Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0972
(699 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p pro... 77 2e-14
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 62 7e-10
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 56 5e-08
AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA... 52 6e-07
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 52 1e-06
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 51 1e-06
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 49 5e-06
X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical p... 43 3e-04
X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical p... 43 3e-04
X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein ( Dros... 43 3e-04
X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprot... 43 3e-04
BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p pro... 43 3e-04
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 38 0.017
X07656-2|CAA30503.1| 982|Drosophila melanogaster protein ( Dros... 30 3.5
BT030454-1|ABP87896.1| 1018|Drosophila melanogaster IP18723p pro... 29 4.6
BT009973-1|AAQ22442.1| 1066|Drosophila melanogaster RE62514p pro... 29 4.6
BT004866-1|AAO45222.1| 1128|Drosophila melanogaster LD43531p pro... 29 4.6
AY119539-1|AAM50193.1| 1176|Drosophila melanogaster GH23529p pro... 29 4.6
AF129433-1|AAD21090.1| 883|Drosophila melanogaster histone deac... 29 4.6
AE014298-2131|AAN09662.1| 1138|Drosophila melanogaster CG6170-PC... 29 4.6
AE014298-2130|AAN09661.1| 1135|Drosophila melanogaster CG6170-PB... 29 4.6
AE014298-2129|AAF48443.2| 1128|Drosophila melanogaster CG6170-PA... 29 4.6
AE014297-1385|AAF54701.3| 1176|Drosophila melanogaster CG31116-P... 29 4.6
AE014297-1384|AAN13532.2| 1049|Drosophila melanogaster CG31116-P... 29 4.6
AE014297-1383|AAF54702.3| 1193|Drosophila melanogaster CG31116-P... 29 4.6
>AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p
protein.
Length = 451
Score = 77.0 bits (181), Expect = 2e-14
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 8/162 (4%)
Frame = +3
Query: 39 FWPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXX-VPALPWHKLASDIF------EYRK 197
+WPG+ V + VR C C VP PW + +D ++
Sbjct: 121 YWPGMHRGVRKYVRNCECCMMYKPSQLQAAGKMLTQVPEEPWATVCADFVGPLPRSKHGN 180
Query: 198 KSYIILVDYFSNYVEVGQLANISSKHVINFLREQF-ARHGIPAQLVTDNGPAYSSREFRM 374
++LVD FS + E+ + +++ + +RE+ AR+G+P ++TDN + R FR
Sbjct: 181 SMLLVLVDRFSKWTEIVPMRRATTETMRKAVRERIVARYGVPKVMITDNNVQLTIRAFRK 240
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSGQ 500
F+ + V H+ ++P+ PQ N +ER ++VK ++ + + Q
Sbjct: 241 FLEELGVRHQLTAPYTPQEN-PTERANRTVKTMIAQFTGADQ 281
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 62.1 bits (144), Expect = 7e-10
Identities = 30/109 (27%), Positives = 58/109 (53%)
Frame = +3
Query: 195 KKSYIILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPAQLVTDNGPAYSSREFRM 374
KK +++VD F+ +V + ++K VI L + F + P +++D G ++S +F
Sbjct: 1285 KKHILVIVDAFTKFVRLYATKTTNTKEVIQSLNDYFRAYSRPKCIISDRGACFTSGDFDS 1344
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDSGQDFYLSLL 521
F+ + V H + PQ+NG+ ER +S+ ++ K I+ Q + L+
Sbjct: 1345 FLKECNVKHIKIATGSPQANGQVERINRSLGPMISKLIEPDQGLHWDLV 1393
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 56.0 bits (129), Expect = 5e-08
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 2/153 (1%)
Frame = +3
Query: 39 FWPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXX--VPALPWHKLASDIFEYRKKSYII 212
F+P + E + + +R+C C +P+ P L DI+ K +
Sbjct: 774 FFPHMKERITQLIRKCETCLKLKYDRQPQKITYQISELPSKPLDILHIDIYTINKNYNLT 833
Query: 213 LVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPAQLVTDNGPAYSSREFRMFMHDWE 392
++D FS + + N + +V+ L+ ++ GIP +L+ D G ++S F F +
Sbjct: 834 IIDKFSKFAAAYPITNRNCINVVKALKHFISQFGIPKKLIYDQGAEFASDMFNKFCTQFN 893
Query: 393 VHHETSSPHYPQSNGKSERTVQSVKNLLKKCID 491
+ +S SN ER ++ + + +D
Sbjct: 894 IDLHVTSFQQSSSNSPVERLHSTLTEIYRIILD 926
>AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA
protein.
Length = 131
Score = 52.4 bits (120), Expect = 6e-07
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +3
Query: 186 EYRKKSYI-ILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPAQLVTDNGPAYSSR 362
++R KS+I ++VD FS YV + + V+N + Q G P ++V+D G A++S
Sbjct: 9 KWRLKSFIAVIVDAFSKYVWFYPTRSTGVEEVLNCIERQALNFGKPFRIVSDRGAAFTSH 68
Query: 363 EFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKN 470
F+ + ++ H P NG++E Q + N
Sbjct: 69 LFKEYYEKHQIRHLLIPTGVPLGNGRNEEEKQFMVN 104
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 51.6 bits (118), Expect = 1e-06
Identities = 30/154 (19%), Positives = 62/154 (40%), Gaps = 2/154 (1%)
Frame = +3
Query: 39 FWPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXX--VPALPWHKLASDIFEYRKKSYII 212
++P + + +R C C P+ P + DI+ +
Sbjct: 885 YFPNMKNKISELIRNCETCLKLKYDRQPQNIVFETPETPSKPLDIIHIDIYTINNNFNLT 944
Query: 213 LVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPAQLVTDNGPAYSSREFRMFMHDWE 392
++D FS + V + N + + I ++ F++ G+P +L+ D G + + FR F +
Sbjct: 945 IIDKFSKFAAVYPIPNRNGINCIKAIKNFFSQFGLPKKLIHDQGVEFCNDIFRKFCSQYN 1004
Query: 393 VHHETSSPHYPQSNGKSERTVQSVKNLLKKCIDS 494
+ +S SN ER S+ + + +D+
Sbjct: 1005 ILLHVTSFQQSSSNSPVERLHSSLTEIYRIILDT 1038
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 51.2 bits (117), Expect = 1e-06
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Frame = +3
Query: 198 KSYIILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPAQLVTDNGPAYSSREFRMF 377
K + VD FS +V + + + V+ L + G P ++V+D G A++S F F
Sbjct: 1057 KYILATVDAFSKFVWLFPTKSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFEQF 1116
Query: 378 MHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKK-CIDSGQDFYLSLLNFRTT----PR 542
M V H ++ + NG+ ER + + ++ K D +Y + +
Sbjct: 1117 MSSHNVEHVCTTTGVARGNGQIERVNRLILAIISKLSSDEPSKWYKYVPEVQKAINCHVH 1176
Query: 543 NGLD-SPAQILMGRRLNTKL-PTTAELLREKV---DNERNY---KAIMMNREKIKKHYDR 698
+ L SP +++ G ++ T++ ELL+E+V NE Y + + N E+ +K Y R
Sbjct: 1177 SSLKLSPFEVMFGTKMYTRVEDRLLELLQEEVVCQFNEDRYEMRQLVKRNIEQAQKDYKR 1236
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
Length = 1026
Score = 49.2 bits (112), Expect = 5e-06
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Frame = +3
Query: 198 KSYIILVDYFSNYVEVGQLANISSKHVINFLREQFARHGIPAQLVTDNGPAYSSREFRMF 377
K + VD FS +V + + + V+ L + G P ++V+D G A++S F F
Sbjct: 750 KYILATVDAFSKFVWLFPTKSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFEQF 809
Query: 378 MHDWEVHHETSSPHYPQSNGKSERTVQ-SVKNLLKKCIDSGQDFYLSLLNFRTT----PR 542
M V H ++ + NG+ ER + ++ + K D +Y + +
Sbjct: 810 MSSHNVEHVCTTTGVARGNGQIERVNRLNLAIISKLSSDEPSKWYKYVPEVQKAINCHVH 869
Query: 543 NGLD-SPAQILMGRRLNTKL-PTTAELLREKV---DNERNY---KAIMMNREKIKKHYDR 698
+ L SP +++ G ++ T++ ELL+E+V NE Y + + N E+ +K Y R
Sbjct: 870 SSLKLSPFEVMFGTKMYTRVEDRLLELLQEEVVCQFNEDRYEMRQLVKRNIEQAQKDYKR 929
>X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical
protein protein.
Length = 1017
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 195 KKSYIILVDYFSNYVEVGQLANISSKHVI--NFLREQFARHGIPA-QLVTDNGPAYSSRE 365
K ++I VD F++Y + S + +F+ + A + L DNG Y S E
Sbjct: 108 KNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNE 167
Query: 366 FRMFMHDWEVHHETSSPHYPQSNGKSERTVQSV 464
R F + + + PH PQ NG SER ++++
Sbjct: 168 MRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 200
>X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical
protein protein.
Length = 1409
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 195 KKSYIILVDYFSNYVEVGQLANISSKHVI--NFLREQFARHGIPA-QLVTDNGPAYSSRE 365
K ++I VD F++Y + S + +F+ + A + L DNG Y S E
Sbjct: 500 KNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNE 559
Query: 366 FRMFMHDWEVHHETSSPHYPQSNGKSERTVQSV 464
R F + + + PH PQ NG SER ++++
Sbjct: 560 MRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
>X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein (
Drosophila melanogastervirus like particle RNA (VLP
H-RNA). ).
Length = 1288
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 195 KKSYIILVDYFSNYVEVGQLANISSKHVI--NFLREQFARHGIPA-QLVTDNGPAYSSRE 365
K ++I VD F++Y + S + +F+ + A + L DNG Y S E
Sbjct: 500 KNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNE 559
Query: 366 FRMFMHDWEVHHETSSPHYPQSNGKSERTVQSV 464
R F + + + PH PQ NG SER ++++
Sbjct: 560 MRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
>X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprotein
protein.
Length = 1409
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 195 KKSYIILVDYFSNYVEVGQLANISSKHVI--NFLREQFARHGIPA-QLVTDNGPAYSSRE 365
K ++I VD F++Y + S + +F+ + A + L DNG Y S E
Sbjct: 500 KNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNE 559
Query: 366 FRMFMHDWEVHHETSSPHYPQSNGKSERTVQSV 464
R F + + + PH PQ NG SER ++++
Sbjct: 560 MRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
>BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p
protein.
Length = 1409
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 195 KKSYIILVDYFSNYVEVGQLANISSKHVI--NFLREQFARHGIPA-QLVTDNGPAYSSRE 365
K ++I VD F++Y + S + +F+ + A + L DNG Y S E
Sbjct: 500 KNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNE 559
Query: 366 FRMFMHDWEVHHETSSPHYPQSNGKSERTVQSV 464
R F + + + PH PQ NG SER ++++
Sbjct: 560 MRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 37.5 bits (83), Expect = 0.017
Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 14/195 (7%)
Frame = +3
Query: 39 FWPGLSEDVEREVRRCAACXXXXXXXXXXXXXXXX-VPALPWHKLASDIFEYRKKSY--- 206
+WP +++ + + V+ C C PA + + D KS
Sbjct: 682 YWPQMTKTISKYVKTCLKCQQAKITTHTKTPLTLMPTPATAFDTVLIDTIGPLPKSEDGN 741
Query: 207 ---IILVDYFSNYVEVGQLANISSKHVINFLREQFA-RHGIPAQLVTDNGPAYSSREFRM 374
+ ++ + ++ N S+K V + E F ++G +TD G Y +
Sbjct: 742 EYAVTIICDLTKFLVTIPTPNKSAKTVAKAIFELFVLKYGPMKTFITDQGTEYKNSLMNE 801
Query: 375 FMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCID---SGQDFYLSLLN--FRTTP 539
+ + TSS H+ Q+ G ER+ ++ ++ I S D +L F TTP
Sbjct: 802 LCKYMHIENLTSSAHHHQTLGTIERSHRTFNEYIRSYISVNKSDWDIWLPYFTYCFNTTP 861
Query: 540 RNGLD-SPAQILMGR 581
D P +++ GR
Sbjct: 862 SIVHDYCPYELVFGR 876
>X07656-2|CAA30503.1| 982|Drosophila melanogaster protein (
Drosophila melanogasterretrotransposon 1731 sequence. ).
Length = 982
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3
Query: 333 TDNGPAYSSREFRMFMHDWEVHHETSSPHYPQSNGKSERTVQSVKNLLKKCI---DSGQD 503
+DNG + + F ++ + + + PH PQ NG +ER +++ + + + + G+
Sbjct: 267 SDNGGEFVNNVFDDYLKAHGIARQLTIPHTPQQNGVAERANRTLVEMARCMLLQSELGEA 326
Query: 504 FYLSLLNFRTTPRNGLDSPA 563
+ +N RN S A
Sbjct: 327 LWAEAINTAVYLRNRSTSRA 346
>BT030454-1|ABP87896.1| 1018|Drosophila melanogaster IP18723p
protein.
Length = 1018
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -2
Query: 581 STHENLCRRIQSITWCCSKIQQRQIKILT*IYTFFKQIFHTL--YCPFTFTIRL 426
STHE + + + TW + Q ++T T + +F L Y FTF + +
Sbjct: 425 STHEQVTQLFSNFTWSRDDLTVEQAAVVTHWMTSYTSVFGNLVIYTLFTFVVSI 478
>BT009973-1|AAQ22442.1| 1066|Drosophila melanogaster RE62514p
protein.
Length = 1066
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -2
Query: 581 STHENLCRRIQSITWCCSKIQQRQIKILT*IYTFFKQIFHTL--YCPFTFTIRL 426
STHE + + + TW + Q ++T T + +F L Y FTF + +
Sbjct: 473 STHEQVTQLFSNFTWSRDDLTVEQAAVVTHWMTSYTSVFGNLVIYTLFTFVVSI 526
>BT004866-1|AAO45222.1| 1128|Drosophila melanogaster LD43531p
protein.
Length = 1128
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 351 YSSREF---RMFMHDWEVHHETSSPHYPQSNGK 440
Y+ R+F R+ + DW+VHH + H +SN K
Sbjct: 685 YAIRDFGLERVLIVDWDVHHGNGTQHIFESNPK 717
>AY119539-1|AAM50193.1| 1176|Drosophila melanogaster GH23529p
protein.
Length = 1176
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -2
Query: 581 STHENLCRRIQSITWCCSKIQQRQIKILT*IYTFFKQIFHTL--YCPFTFTIRL 426
STHE + + + TW + Q ++T T + +F L Y FTF + +
Sbjct: 456 STHEQVTQLFSNFTWSRDDLTVEQAAVVTHWMTSYTSVFGNLVIYTLFTFVVSI 509
>AF129433-1|AAD21090.1| 883|Drosophila melanogaster histone
deacetylase HDA2 protein.
Length = 883
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 351 YSSREF---RMFMHDWEVHHETSSPHYPQSNGK 440
Y+ R+F R+ + DW+VHH + H +SN K
Sbjct: 610 YAIRDFGLERVLIVDWDVHHGNGTQHIFESNPK 642
>AE014298-2131|AAN09662.1| 1138|Drosophila melanogaster CG6170-PC,
isoform C protein.
Length = 1138
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 351 YSSREF---RMFMHDWEVHHETSSPHYPQSNGK 440
Y+ R+F R+ + DW+VHH + H +SN K
Sbjct: 695 YAIRDFGLERVLIVDWDVHHGNGTQHIFESNPK 727
>AE014298-2130|AAN09661.1| 1135|Drosophila melanogaster CG6170-PB,
isoform B protein.
Length = 1135
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 351 YSSREF---RMFMHDWEVHHETSSPHYPQSNGK 440
Y+ R+F R+ + DW+VHH + H +SN K
Sbjct: 692 YAIRDFGLERVLIVDWDVHHGNGTQHIFESNPK 724
>AE014298-2129|AAF48443.2| 1128|Drosophila melanogaster CG6170-PA,
isoform A protein.
Length = 1128
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 351 YSSREF---RMFMHDWEVHHETSSPHYPQSNGK 440
Y+ R+F R+ + DW+VHH + H +SN K
Sbjct: 685 YAIRDFGLERVLIVDWDVHHGNGTQHIFESNPK 717
>AE014297-1385|AAF54701.3| 1176|Drosophila melanogaster CG31116-PA,
isoform A protein.
Length = 1176
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -2
Query: 581 STHENLCRRIQSITWCCSKIQQRQIKILT*IYTFFKQIFHTL--YCPFTFTIRL 426
STHE + + + TW + Q ++T T + +F L Y FTF + +
Sbjct: 456 STHEQVTQLFSNFTWSRDDLTVEQAAVVTHWMTSYTSVFGNLVIYTLFTFVVSI 509
>AE014297-1384|AAN13532.2| 1049|Drosophila melanogaster CG31116-PC,
isoform C protein.
Length = 1049
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -2
Query: 581 STHENLCRRIQSITWCCSKIQQRQIKILT*IYTFFKQIFHTL--YCPFTFTIRL 426
STHE + + + TW + Q ++T T + +F L Y FTF + +
Sbjct: 456 STHEQVTQLFSNFTWSRDDLTVEQAAVVTHWMTSYTSVFGNLVIYTLFTFVVSI 509
>AE014297-1383|AAF54702.3| 1193|Drosophila melanogaster CG31116-PD,
isoform D protein.
Length = 1193
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -2
Query: 581 STHENLCRRIQSITWCCSKIQQRQIKILT*IYTFFKQIFHTL--YCPFTFTIRL 426
STHE + + + TW + Q ++T T + +F L Y FTF + +
Sbjct: 473 STHEQVTQLFSNFTWSRDDLTVEQAAVVTHWMTSYTSVFGNLVIYTLFTFVVSI 526
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,386,187
Number of Sequences: 53049
Number of extensions: 536754
Number of successful extensions: 1336
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -