Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0972
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein. 73 1e-12
AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein. 71 3e-12
M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenou... 71 5e-12
AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein. 71 5e-12
AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein. 71 5e-12
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 71 5e-12
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 71 5e-12
AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein. 71 5e-12
AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein. 71 5e-12
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 65 2e-10
AK131330-1|BAD18490.1| 153|Homo sapiens protein ( Homo sapiens ... 61 4e-09
AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein. 54 5e-07
AB040899-1|BAA95990.1| 505|Homo sapiens KIAA1466 protein protein. 51 5e-06
AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein. 45 2e-04
AK131351-1|BAD18506.1| 149|Homo sapiens PRECURSOR (EC 1.3.5.1).... 45 3e-04
AK131478-1|BAD18623.1| 266|Homo sapiens protein ( Homo sapiens ... 43 0.001
AK057704-1|BAB71549.1| 120|Homo sapiens protein ( Homo sapiens ... 37 0.060
AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein. 36 0.14
BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein. 34 0.42
AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens ... 34 0.42
AC004947-1|AAQ96877.1| 138|Homo sapiens unknown protein. 31 5.2
AY481572-1|AAS49899.1| 2240|Homo sapiens death inducer-obliterat... 30 9.1
AL117379-1|CAO03650.1| 2240|Homo sapiens death inducer-obliterat... 30 9.1
AL035669-1|CAI95769.2| 2240|Homo sapiens death inducer-obliterat... 30 9.1
>AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein.
Length = 702
Score = 72.9 bits (171), Expect = 1e-12
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Frame = +3
Query: 147 PALPWHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPA 323
P W + + + K SY+ + VD +S+++ S+ HV L FA G+P
Sbjct: 536 PNALWQMDVTHVPSFGKLSYVHVTVDTYSHFMWATCQTGESTSHVKKHLLSCFAVMGVPK 595
Query: 324 QLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLL--------- 476
++ TDNGP Y S+ F+ F+ W++ H T P+ Q ERT +++K L
Sbjct: 596 KIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGGDS 655
Query: 477 KKCIDSGQDFYLSL--LNFRTTPRNGLDSPAQILMGRR 584
K+C L+L LNF RN + A+ L G++
Sbjct: 656 KECTTPQMQLNLALYTLNFLNIYRNQTTTSAEHLTGKK 693
>AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 71.3 bits (167), Expect = 3e-12
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 147 PALPWHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPA 323
P W + + + + SY+ + VD +S+++ S+ HV L FA G+P
Sbjct: 646 PNALWQMDVTHVPSFERLSYVHVTVDTYSHFIWATCQTGESTSHVKKHLLSCFAVMGVPE 705
Query: 324 QLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSG 497
++ TDNGP Y S+ F+ F+ W++ H T P+ Q ERT +++K L K + G
Sbjct: 706 KIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGG 763
>M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenous
retrovirus HERV-K10. ).
Length = 1361
Score = 70.5 bits (165), Expect = 5e-12
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 147 PALPWHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPA 323
P W + + + + SY+ + VD +S+++ S+ HV L FA G+P
Sbjct: 548 PNALWQMDVTHVPSFGRLSYVHVTVDTYSHFIWATCQTGESTSHVKKHLLSCFAVMGVPE 607
Query: 324 QLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSG 497
++ TDNGP Y S+ F+ F+ W++ H T P+ Q ERT +++K L K + G
Sbjct: 608 KIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGG 665
>AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein.
Length = 727
Score = 70.5 bits (165), Expect = 5e-12
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 147 PALPWHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPA 323
P W + + + + SY+ + VD +S+++ S+ HV L FA G+P
Sbjct: 509 PNALWQMDVTHVPSFGRLSYVHVTVDTYSHFIWATCQTGESTSHVKKHLLSCFAVMGVPE 568
Query: 324 QLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSG 497
++ TDNGP Y S+ F+ F+ W++ H T P+ Q ERT +++K L K + G
Sbjct: 569 KIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGG 626
>AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 70.5 bits (165), Expect = 5e-12
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 147 PALPWHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPA 323
P W + + + + SY+ + VD +S+++ S+ HV L FA G+P
Sbjct: 646 PNALWQMDVTHVPSFGRLSYVHVTVDTYSHFIWATCQTGESTSHVKKHLLSCFAVMGVPE 705
Query: 324 QLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSG 497
++ TDNGP Y S+ F+ F+ W++ H T P+ Q ERT +++K L K + G
Sbjct: 706 KIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGG 763
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1879
Score = 70.5 bits (165), Expect = 5e-12
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 147 PALPWHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPA 323
P W + + + + SY+ + VD +S+++ S+ HV L FA G+P
Sbjct: 1569 PNALWQMDVTHVPSFGRLSYVHVTVDTYSHFIWATCQTGESTSHVKKHLLSCFAVMGVPE 1628
Query: 324 QLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSG 497
++ TDNGP Y S+ F+ F+ W++ H T P+ Q ERT +++K L K + G
Sbjct: 1629 KIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGG 1686
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 70.5 bits (165), Expect = 5e-12
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 147 PALPWHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPA 323
P W + + + + SY+ + VD +S+++ S+ HV L FA G+P
Sbjct: 1569 PNALWQMDVTHVPSFGRLSYVHVTVDTYSHFIWATCQTGESTSHVKKHLLSCFAVMGVPE 1628
Query: 324 QLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSG 497
++ TDNGP Y S+ F+ F+ W++ H T P+ Q ERT +++K L K + G
Sbjct: 1629 KIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGG 1686
>AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 70.5 bits (165), Expect = 5e-12
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 147 PALPWHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPA 323
P W + + + + SY+ + VD +S+++ S+ HV L FA G+P
Sbjct: 646 PNALWQMDVTHVPSFGRLSYVHVTVDTYSHFIWATCQTGESTSHVKKHLLSCFAVMGVPE 705
Query: 324 QLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSG 497
++ TDNGP Y S+ F+ F+ W++ H T P+ Q ERT +++K L K + G
Sbjct: 706 KIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGG 763
>AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 70.5 bits (165), Expect = 5e-12
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 147 PALPWHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPA 323
P W + + + + SY+ + VD +S+++ S+ HV L FA G+P
Sbjct: 646 PNALWQMDVTHVPSFGRLSYVHVTVDTYSHFIWATCQTGESTSHVKKHLLSCFAVMGVPE 705
Query: 324 QLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSG 497
++ TDNGP Y S+ F+ F+ W++ H T P+ Q ERT +++K L K + G
Sbjct: 706 KIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGG 763
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1755
Score = 65.3 bits (152), Expect = 2e-10
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Frame = +3
Query: 147 PALPWHKLASDIFEYRKKSYI-ILVDYFS--NYVEVGQLANISSKHVINFLREQFARHGI 317
P W + + + + SY+ + VD +S +++ S+ HV L FA G+
Sbjct: 1569 PNALWQMDVTHVPSFGRLSYVHVTVDTYSYSHFIWATCQTGESTSHVKKHLLSCFAVMGV 1628
Query: 318 PAQLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSG 497
P ++ TDNGP Y S+ F+ F+ W++ H T P+ Q ERT +++K L K + G
Sbjct: 1629 PEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGG 1688
>AK131330-1|BAD18490.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ16337 fis, clone TESTI1000266. ).
Length = 153
Score = 60.9 bits (141), Expect = 4e-09
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +3
Query: 159 WHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPAQLVT 335
W + I E+ K Y+ + +D S G+ +KH++ FA G P ++ T
Sbjct: 24 WQTDVTHIPEFGKLRYVHVSIDLISANALPGESTGYVTKHLLL----TFAFMGQPTKIKT 79
Query: 336 DNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKK 482
+N AY+S +F+ F H W + H T P+ PQ E ++KN+LKK
Sbjct: 80 NNDLAYASSQFQQFCHMWNIQHSTGIPYNPQGQAIVECAHSTLKNMLKK 128
>AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein.
Length = 863
Score = 54.0 bits (124), Expect = 5e-07
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +3
Query: 147 PALPWHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPA 323
P W + I + ++S + + VD +S V + + VI + FA G+P
Sbjct: 642 PGHIWQMDVTHIPSFGRQSCVHVTVDTYSGVVMATAMNKEGVQQVIQHCLQAFAAWGVPH 701
Query: 324 QLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKK 482
+ DN AY+S F F+ ++ + H TS P+ PQ T +KNL+ K
Sbjct: 702 VIKMDNSSAYTSTRFAAFLKEFRISHITSIPYNPQGQAVVGHTHLYLKNLIIK 754
>AB040899-1|BAA95990.1| 505|Homo sapiens KIAA1466 protein protein.
Length = 505
Score = 50.8 bits (116), Expect = 5e-06
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Frame = +3
Query: 150 ALPWHKLASDIFEY-RKKSY---IILVDYFSNYVEVGQLANISSKHVINFL-REQFARHG 314
A P L D E R + Y ++ V FS +VE ++ V L ++ R G
Sbjct: 274 ATPCENLLVDFTELPRARGYQYMLVFVCTFSGWVEAFPTRIEKAQEVTRLLLKDIIPRFG 333
Query: 315 IPAQLVTDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
+P L +DNGPA+ + + ++ + ++PQS+GK + Q++K+LLK C +
Sbjct: 334 LPLTLGSDNGPAFMAEVVQQLSQLLKIKWKLHIVYHPQSSGKVQWMNQTLKHLLKFCQEP 393
Query: 495 ----GQDFYLSLLNFR--TTPRNGLDSPAQILMGR 581
Q ++ L R T GL SP +I+ GR
Sbjct: 394 HLRWDQVLPMAFLQVRCTLTKLTGL-SPCEIVFGR 427
>AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.
Length = 1183
Score = 45.2 bits (102), Expect = 2e-04
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 13/137 (9%)
Frame = +3
Query: 288 LREQFARHGIPAQLVTDNGPAYSS----REFRMFMHDWEVHHETSSPHYPQSNGKSERTV 455
LR+ R G+P ++ +DNGPA+ + + ++ + W++H + + PQS+GK E+
Sbjct: 944 LRDPIPRFGLPLRIGSDNGPAFVADLVQKRAKVLGNTWKLH----AAYRPQSSGKVEQMN 999
Query: 456 QSVKNLL-KKCIDSG----QDFYLSLLNFRTTP--RNGLDSPAQILMGR--RLNTKLPTT 608
++KN K C ++G Q + L R TP R G SP +IL R + LP T
Sbjct: 1000 WTIKNSKGKVCQETGLKWIQALPMVLFKIRCTPSKRTGY-SPYEILYHRPPPILRGLPGT 1058
Query: 609 AELLREKVDNERNYKAI 659
L E ++ +R +A+
Sbjct: 1059 PRELGE-IELQRQLQAL 1074
>AK131351-1|BAD18506.1| 149|Homo sapiens PRECURSOR (EC 1.3.5.1).
protein.
Length = 149
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 198 KSYIILVDYFSNYVEVGQLANISSKHVINFL-REQFARHGIPAQLVTDNGPAYSS 359
K ++LVD FS + E N ++ V+ FL E R+G+PA + +DNGPA++S
Sbjct: 82 KYLLVLVDTFSGWTEAFATKNETANLVVKFLLNEIIPRYGLPAAIGSDNGPAFTS 136
>AK131478-1|BAD18623.1| 266|Homo sapiens protein ( Homo sapiens
cDNA FLJ16646 fis, clone TESTI4032090. ).
Length = 266
Score = 43.2 bits (97), Expect = 0.001
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +3
Query: 159 WHKLASDIFEYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPAQLVT 335
W + + + + +Y+ VD FS + + SS +V L + F GI A + T
Sbjct: 141 WEMDVTHVPSFGRLAYVHACVDTFSLWAACQ--SGESSAYVKRHLLQCFVVIGILASIKT 198
Query: 336 DNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSGQDF 506
DN P Y+S+ F + H T P+ Q ER S+K L+K +D+
Sbjct: 199 DNAPGYTSQALATFFSIRNIKHITGIPYNSQGQAIVERMNLSLKQQLQKQKGENRDY 255
>AK057704-1|BAB71549.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ33142 fis, clone UTERU1000192. ).
Length = 120
Score = 37.1 bits (82), Expect = 0.060
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +3
Query: 198 KSYIILVDYFSNYVEVGQLANISSKHVIN-FLREQFARHGIPAQLVTDNGPAYSSREFRM 374
K ++L+ + +VE ++ V LR+ R G+P ++ +DNG + + +
Sbjct: 8 KYLLVLLCTYCGWVEAYPTLTEKAREVTCVLLRDLIPRFGLPLRISSDNGLTFVADLVQK 67
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLL-KKCIDSG 497
+ + + + PQS+ K+E+ Q++KN L K C ++G
Sbjct: 68 IAKVLGIIWKLHAAYRPQSSRKAEQMNQTIKNSLGKVCQETG 109
>AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.
Length = 1819
Score = 35.9 bits (79), Expect = 0.14
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Frame = +3
Query: 39 FWPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXXVP---ALPWHKLASD------IFEY 191
+WPG+ E V+ R C C P PW L + I E
Sbjct: 1492 WWPGMQEHVKDYCRSCLFCIPRNLIGSELKVIESPWPLRSTAPWSNLQIEVVGPVTISEE 1551
Query: 192 RKKSYIILVDYFSNYVEVGQLANISSKHVIN-FLREQFARHGIPAQLVTDNGPAYS 356
K +I+ D + +VE L + V L+ FAR G+P +L GP ++
Sbjct: 1552 GHKHVLIVADPNTRWVEAFPLKPYTHTAVAQVLLQHVFARWGVPVRLEAAQGPQFA 1607
>BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein.
Length = 439
Score = 34.3 bits (75), Expect = 0.42
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +3
Query: 219 DYFSNYVEVGQLANISSKHVINFLREQFARHGIPAQLVTDNGPAYSSREFRMFMHDWEVH 398
D+ + ++ + L + V++ L + F G P+ L +D+G ++++ W
Sbjct: 233 DHSTKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHELNELWPDL 292
Query: 399 HETSSPHYP-QSNGKSERTVQSVKNLLKKCIDSGQDFYLSL-LNFRTTPRN 545
S ++P QS G E + VKN++ + S + + L F RN
Sbjct: 293 KIVSGKYHPGQSQGSLEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRN 343
>AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ16113 fis, clone 3NB692004724. ).
Length = 492
Score = 34.3 bits (75), Expect = 0.42
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +3
Query: 219 DYFSNYVEVGQLANISSKHVINFLREQFARHGIPAQLVTDNGPAYSSREFRMFMHDWEVH 398
D+ + ++ + L + V++ L + F G P+ L +D+G ++++ W
Sbjct: 286 DHSTKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHELNELWPDL 345
Query: 399 HETSSPHYP-QSNGKSERTVQSVKNLLKKCIDSGQDFYLSL-LNFRTTPRN 545
S ++P QS G E + VKN++ + S + + L F RN
Sbjct: 346 KIVSGKYHPGQSQGSLEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRN 396
>AC004947-1|AAQ96877.1| 138|Homo sapiens unknown protein.
Length = 138
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +3
Query: 537 PRNGLDSPAQILMGRRLNTKLPTTAEL 617
PRN L PA MG+ L T LPT A L
Sbjct: 83 PRNTLKHPAHHGMGKNLATSLPTAASL 109
>AY481572-1|AAS49899.1| 2240|Homo sapiens death inducer-obliterator-3
protein.
Length = 2240
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 186 EYRKKSYIILVDYFSNYVEVGQLANISSKHVIN-FLREQFARHGIPAQLVTDNGPAYSS 359
E + +YI L YFS+ G +AN +++HV + +L A+ +P++L+ GP S
Sbjct: 1127 EEEEVAYISLYSYFSSRGRFGVVAN-NNRHVKDLYLIPLSAQDPVPSKLLPFEGPGLES 1184
>AL117379-1|CAO03650.1| 2240|Homo sapiens death inducer-obliterator 1
protein.
Length = 2240
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 186 EYRKKSYIILVDYFSNYVEVGQLANISSKHVIN-FLREQFARHGIPAQLVTDNGPAYSS 359
E + +YI L YFS+ G +AN +++HV + +L A+ +P++L+ GP S
Sbjct: 1127 EEEEVAYISLYSYFSSRGRFGVVAN-NNRHVKDLYLIPLSAQDPVPSKLLPFEGPGLES 1184
>AL035669-1|CAI95769.2| 2240|Homo sapiens death inducer-obliterator 1
protein.
Length = 2240
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 186 EYRKKSYIILVDYFSNYVEVGQLANISSKHVIN-FLREQFARHGIPAQLVTDNGPAYSS 359
E + +YI L YFS+ G +AN +++HV + +L A+ +P++L+ GP S
Sbjct: 1127 EEEEVAYISLYSYFSSRGRFGVVAN-NNRHVKDLYLIPLSAQDPVPSKLLPFEGPGLES 1184
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,575,943
Number of Sequences: 237096
Number of extensions: 1698250
Number of successful extensions: 7328
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 7192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7325
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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