Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0963
         (569 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    39   0.004
BT010078-1|AAQ22547.1|  678|Drosophila melanogaster LD09850p pro...    33   0.27 
AE014134-3246|AAG22447.2|  678|Drosophila melanogaster CG2508-PA...    33   0.27 
BT010281-1|AAQ23599.1|  859|Drosophila melanogaster RE05272p pro...    29   5.8  
AE014298-1150|ABC67177.1|  859|Drosophila melanogaster CG32717-P...    29   5.8  
AE014298-1147|ABI30970.1|  934|Drosophila melanogaster CG32717-P...    29   5.8  

>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
           calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +1

Query: 13  SLPRAEHFAAQRHRWNTNE 69
           SLPRA+ F +QRHRWNTNE
Sbjct: 424 SLPRADSFPSQRHRWNTNE 442


>BT010078-1|AAQ22547.1|  678|Drosophila melanogaster LD09850p
           protein.
          Length = 678

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = -1

Query: 488 RSRCPVTGIPRTCVRVPRINSRSVSF*SMVALNV*RNLVESRIRSFTSKKHMYVCASHT 312
           R R P+T I  T      + + S S  S+++L   RNL++   RS +S+  +   AS T
Sbjct: 574 RVRVPITSIATTTTSTTTVAAESASSSSLISLRPDRNLIQGMRRSQSSRTSLTAPASGT 632


>AE014134-3246|AAG22447.2|  678|Drosophila melanogaster CG2508-PA
           protein.
          Length = 678

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = -1

Query: 488 RSRCPVTGIPRTCVRVPRINSRSVSF*SMVALNV*RNLVESRIRSFTSKKHMYVCASHT 312
           R R P+T I  T      + + S S  S+++L   RNL++   RS +S+  +   AS T
Sbjct: 574 RVRVPITSIATTTTSTTTVAAESASSSSLISLRPDRNLIQGMRRSQSSRTSLTAPASGT 632


>BT010281-1|AAQ23599.1|  859|Drosophila melanogaster RE05272p
           protein.
          Length = 859

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 292 KNKTNRKGQPPTTPQCNGAASPWGYPHD 209
           +NKT  +  PP  PQ NG A P   P D
Sbjct: 28  RNKTPPRYPPPRPPQLNGNAKPVPPPRD 55


>AE014298-1150|ABC67177.1|  859|Drosophila melanogaster CG32717-PF,
           isoform F protein.
          Length = 859

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 292 KNKTNRKGQPPTTPQCNGAASPWGYPHD 209
           +NKT  +  PP  PQ NG A P   P D
Sbjct: 28  RNKTPPRYPPPRPPQLNGNAKPVPPPRD 55


>AE014298-1147|ABI30970.1|  934|Drosophila melanogaster CG32717-PH,
           isoform H protein.
          Length = 934

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 292 KNKTNRKGQPPTTPQCNGAASPWGYPHD 209
           +NKT  +  PP  PQ NG A P   P D
Sbjct: 103 RNKTPPRYPPPRPPQLNGNAKPVPPPRD 130


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,912,852
Number of Sequences: 53049
Number of extensions: 587067
Number of successful extensions: 1620
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)