Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0963
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC116457-1|AAI16458.1| 80|Homo sapiens CAMTA1 protein protein. 31 3.8
Z98884-1|CAI21433.1| 1673|Homo sapiens calmodulin binding transc... 29 8.7
Z98052-1|CAI21596.1| 1673|Homo sapiens calmodulin binding transc... 29 8.7
Z97635-1|CAI20961.1| 1673|Homo sapiens calmodulin binding transc... 29 8.7
X72177-1|CAA50994.1| 934|Homo sapiens complement component C6 p... 29 8.7
J05064-1|AAA51860.1| 934|Homo sapiens C6 protein. 29 8.7
J05024-1|AAA59668.1| 934|Homo sapiens completement component C6... 29 8.7
BC035723-1|AAH35723.1| 934|Homo sapiens C6 protein protein. 29 8.7
AL596210-1|CAI17064.1| 1673|Homo sapiens calmodulin binding tran... 29 8.7
AL590128-1|CAH72347.1| 1673|Homo sapiens calmodulin binding tran... 29 8.7
AL365194-1|CAI21790.1| 1673|Homo sapiens calmodulin binding tran... 29 8.7
AL359881-1|CAH72663.1| 1673|Homo sapiens calmodulin binding tran... 29 8.7
AB126592-1|BAD02321.1| 934|Homo sapiens complement component 6 ... 29 8.7
AB020640-1|BAA74856.3| 1734|Homo sapiens KIAA0833 protein protein. 29 8.7
>BC116457-1|AAI16458.1| 80|Homo sapiens CAMTA1 protein protein.
Length = 80
Score = 30.7 bits (66), Expect = 3.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 16 LPRAEHFAAQRHRWNTNEMS 75
LP+ +RHRWNTNE S
Sbjct: 61 LPKCSSLPKERHRWNTNERS 80
>Z98884-1|CAI21433.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.5 bits (63), Expect = 8.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 16 LPRAEHFAAQRHRWNTNE 69
LP+ +RHRWNTNE
Sbjct: 61 LPKCSSLPKERHRWNTNE 78
>Z98052-1|CAI21596.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.5 bits (63), Expect = 8.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 16 LPRAEHFAAQRHRWNTNE 69
LP+ +RHRWNTNE
Sbjct: 61 LPKCSSLPKERHRWNTNE 78
>Z97635-1|CAI20961.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.5 bits (63), Expect = 8.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 16 LPRAEHFAAQRHRWNTNE 69
LP+ +RHRWNTNE
Sbjct: 61 LPKCSSLPKERHRWNTNE 78
>X72177-1|CAA50994.1| 934|Homo sapiens complement component C6
protein.
Length = 934
Score = 29.5 bits (63), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 405 GLERDRARVNAWNSNACAWYTCYRAARASAMSS 503
GLER R N+ +C + TCY + SA +S
Sbjct: 846 GLERTRLSSNSTKKESCGYDTCYDWEKCSASTS 878
>J05064-1|AAA51860.1| 934|Homo sapiens C6 protein.
Length = 934
Score = 29.5 bits (63), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 405 GLERDRARVNAWNSNACAWYTCYRAARASAMSS 503
GLER R N+ +C + TCY + SA +S
Sbjct: 846 GLERTRLSSNSTKKESCGYDTCYDWEKCSASTS 878
>J05024-1|AAA59668.1| 934|Homo sapiens completement component C6
protein.
Length = 934
Score = 29.5 bits (63), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 405 GLERDRARVNAWNSNACAWYTCYRAARASAMSS 503
GLER R N+ +C + TCY + SA +S
Sbjct: 846 GLERTRLSSNSTKKESCGYDTCYDWEKCSASTS 878
>BC035723-1|AAH35723.1| 934|Homo sapiens C6 protein protein.
Length = 934
Score = 29.5 bits (63), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 405 GLERDRARVNAWNSNACAWYTCYRAARASAMSS 503
GLER R N+ +C + TCY + SA +S
Sbjct: 846 GLERTRLSSNSTKKESCGYDTCYDWEKCSASTS 878
>AL596210-1|CAI17064.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.5 bits (63), Expect = 8.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 16 LPRAEHFAAQRHRWNTNE 69
LP+ +RHRWNTNE
Sbjct: 61 LPKCSSLPKERHRWNTNE 78
>AL590128-1|CAH72347.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.5 bits (63), Expect = 8.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 16 LPRAEHFAAQRHRWNTNE 69
LP+ +RHRWNTNE
Sbjct: 61 LPKCSSLPKERHRWNTNE 78
>AL365194-1|CAI21790.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.5 bits (63), Expect = 8.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 16 LPRAEHFAAQRHRWNTNE 69
LP+ +RHRWNTNE
Sbjct: 61 LPKCSSLPKERHRWNTNE 78
>AL359881-1|CAH72663.1| 1673|Homo sapiens calmodulin binding
transcription activator 1 protein.
Length = 1673
Score = 29.5 bits (63), Expect = 8.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 16 LPRAEHFAAQRHRWNTNE 69
LP+ +RHRWNTNE
Sbjct: 61 LPKCSSLPKERHRWNTNE 78
>AB126592-1|BAD02321.1| 934|Homo sapiens complement component 6
protein.
Length = 934
Score = 29.5 bits (63), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 405 GLERDRARVNAWNSNACAWYTCYRAARASAMSS 503
GLER R N+ +C + TCY + SA +S
Sbjct: 846 GLERTRLSSNSTKKESCGYDTCYDWEKCSASTS 878
>AB020640-1|BAA74856.3| 1734|Homo sapiens KIAA0833 protein protein.
Length = 1734
Score = 29.5 bits (63), Expect = 8.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 16 LPRAEHFAAQRHRWNTNE 69
LP+ +RHRWNTNE
Sbjct: 122 LPKCSSLPKERHRWNTNE 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,738,839
Number of Sequences: 237096
Number of extensions: 1975057
Number of successful extensions: 4422
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4422
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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