Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0964
         (718 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    71   8e-15
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.9  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   2.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.7  

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 71.3 bits (167), Expect = 8e-15
 Identities = 35/51 (68%), Positives = 36/51 (70%)
 Frame = +2

Query: 566 LTREIDGFVLNRIQYAILDEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLG 718
           LTREIDGFVLNRIQYAIL+E WRL              MSEGLGMRYAFLG
Sbjct: 1   LTREIDGFVLNRIQYAILNEAWRLVADGILNAKDVDAVMSEGLGMRYAFLG 51


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 700 HSKSFRHNFINIRYINNFVVN 638
           H     HN++N   ++ FVVN
Sbjct: 527 HEVDLVHNYMNFMQMDEFVVN 547


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 700 HSKSFRHNFINIRYINNFVVN 638
           H     HN++N   ++ FVVN
Sbjct: 527 HEVDLVHNYMNFMQMDEFVVN 547


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 700 HSKSFRHNFINIRYINNFVVN 638
           H     HN++N   ++ FVVN
Sbjct: 153 HEVDLVHNYMNFMQMDEFVVN 173


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 48  WKWFNREIMGDVVCLSWLS 104
           W+ F   I GD+ C  WL+
Sbjct: 125 WEVFKVWIFGDLWCSIWLA 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,018
Number of Sequences: 438
Number of extensions: 4199
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)