e-12
Z99281-50|CAD56259.3|  837|Caenorhabditis elegans Hypothetical p...    69   3e-12
AF036693-3|AAO61431.1|  544|Caenorhabditis elegans Hypothetical ...    30   1.5  
AL023821-1|CAA19438.2|  355|Caenorhabditis elegans Hypothetical ...    30   1.9  
AF022980-14|AAG24190.1|  332|Caenorhabditis elegans Serpentine r...    29   2.6  
AC006767-1|AAF60573.2|  332|Caenorhabditis elegans Serpentine re...    29   3.4  
Z82265-6|CAB05170.2|  537|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AF022971-11|AAZ32813.1|  265|Caenorhabditis elegans Hypothetical...    28   7.8  

>Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical
           protein F56A8.1 protein.
          Length = 1049

 Score = 69.3 bits (162), Expect = 3e-12
 Identities = 53/199 (26%), Positives = 88/199 (44%)
 Frame = +2

Query: 77  FDNSTTVFFAIFMSFWAACFLELWKRYSAEMTHRWDLTGFDVYEEHPRPQYLARLAHVKR 256
           FD     FFA+FMS W + F+++WKR ++ ++++W+   F   E   RP++  R + VK 
Sbjct: 341 FDTKMNAFFAVFMSIWGSVFVQIWKRNNSVLSYQWNSDDFHAIEP-DRPEF--RGSKVKE 397

Query: 257 RQLNVVTGENEPMVPFWRMRLPATLMSFSXXXXXXXXXXXXXXXXXXYRMSLLGAAVLRH 436
              + +TGE+  + P    R    L SF                    ++ +    V   
Sbjct: 398 ---DPITGEDIWISPA-LARYIKMLASFVFVSFSMLVVVISLMLVTLLKIWM----VYNF 449

Query: 437 NDNVLITYSPIMFTTATAACINLCFIFLFNYIYQYLAEWLTEKELLRTQTEFDDSLTLKI 616
                 T+   +      + +N         IY  L   L   E  RT++E ++SL +KI
Sbjct: 450 QCTKEYTFHCWLSAAFLPSILNTLSAMGLGAIYSNLVSRLNSWENHRTESEHNNSLIVKI 509

Query: 617 YLLQFVNYYASIFYIAFFK 673
           +  Q VN Y S+FY+AF +
Sbjct: 510 FAFQMVNTYTSLFYVAFIR 528


>Z99281-50|CAD56259.3|  837|Caenorhabditis elegans Hypothetical
           protein Y57G11C.37 protein.
          Length = 837

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 6/197 (3%)
 Frame = +2

Query: 95  VFFAIFMSFWAACFLELWKRYSAEMTHRW---DLTGFDVYEEHPRPQYLARLAHVKRRQL 265
           V FA F   W+  +LE WKR  AE+  +W   D T  D Y + PRP +            
Sbjct: 278 VLFAFFNCIWSTIYLEWWKRVQAELAFKWGTYDATQ-DSYLQDPRPAFQGDYL-----AP 331

Query: 266 NVVTGENEPMVPFWRMRLPATLMSFSXXXXXXXXXXXXXXXXXXYRMSLLGAAVLRHNDN 445
           N V+G  EP  P W+     T+M +                      ++   A     D+
Sbjct: 332 NPVSGRLEPFYPAWK----HTVMRYVITYPITFLCVVGMFAAMLAIFTVQDLADFYFGDS 387

Query: 446 VLIT---YSPIMFTTATAACINLCFIFLFNYIYQYLAEWLTEKELLRTQTEFDDSLTLKI 616
            +++   Y P++F            I + + IY+ LA  L + E  RT  E++D L  KI
Sbjct: 388 WMLSWLCYFPMIFYA--------LMIVISDKIYRRLALILNDLENYRTDDEYEDFLITKI 439

Query: 617 YLLQFVNYYASIFYIAF 667
            L QFV  + S+FYIAF
Sbjct: 440 VLFQFVTAFGSLFYIAF 456


>AF036693-3|AAO61431.1|  544|Caenorhabditis elegans Hypothetical
           protein C49A9.8 protein.
          Length = 544

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +2

Query: 521 FNYIYQYLAEWLTEKELLRTQTEFDDSLTLKIYLLQFVNYYASIFYIA 664
           F+++   L + +    +  TQ+ F+D +T+K  LL F+ +Y   F  A
Sbjct: 173 FDHVSDILGQPIAPSYVPGTQSFFNDRMTMKERLLNFIQFYYGRFTFA 220


>AL023821-1|CAA19438.2|  355|Caenorhabditis elegans Hypothetical
           protein Y102A5B.2 protein.
          Length = 355

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +2

Query: 410 LLGAAVLRHNDNVLITYSPIMFTTATAACINLCFIFLFNYIYQYLAEWLTEK 565
           LLGAAV+ ++D   +  SP ++          C +   N++Y     W TE+
Sbjct: 287 LLGAAVIYYDDIYWLDGSPAVYNYIERYQHGACLLLNVNWVYITDGAWYTER 338


>AF022980-14|AAG24190.1|  332|Caenorhabditis elegans Serpentine
           receptor, class j protein57 protein.
          Length = 332

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 21/66 (31%), Positives = 34/66 (51%)
 Frame = +2

Query: 512 IFLFNYIYQYLAEWLTEKELLRTQTEFDDSLTLKIYLLQFVNYYASIFYIAFFKGKIIGR 691
           + L ++IY+YL   +    L  T+  F   LT+  ++  FV Y+A+   I +F G+    
Sbjct: 105 VLLIHFIYRYLV--IHNSSL--TRNNFHWYLTISAFV--FVLYFATWHAICYFPGRANVE 158

Query: 692 PGEYIR 709
             EYIR
Sbjct: 159 IREYIR 164


>AC006767-1|AAF60573.2|  332|Caenorhabditis elegans Serpentine
           receptor, class j protein55 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/66 (31%), Positives = 34/66 (51%)
 Frame = +2

Query: 512 IFLFNYIYQYLAEWLTEKELLRTQTEFDDSLTLKIYLLQFVNYYASIFYIAFFKGKIIGR 691
           + L ++IY+YL   +    L  T+  F   LT+   +  FV Y+A+ + I +F G+    
Sbjct: 105 VLLIHFIYRYLV--IQNSSL--TRHNFHWYLTISAVV--FVVYFATWYAICYFPGRANVE 158

Query: 692 PGEYIR 709
             EYIR
Sbjct: 159 IKEYIR 164


>Z82265-6|CAB05170.2|  537|Caenorhabditis elegans Hypothetical
           protein F02H6.1 protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -1

Query: 712 ESNILSGSTDDFPFEESDVEYRGVVVHELEQVYLESERVVELGLRPK 572
           + NI +G  +DF  E++ +EY  +V    E V  E+ R+  + L P+
Sbjct: 118 QDNIAAGG-EDFDAEQAGMEYEAIVARRAEIV--ENARIEMIDLEPE 161


>AF022971-11|AAZ32813.1|  265|Caenorhabditis elegans Hypothetical
           protein C31B8.16 protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +2

Query: 440 DNVLITYSPIMFTTATAACINLCFIFLFNYIYQYLAEWLTEKELLRTQTEFDDSL 604
           D ++I ++ I+F +     I +C +++  Y      E    KE+ +   EF D +
Sbjct: 137 DIMIIAFACILFMSLGLLLIAICILYVLIYYELQRQEMYMAKEIYKQNKEFIDGI 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,914,948
Number of Sequences: 27780
Number of extensions: 173174
Number of successful extensions: 617
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)