Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0953
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC099916-1|AAH99916.2| 677|Homo sapiens RNA binding motif prote... 69 2e-11
BC067098-1|AAH67098.2| 681|Homo sapiens RNA binding motif prote... 66 7e-11
BC019932-1|AAH19932.1| 656|Homo sapiens RBM35A protein protein. 66 7e-11
BC112043-1|AAI12044.1| 392|Homo sapiens RBM35A protein protein. 64 4e-10
BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif prote... 56 1e-07
AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA. prot... 56 1e-07
U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein. 39 0.012
BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear r... 39 0.012
BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear r... 39 0.012
AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear r... 39 0.012
L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein. 39 0.016
CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein. 39 0.016
BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein. 39 0.016
AK000178-1|BAA90992.1| 358|Homo sapiens protein ( Homo sapiens ... 35 0.27
U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1 ... 34 0.47
BC040485-1|AAH40485.1| 435|Homo sapiens GRSF1 protein protein. 34 0.47
AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens ... 34 0.47
AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens ... 34 0.47
AC021989-1|AAY40942.1| 435|Homo sapiens unknown protein. 34 0.47
Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V) pr... 32 1.4
J04478-1|AAA51859.1| 463|Homo sapiens COL5A2 protein. 32 1.4
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 32 1.4
BC086874-1|AAH86874.1| 1139|Homo sapiens COL5A2 protein protein. 32 1.4
AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen a... 32 1.4
AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen... 32 1.4
BC007203-1|AAH07203.1| 390|Homo sapiens Ras association (RalGDS... 32 1.9
BC004270-1|AAH04270.1| 390|Homo sapiens Ras association (RalGDS... 32 1.9
AY062003-1|AAL40389.1| 336|Homo sapiens putative tumor suppress... 32 1.9
AY062002-1|AAL40388.1| 418|Homo sapiens putative tumor suppress... 32 1.9
AL591846-6|CAI13538.1| 392|Homo sapiens Ras association (RalGDS... 32 1.9
AL591846-5|CAI13537.1| 418|Homo sapiens Ras association (RalGDS... 32 1.9
AL591846-4|CAI13536.1| 336|Homo sapiens Ras association (RalGDS... 32 1.9
AL354681-5|CAI15254.1| 392|Homo sapiens Ras association (RalGDS... 32 1.9
AL354681-4|CAI15253.1| 418|Homo sapiens Ras association (RalGDS... 32 1.9
AL354681-3|CAI15252.1| 336|Homo sapiens Ras association (RalGDS... 32 1.9
AB209145-1|BAD92382.1| 352|Homo sapiens Ras association (RalGDS... 32 1.9
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 2.5
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 31 2.5
AK025901-1|BAB15275.1| 185|Homo sapiens protein ( Homo sapiens ... 31 2.5
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 31 2.5
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 31 2.5
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 31 2.5
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 31 2.5
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 31 3.3
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 31 3.3
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 31 3.3
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 31 3.3
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 31 3.3
BC068012-1|AAH68012.1| 1098|Homo sapiens ATXN2L protein protein. 31 4.3
AK097437-1|BAC05053.1| 260|Homo sapiens protein ( Homo sapiens ... 31 4.3
AL713647-1|CAD28458.1| 1232|Homo sapiens hypothetical protein pr... 30 5.7
AF376802-1|AAM46111.1| 835|Homo sapiens neuroligin 2 protein. 30 5.7
AB037787-1|BAA92604.1| 550|Homo sapiens KIAA1366 protein protein. 30 5.7
L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein. 30 7.6
DQ124707-1|AAZ38821.1| 578|Homo sapiens modulator of Na,K-ATPas... 30 7.6
BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein. 30 7.6
BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein. 30 7.6
BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein. 30 7.6
BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear r... 30 7.6
BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear r... 30 7.6
AY847222-1|AAX73354.1| 352|Homo sapiens PX serine/threonine kin... 30 7.6
AY847221-1|AAX73353.1| 441|Homo sapiens PX serine/threonine kin... 30 7.6
AY847220-1|AAX73352.1| 495|Homo sapiens PX serine/threonine kin... 30 7.6
AY437879-1|AAR98521.1| 545|Homo sapiens PX ser/thr kinase v2 pr... 30 7.6
AY274811-1|AAP42076.1| 578|Homo sapiens PX serine/threonine kin... 30 7.6
AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear r... 30 7.6
AK000342-1|BAA91097.1| 649|Homo sapiens protein ( Homo sapiens ... 30 7.6
>BC099916-1|AAH99916.2| 677|Homo sapiens RNA binding motif protein
35A protein.
Length = 677
Score = 68.5 bits (160), Expect = 2e-11
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGV---T 190
G PSG+AFIQM S AF+ AQ+ H + M K RY+EVFQCS ++MN VL GG
Sbjct: 485 GRPSGDAFIQMKSADRAFMAAQKCHKKNM----KDRYVEVFQCSAEEMNFVLMGGTLNRN 540
Query: 191 PATSPKVLSPGPLTYYYSAMGPTLPPPPLVY 283
+ P LSP +Y + A +P +Y
Sbjct: 541 GLSPPPCLSPP--SYTFPAPAAVIPTEAAIY 569
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 190
G +GEA ++ SE L Q+ H T RYIEV++ +G+D + + GG +
Sbjct: 263 GRRNGEALVRFVSEEHRDLALQRHKHHMGT-----RYIEVYKATGEDF-LKIAGGTS 313
>BC067098-1|AAH67098.2| 681|Homo sapiens RNA binding motif protein
35A protein.
Length = 681
Score = 66.5 bits (155), Expect = 7e-11
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGV--TP 193
G PSG+AFIQM S AF+ AQ+ H + M K RY+EVFQCS ++MN VL GG
Sbjct: 485 GRPSGDAFIQMKSADRAFMAAQKCHKKNM----KDRYVEVFQCSAEEMNFVLMGGTLNRN 540
Query: 194 ATSP---KVLSPGPLTYYYSAMGPTLPPPPLVY 283
SP K+ P +Y + A +P +Y
Sbjct: 541 GLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 190
G +GEA ++ SE L Q+ H T RYIEV++ +G+D + + GG +
Sbjct: 263 GRRNGEALVRFVSEEHRDLALQRHKHHMGT-----RYIEVYKATGEDF-LKIAGGTS 313
>BC019932-1|AAH19932.1| 656|Homo sapiens RBM35A protein protein.
Length = 656
Score = 66.5 bits (155), Expect = 7e-11
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGV--TP 193
G PSG+AFIQM S AF+ AQ+ H + M K RY+EVFQCS ++MN VL GG
Sbjct: 533 GRPSGDAFIQMKSADRAFMAAQKCHKKNM----KDRYVEVFQCSAEEMNFVLMGGTLNRN 588
Query: 194 ATSP---KVLSPGPLTYYYSAMGPTLPPPPLVY 283
SP K+ P +Y + A +P +Y
Sbjct: 589 GLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 621
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 190
G +GEA ++ SE L Q+ H T RYIEV++ +G+D + + GG +
Sbjct: 311 GRRNGEALVRFVSEEHRDLALQRHKHHMGT-----RYIEVYKATGEDF-LKIAGGTS 361
>BC112043-1|AAI12044.1| 392|Homo sapiens RBM35A protein protein.
Length = 392
Score = 64.1 bits (149), Expect = 4e-10
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGG 184
G PSG+AFIQM S AF+ AQ+ H + M K RY+EVFQCS ++MN VL GG
Sbjct: 332 GRPSGDAFIQMKSADRAFMAAQKCHKKNM----KDRYVEVFQCSAEEMNFVLMGG 382
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 190
G +GEA ++ SE L Q+ H T RYIEV++ +G+D + + GG +
Sbjct: 110 GRRNGEALVRFVSEEHRDLALQRHKHHMGT-----RYIEVYKATGEDF-LKIAGGTS 160
>BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif protein
35B protein.
Length = 717
Score = 55.6 bits (128), Expect = 1e-07
Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGV--TP 193
G PSG+AFIQM S A AQ+ H + M K+RY+EV CS ++M+ VL GG
Sbjct: 505 GRPSGDAFIQMTSAERALAAAQRCHKKVM----KERYVEVVPCSTEEMSRVLMGGTLGRS 560
Query: 194 ATSP---KVLSPGPLTYYYSAMGPTLPP 268
SP K+ P TY PTL P
Sbjct: 561 GMSPPPCKLPCLSPPTYTTFQATPTLIP 588
Score = 29.9 bits (64), Expect = 7.6
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 20 GHPSGEAFIQ-MDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 190
G +GEA I+ +DSE + KHH + RYIEV++ +G++ + + GG +
Sbjct: 285 GRRNGEALIRFVDSEQRDLALQRHKHHMGV------RYIEVYKATGEEF-VKIAGGTS 335
>AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA.
protein.
Length = 727
Score = 55.6 bits (128), Expect = 1e-07
Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGV--TP 193
G PSG+AFIQM S A AQ+ H + M K+RY+EV CS ++M+ VL GG
Sbjct: 515 GRPSGDAFIQMTSAERALAAAQRCHKKVM----KERYVEVVPCSTEEMSRVLMGGTLGRS 570
Query: 194 ATSP---KVLSPGPLTYYYSAMGPTLPP 268
SP K+ P TY PTL P
Sbjct: 571 GMSPPPCKLPCLSPPTYTTFQATPTLIP 598
Score = 29.9 bits (64), Expect = 7.6
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 20 GHPSGEAFIQ-MDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 190
G +GEA I+ +DSE + KHH + RYIEV++ +G++ + + GG +
Sbjct: 295 GRRNGEALIRFVDSEQRDLALQRHKHHMGV------RYIEVYKATGEEF-VKIAGGTS 345
>U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein.
Length = 449
Score = 39.1 bits (87), Expect = 0.012
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTP 193
G PSGEAF++++SE L ++ T G RY+EVF+ + +M+ VL TG +P
Sbjct: 51 GRPSGEAFVELESEEEVKLALKKDRE---TMG--HRYVEVFKSNSVEMDWVLKHTGPNSP 105
Query: 194 ATS 202
T+
Sbjct: 106 DTA 108
>BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 39.1 bits (87), Expect = 0.012
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTP 193
G PSGEAF++++SE L ++ T G RY+EVF+ + +M+ VL TG +P
Sbjct: 51 GRPSGEAFVELESEEEVKLALKKDRE---TMG--HRYVEVFKSNSVEMDWVLKHTGPNSP 105
Query: 194 ATS 202
T+
Sbjct: 106 DTA 108
>BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 39.1 bits (87), Expect = 0.012
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTP 193
G PSGEAF++++SE L ++ T G RY+EVF+ + +M+ VL TG +P
Sbjct: 51 GRPSGEAFVELESEEEVKLALKKDRE---TMG--HRYVEVFKSNSVEMDWVLKHTGPNSP 105
Query: 194 ATS 202
T+
Sbjct: 106 DTA 108
>AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 39.1 bits (87), Expect = 0.012
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTP 193
G PSGEAF++++SE L ++ T G RY+EVF+ + +M+ VL TG +P
Sbjct: 51 GRPSGEAFVELESEEEVKLALKKDRE---TMG--HRYVEVFKSNSVEMDWVLKHTGPNSP 105
Query: 194 ATS 202
T+
Sbjct: 106 DTA 108
>L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein.
Length = 449
Score = 38.7 bits (86), Expect = 0.016
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTP 193
G PSGEAF++++SE L ++ T G RY+EVF+ + +M+ VL TG +P
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRE---TMG--HRYVEVFKSNNVEMDWVLKHTGPNSP 105
Query: 194 ATS 202
T+
Sbjct: 106 DTA 108
>CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein.
Length = 449
Score = 38.7 bits (86), Expect = 0.016
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTP 193
G PSGEAF++++SE L ++ T G RY+EVF+ + +M+ VL TG +P
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRE---TMG--HRYVEVFKSNNVEMDWVLKHTGPNSP 105
Query: 194 ATS 202
T+
Sbjct: 106 DTA 108
>BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein.
Length = 449
Score = 38.7 bits (86), Expect = 0.016
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTP 193
G PSGEAF++++SE L ++ T G RY+EVF+ + +M+ VL TG +P
Sbjct: 51 GRPSGEAFVELESEDEVKLALKKDRE---TMG--HRYVEVFKSNNVEMDWVLKHTGPNSP 105
Query: 194 ATS 202
T+
Sbjct: 106 DTA 108
>AK000178-1|BAA90992.1| 358|Homo sapiens protein ( Homo sapiens
cDNA FLJ20171 fis, clone COL09761. ).
Length = 358
Score = 34.7 bits (76), Expect = 0.27
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHR 100
G PSG+AFIQM S AF+ AQ+ H +
Sbjct: 325 GRPSGDAFIQMKSADRAFMAAQKCHKK 351
Score = 31.9 bits (69), Expect = 1.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 190
G +GEA ++ SE L Q+ H T RYIEV++ +G+D + + GG +
Sbjct: 103 GRRNGEALVRFVSEEHRDLALQRHKHHMGT-----RYIEVYKATGEDF-LKIAGGTS 153
>U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1
protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.47
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G G+A I+M+SE A +KH YM QRY+EV++ + +D++ ++
Sbjct: 134 GKRRGDALIEMESEQDVQK-ALEKHRMYMG----QRYVEVYEINNEDVDALM 180
>BC040485-1|AAH40485.1| 435|Homo sapiens GRSF1 protein protein.
Length = 435
Score = 33.9 bits (74), Expect = 0.47
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G G+A I+M+SE A +KH YM QRY+EV++ + +D++ ++
Sbjct: 190 GKRRGDALIEMESEQDVQK-ALEKHRMYMG----QRYVEVYEINNEDVDALM 236
>AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens
cDNA FLJ45225 fis, clone BRCAN2020331, highly similar
to G-rich sequence factor-1. ).
Length = 447
Score = 33.9 bits (74), Expect = 0.47
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G G+A I+M+SE A +KH YM QRY+EV++ + +D++ ++
Sbjct: 157 GKRRGDALIEMESEQDVQK-ALEKHRMYMG----QRYVEVYEINNEDVDALM 203
>AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ33436 fis, clone BRACE2021478, highly similar to
G-RICH SEQUENCE FACTOR-1. ).
Length = 415
Score = 33.9 bits (74), Expect = 0.47
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G G+A I+M+SE A +KH YM QRY+EV++ + +D++ ++
Sbjct: 125 GKRRGDALIEMESEQDVQK-ALEKHRMYMG----QRYVEVYEINNEDVDALM 171
>AC021989-1|AAY40942.1| 435|Homo sapiens unknown protein.
Length = 435
Score = 33.9 bits (74), Expect = 0.47
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G G+A I+M+SE A +KH YM QRY+EV++ + +D++ ++
Sbjct: 190 GKRRGDALIEMESEQDVQK-ALEKHRMYMG----QRYVEVYEINNEDVDALM 236
>Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V)
protein.
Length = 1496
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -2
Query: 341 DGVEGGNSEQGRLGVSGSPNIRAAGVAASVPLLNSNKSKDRGTTPSGT--SPGSRRPLAP 168
DG G N G +G +GSP R A +P L ++ P G +PGS+ P
Sbjct: 266 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGP 325
>J04478-1|AAA51859.1| 463|Homo sapiens COL5A2 protein.
Length = 463
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -2
Query: 341 DGVEGGNSEQGRLGVSGSPNIRAAGVAASVPLLNSNKSKDRGTTPSGT--SPGSRRPLAP 168
DG G N G +G +GSP R A +P L ++ P G +PGS+ P
Sbjct: 266 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGP 325
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 32.3 bits (70), Expect = 1.4
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -2
Query: 362 LPASWFADGVEGGNSEQGRLGVSGSPNIRAAGVAASVPLLNSNKSKDRGTTPSGT--SPG 189
LP + A G++GG QG G GSP R + A L P+G +PG
Sbjct: 1034 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLRGRPGPQGPPGPAGEKGAPG 1093
Query: 188 SRRPLAP 168
+ P P
Sbjct: 1094 EKGPQGP 1100
>BC086874-1|AAH86874.1| 1139|Homo sapiens COL5A2 protein protein.
Length = 1139
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -2
Query: 341 DGVEGGNSEQGRLGVSGSPNIRAAGVAASVPLLNSNKSKDRGTTPSGT--SPGSRRPLAP 168
DG G N G +G +GSP R A +P L ++ P G +PGS+ P
Sbjct: 83 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGP 142
>AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen
alpha 2 chain protein.
Length = 1347
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -2
Query: 341 DGVEGGNSEQGRLGVSGSPNIRAAGVAASVPLLNSNKSKDRGTTPSGT--SPGSRRPLAP 168
DG G N G +G +GSP R A +P L ++ P G +PGS+ P
Sbjct: 114 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGP 173
>AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen
preproprotein variant protein.
Length = 1502
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -2
Query: 341 DGVEGGNSEQGRLGVSGSPNIRAAGVAASVPLLNSNKSKDRGTTPSGT--SPGSRRPLAP 168
DG G N G +G +GSP R A +P L ++ P G +PGS+ P
Sbjct: 269 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGP 328
>BC007203-1|AAH07203.1| 390|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 390
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 203 PKVLSPGPLTYYYSAMGPTLPPPP 274
P +L P P Y S GP LPPPP
Sbjct: 12 PLLLDPEPPRYLQSLSGPELPPPP 35
>BC004270-1|AAH04270.1| 390|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 390
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 203 PKVLSPGPLTYYYSAMGPTLPPPP 274
P +L P P Y S GP LPPPP
Sbjct: 12 PLLLDPEPPRYLQSLSGPELPPPP 35
>AY062003-1|AAL40389.1| 336|Homo sapiens putative tumor suppressor
RASSF3 isoform B protein.
Length = 336
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 203 PKVLSPGPLTYYYSAMGPTLPPPP 274
P +L P P Y S GP LPPPP
Sbjct: 14 PLLLDPEPPRYLQSLSGPELPPPP 37
>AY062002-1|AAL40388.1| 418|Homo sapiens putative tumor suppressor
RASSF3 isoform A protein.
Length = 418
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 203 PKVLSPGPLTYYYSAMGPTLPPPP 274
P +L P P Y S GP LPPPP
Sbjct: 14 PLLLDPEPPRYLQSLSGPELPPPP 37
>AL591846-6|CAI13538.1| 392|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 392
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 203 PKVLSPGPLTYYYSAMGPTLPPPP 274
P +L P P Y S GP LPPPP
Sbjct: 14 PLLLDPEPPRYLQSLSGPELPPPP 37
>AL591846-5|CAI13537.1| 418|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 418
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 203 PKVLSPGPLTYYYSAMGPTLPPPP 274
P +L P P Y S GP LPPPP
Sbjct: 14 PLLLDPEPPRYLQSLSGPELPPPP 37
>AL591846-4|CAI13536.1| 336|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 336
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 203 PKVLSPGPLTYYYSAMGPTLPPPP 274
P +L P P Y S GP LPPPP
Sbjct: 14 PLLLDPEPPRYLQSLSGPELPPPP 37
>AL354681-5|CAI15254.1| 392|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 392
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 203 PKVLSPGPLTYYYSAMGPTLPPPP 274
P +L P P Y S GP LPPPP
Sbjct: 14 PLLLDPEPPRYLQSLSGPELPPPP 37
>AL354681-4|CAI15253.1| 418|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 418
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 203 PKVLSPGPLTYYYSAMGPTLPPPP 274
P +L P P Y S GP LPPPP
Sbjct: 14 PLLLDPEPPRYLQSLSGPELPPPP 37
>AL354681-3|CAI15252.1| 336|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 protein.
Length = 336
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 203 PKVLSPGPLTYYYSAMGPTLPPPP 274
P +L P P Y S GP LPPPP
Sbjct: 14 PLLLDPEPPRYLQSLSGPELPPPP 37
>AB209145-1|BAD92382.1| 352|Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 isoform B variant protein.
Length = 352
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 203 PKVLSPGPLTYYYSAMGPTLPPPP 274
P +L P P Y S GP LPPPP
Sbjct: 16 PLLLDPEPPRYLQSLSGPELPPPP 39
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 31.5 bits (68), Expect = 2.5
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 362 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGVAASVPLL-NSNKSKDRGTTPSGTSPG 189
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 918 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 977
Query: 188 SRRPLAP 168
+ P P
Sbjct: 978 EKGPQGP 984
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 31.5 bits (68), Expect = 2.5
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 362 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGVAASVPLL-NSNKSKDRGTTPSGTSPG 189
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 1034 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 1093
Query: 188 SRRPLAP 168
+ P P
Sbjct: 1094 EKGPQGP 1100
>AK025901-1|BAB15275.1| 185|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22248 fis, clone HRC02668. ).
Length = 185
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 119 KQRYIEVFQCSGDDMNMVLTGG 184
K+RY+EV CS ++M+ VL GG
Sbjct: 2 KERYVEVVPCSTEEMSRVLMGG 23
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 31.5 bits (68), Expect = 2.5
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 362 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGVAASVPLL-NSNKSKDRGTTPSGTSPG 189
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 995 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 1054
Query: 188 SRRPLAP 168
+ P P
Sbjct: 1055 EKGPQGP 1061
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 31.5 bits (68), Expect = 2.5
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 362 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGVAASVPLL-NSNKSKDRGTTPSGTSPG 189
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 1046 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 1105
Query: 188 SRRPLAP 168
+ P P
Sbjct: 1106 EKGPQGP 1112
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 31.5 bits (68), Expect = 2.5
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 362 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGVAASVPLL-NSNKSKDRGTTPSGTSPG 189
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 1034 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 1093
Query: 188 SRRPLAP 168
+ P P
Sbjct: 1094 EKGPQGP 1100
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 31.5 bits (68), Expect = 2.5
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 362 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGVAASVPLL-NSNKSKDRGTTPSGTSPG 189
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 245 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 304
Query: 188 SRRPLAP 168
+ P P
Sbjct: 305 EKGPQGP 311
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 344 ADGVEGGNSEQGRLGVSGSPNIRAAGVAASVPLLNSNKSKDRGTTPSGTSPGS 186
A G+ GG E G+ G G P R A +P + K +D G S PG+
Sbjct: 277 APGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGED-GKDGSPGDPGA 328
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
collagen protein.
Length = 1466
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 344 ADGVEGGNSEQGRLGVSGSPNIRAAGVAASVPLLNSNKSKDRGTTPSGTSPGS 186
A G+ GG E G+ G G P R A +P + K +D G S PG+
Sbjct: 424 APGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGED-GKDGSPGEPGA 475
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 344 ADGVEGGNSEQGRLGVSGSPNIRAAGVAASVPLLNSNKSKDRGTTPSGTSPGS 186
A G+ GG E G+ G G P R A +P + K +D G S PG+
Sbjct: 424 APGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGED-GKDGSPGEPGA 475
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 344 ADGVEGGNSEQGRLGVSGSPNIRAAGVAASVPLLNSNKSKDRGTTPSGTSPGS 186
A G+ GG E G+ G G P R A +P + K +D G S PG+
Sbjct: 424 APGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGED-GKDGSPGEPGA 475
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 344 ADGVEGGNSEQGRLGVSGSPNIRAAGVAASVPLLNSNKSKDRGTTPSGTSPGS 186
A G+ GG E G+ G G P R A +P + K +D G S PG+
Sbjct: 424 APGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGED-GKDGSPGEPGA 475
>BC068012-1|AAH68012.1| 1098|Homo sapiens ATXN2L protein protein.
Length = 1098
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = -2
Query: 293 GSPNIRAAGVAASVPLLNSNKSKDRGTTPSGTSPG--SRRPLAPCSCRRLNTGTPRCTVV 120
GSP AG +PL ++++ RG +P SP S P C + T
Sbjct: 18 GSPRPPTAGPGCPIPL--ASRALQRGPSPGPLSPSLLSNSPSGRCHHVEASAATTALPAP 75
Query: 119 SSRRSCTGDASAGHRGKR 66
++ C G +A G R
Sbjct: 76 AAASPCLGPVAAAGSGLR 93
>AK097437-1|BAC05053.1| 260|Homo sapiens protein ( Homo sapiens
cDNA FLJ40118 fis, clone TESTI2009412. ).
Length = 260
Score = 30.7 bits (66), Expect = 4.3
Identities = 22/89 (24%), Positives = 35/89 (39%)
Frame = +2
Query: 14 CPGHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVTP 193
C G A M + A+ L + +T ++R ++ + +D+ P
Sbjct: 100 CRVETGGPAAASMSASAAVLLVSTTPAMARLTLPSRERLMDALETCSEDLP------AAP 153
Query: 194 ATSPKVLSPGPLTYYYSAMGPTLPPPPLV 280
AT+ VL L AM P PP P+V
Sbjct: 154 ATATFVLFGAMLAVPARAMLPLFPPAPMV 182
>AL713647-1|CAD28458.1| 1232|Homo sapiens hypothetical protein
protein.
Length = 1232
Score = 30.3 bits (65), Expect = 5.7
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2
Query: 356 ASWFADGVEGGNSEQGRLGVSGS 288
A W +GVE NSE+ R GVSGS
Sbjct: 877 AKWVLNGVELTNSEEYRYGVSGS 899
>AF376802-1|AAM46111.1| 835|Homo sapiens neuroligin 2 protein.
Length = 835
Score = 30.3 bits (65), Expect = 5.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 209 VLSPGPLTYYYSAMGPTLPPPP 274
+L+PG LT S +GP PPPP
Sbjct: 782 LLAPGALTLLPSGLGPPPPPPP 803
>AB037787-1|BAA92604.1| 550|Homo sapiens KIAA1366 protein protein.
Length = 550
Score = 30.3 bits (65), Expect = 5.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 209 VLSPGPLTYYYSAMGPTLPPPP 274
+L+PG LT S +GP PPPP
Sbjct: 497 LLAPGALTLLPSGLGPPPPPPP 518
>L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein.
Length = 415
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G SGEAF+++ SE + A +K M RYIEVF+ +M+ VL
Sbjct: 51 GRQSGEAFVELGSEDDVKM-ALKKDRESM----GHRYIEVFKSHRTEMDWVL 97
>DQ124707-1|AAZ38821.1| 578|Homo sapiens modulator of Na,K-ATPase
long form protein.
Length = 578
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 164 NMVLTGGVTPATSPKVLSPGPLTYYYSAMGPTLPPPP 274
N +G +P TSP +P P T SA+ P PPPP
Sbjct: 487 NSAGSGASSPLTSPSSPTP-PSTSGISALPPPPPPPP 522
>BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G SGEAF+++ SE + A +K M RYIEVF+ +M+ VL
Sbjct: 51 GRQSGEAFVELGSEDDVKM-ALKKDRESM----GHRYIEVFKSHRTEMDWVL 97
>BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G SGEAF+++ SE + A +K M RYIEVF+ +M+ VL
Sbjct: 51 GRQSGEAFVELGSEDDVKM-ALKKDRESM----GHRYIEVFRSHRTEMDWVL 97
>BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G SGEAF+++ SE + A +K M RYIEVF+ +M+ VL
Sbjct: 51 GRQSGEAFVELGSEDDVKM-ALKKDRESM----GHRYIEVFKSHRTEMDWVL 97
>BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G SGEAF+++ SE + A +K M RYIEVF+ +M+ VL
Sbjct: 51 GRQSGEAFVELGSEDDVKM-ALKKDRESM----GHRYIEVFKSHRTEMDWVL 97
>BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G SGEAF+++ SE + A +K M RYIEVF+ +M+ VL
Sbjct: 51 GRQSGEAFVELGSEDDVKM-ALKKDRESM----GHRYIEVFKSHRTEMDWVL 97
>AY847222-1|AAX73354.1| 352|Homo sapiens PX serine/threonine kinase
isoform 3 protein.
Length = 352
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 164 NMVLTGGVTPATSPKVLSPGPLTYYYSAMGPTLPPPP 274
N +G +P TSP +P P T SA+ P PPPP
Sbjct: 261 NSAGSGASSPLTSPSSPTP-PSTSGISALPPPPPPPP 296
>AY847221-1|AAX73353.1| 441|Homo sapiens PX serine/threonine kinase
isoform 4 protein.
Length = 441
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 164 NMVLTGGVTPATSPKVLSPGPLTYYYSAMGPTLPPPP 274
N +G +P TSP +P P T SA+ P PPPP
Sbjct: 350 NSAGSGASSPLTSPSSPTP-PSTSGISALPPPPPPPP 385
>AY847220-1|AAX73352.1| 495|Homo sapiens PX serine/threonine kinase
isoform 5 protein.
Length = 495
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 164 NMVLTGGVTPATSPKVLSPGPLTYYYSAMGPTLPPPP 274
N +G +P TSP +P P T SA+ P PPPP
Sbjct: 404 NSAGSGASSPLTSPSSPTP-PSTSGISALPPPPPPPP 439
>AY437879-1|AAR98521.1| 545|Homo sapiens PX ser/thr kinase v2
protein.
Length = 545
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 164 NMVLTGGVTPATSPKVLSPGPLTYYYSAMGPTLPPPP 274
N +G +P TSP +P P T SA+ P PPPP
Sbjct: 454 NSAGSGASSPLTSPSSPTP-PSTSGISALPPPPPPPP 489
>AY274811-1|AAP42076.1| 578|Homo sapiens PX serine/threonine kinase
protein.
Length = 578
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 164 NMVLTGGVTPATSPKVLSPGPLTYYYSAMGPTLPPPP 274
N +G +P TSP +P P T SA+ P PPPP
Sbjct: 487 NSAGSGASSPLTSPSSPTP-PSTSGISALPPPPPPPP 522
>AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 20 GHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 175
G SGEAF+++ SE + A +K M RYIEVF+ +M+ VL
Sbjct: 51 GRQSGEAFVELGSEDDVKM-ALKKDRESM----GHRYIEVFKSHRTEMDWVL 97
>AK000342-1|BAA91097.1| 649|Homo sapiens protein ( Homo sapiens
cDNA FLJ20335 fis, clone HEP11429. ).
Length = 649
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 164 NMVLTGGVTPATSPKVLSPGPLTYYYSAMGPTLPPPP 274
N +G +P TSP +P P T SA+ P PPPP
Sbjct: 487 NSAGSGASSPLTSPSSPTP-PSTSGISALPPPPPPPP 522
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,146,285
Number of Sequences: 237096
Number of extensions: 2340116
Number of successful extensions: 8562
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 7309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8516
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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