Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0972
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 59 5e-10
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 59 5e-10
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 59 5e-10
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 59 5e-10
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 59 5e-10
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 59 5e-10
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 59 5e-10
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 59 5e-10
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 59 5e-10
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 59 5e-10
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 59 5e-10
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom... 27 3.4
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 26 4.5
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 26 6.0
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 7.9
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 42 WPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVPAL--PWHKLASDIFEYRKKS---- 203
W G+ + ++ V+ C C +P PW L+ D +S
Sbjct: 943 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002
Query: 204 -YIILVDYFSNY-VEVGQLANISSKHVINFLREQ-FARHGIPAQLVTDNGPAYSSREFRM 374
++VD FS + V +I+++ ++ A G P +++ DN ++S+ ++
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
F H + + S P+ PQ++G++ERT Q+V+ LL +C+ S
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL-RCVCS 1101
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 42 WPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVPAL--PWHKLASDIFEYRKKS---- 203
W G+ + ++ V+ C C +P PW L+ D +S
Sbjct: 943 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002
Query: 204 -YIILVDYFSNY-VEVGQLANISSKHVINFLREQ-FARHGIPAQLVTDNGPAYSSREFRM 374
++VD FS + V +I+++ ++ A G P +++ DN ++S+ ++
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
F H + + S P+ PQ++G++ERT Q+V+ LL +C+ S
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL-RCVCS 1101
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 42 WPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVPAL--PWHKLASDIFEYRKKS---- 203
W G+ + ++ V+ C C +P PW L+ D +S
Sbjct: 943 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002
Query: 204 -YIILVDYFSNY-VEVGQLANISSKHVINFLREQ-FARHGIPAQLVTDNGPAYSSREFRM 374
++VD FS + V +I+++ ++ A G P +++ DN ++S+ ++
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
F H + + S P+ PQ++G++ERT Q+V+ LL +C+ S
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL-RCVCS 1101
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 42 WPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVPAL--PWHKLASDIFEYRKKS---- 203
W G+ + ++ V+ C C +P PW L+ D +S
Sbjct: 943 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002
Query: 204 -YIILVDYFSNY-VEVGQLANISSKHVINFLREQ-FARHGIPAQLVTDNGPAYSSREFRM 374
++VD FS + V +I+++ ++ A G P +++ DN ++S+ ++
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
F H + + S P+ PQ++G++ERT Q+V+ LL +C+ S
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL-RCVCS 1101
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 42 WPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVPAL--PWHKLASDIFEYRKKS---- 203
W G+ + ++ V+ C C +P PW L+ D +S
Sbjct: 943 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002
Query: 204 -YIILVDYFSNY-VEVGQLANISSKHVINFLREQ-FARHGIPAQLVTDNGPAYSSREFRM 374
++VD FS + V +I+++ ++ A G P +++ DN ++S+ ++
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
F H + + S P+ PQ++G++ERT Q+V+ LL +C+ S
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL-RCVCS 1101
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 42 WPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVPAL--PWHKLASDIFEYRKKS---- 203
W G+ + ++ V+ C C +P PW L+ D +S
Sbjct: 943 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002
Query: 204 -YIILVDYFSNY-VEVGQLANISSKHVINFLREQ-FARHGIPAQLVTDNGPAYSSREFRM 374
++VD FS + V +I+++ ++ A G P +++ DN ++S+ ++
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
F H + + S P+ PQ++G++ERT Q+V+ LL +C+ S
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL-RCVCS 1101
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 42 WPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVPAL--PWHKLASDIFEYRKKS---- 203
W G+ + ++ V+ C C +P PW L+ D +S
Sbjct: 943 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002
Query: 204 -YIILVDYFSNY-VEVGQLANISSKHVINFLREQ-FARHGIPAQLVTDNGPAYSSREFRM 374
++VD FS + V +I+++ ++ A G P +++ DN ++S+ ++
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
F H + + S P+ PQ++G++ERT Q+V+ LL +C+ S
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL-RCVCS 1101
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 42 WPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVPAL--PWHKLASDIFEYRKKS---- 203
W G+ + ++ V+ C C +P PW L+ D +S
Sbjct: 943 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002
Query: 204 -YIILVDYFSNY-VEVGQLANISSKHVINFLREQ-FARHGIPAQLVTDNGPAYSSREFRM 374
++VD FS + V +I+++ ++ A G P +++ DN ++S+ ++
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
F H + + S P+ PQ++G++ERT Q+V+ LL +C+ S
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL-RCVCS 1101
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 42 WPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVPAL--PWHKLASDIFEYRKKS---- 203
W G+ + ++ V+ C C +P PW L+ D +S
Sbjct: 943 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002
Query: 204 -YIILVDYFSNY-VEVGQLANISSKHVINFLREQ-FARHGIPAQLVTDNGPAYSSREFRM 374
++VD FS + V +I+++ ++ A G P +++ DN ++S+ ++
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
F H + + S P+ PQ++G++ERT Q+V+ LL +C+ S
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL-RCVCS 1101
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 42 WPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVPAL--PWHKLASDIFEYRKKS---- 203
W G+ + ++ V+ C C +P PW L+ D +S
Sbjct: 943 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002
Query: 204 -YIILVDYFSNY-VEVGQLANISSKHVINFLREQ-FARHGIPAQLVTDNGPAYSSREFRM 374
++VD FS + V +I+++ ++ A G P +++ DN ++S+ ++
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
F H + + S P+ PQ++G++ERT Q+V+ LL +C+ S
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL-RCVCS 1101
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 59.3 bits (137), Expect = 5e-10
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 42 WPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVPAL--PWHKLASDIFEYRKKS---- 203
W G+ + ++ V+ C C +P PW L+ D +S
Sbjct: 943 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002
Query: 204 -YIILVDYFSNY-VEVGQLANISSKHVINFLREQ-FARHGIPAQLVTDNGPAYSSREFRM 374
++VD FS + V +I+++ ++ A G P +++ DN ++S+ ++
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
F H + + S P+ PQ++G++ERT Q+V+ LL +C+ S
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL-RCVCS 1101
>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
Eng2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 706
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 315 IPAQLVTDNGPAYSSREFRMFMH-DWEVHHETSSPHYPQSNGKSERTVQSVKNLL 476
+ A L P+ S F MF + DW V H ++ + +GK E + N L
Sbjct: 488 VNALLRDSANPSESDTYFAMFRNFDWFVGHSWATGIFESGDGKDEESTSEDFNFL 542
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 608 SSWQFCI*TSTHENLCRRIQSITWCCSKIQQRQIKILT*IYTFFKQIFHTLYCPFTFT 435
S W+F + TST E + RR W + + K+L + + ++ FHT FT
Sbjct: 365 SQWRFVVGTSTQETIDRR---KLW----TNEEEAKLLDLVKSSYRSSFHTKKMTSLFT 415
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 552 DSPAQILMGRRLNTKLPTTA 611
DSP+ +L GR NT PT +
Sbjct: 179 DSPSSVLSGRMQNTSSPTNS 198
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 432 NGKSERTVQSVKNLLKKCIDSGQDFYLSLLNFRTTPRN 545
NGK+ QS N + C DS + L L F+T N
Sbjct: 3815 NGKTLELEQSYLNFFETCSDSNERGGLESLFFKTHASN 3852
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,539,506
Number of Sequences: 5004
Number of extensions: 49707
Number of successful extensions: 142
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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