Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0950
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004225-1|AAH04225.1| 206|Homo sapiens N-acetyltransferase 9 p... 211 2e-54
AY632082-1|AAU25819.1| 206|Homo sapiens embryo brain specific p... 211 2e-54
BC004195-1|AAH04195.1| 207|Homo sapiens N-acetyltransferase 9 p... 207 3e-53
D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein. 30 6.1
BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type)... 30 6.1
BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type)... 30 6.1
BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type)... 30 6.1
>BC004225-1|AAH04225.1| 206|Homo sapiens N-acetyltransferase 9
protein.
Length = 206
Score = 211 bits (515), Expect = 2e-54
Identities = 106/198 (53%), Positives = 136/198 (68%), Gaps = 3/198 (1%)
Frame = +3
Query: 51 MKLNSHTKIVGANIILVPYKKHHVPVYHEWMKSEELQKLTASEPLNLEQEYEMQKTWHDD 230
M+LN +T ++G ++LVPY HVP YHEWMKSEELQ+LTASEPL LEQEY MQ +W +D
Sbjct: 1 MRLNQNTLLLGKKVVLVPYTSEHVPRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQED 60
Query: 231 EDKCTFIILDKDIFN-NTAFDETGAMIGDTNIFITD-KELAIGEIEIMIAEPSARGKKRG 404
DKCTFI+LD + + E M+GD N+F+TD ++L +GEIE+MIAEPS RGK G
Sbjct: 61 ADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGLG 120
Query: 405 WEAVKLMLLYGIKSIKIQTFEAKILLQNVISIKMFKKLGFQEKSVSAVFQEVTLDKKVSN 584
EAV ML YG+ ++ + FEAKI N SI+MF+KL F++ + S+VFQEVTL VS
Sbjct: 121 TEAVLAMLSYGVTTLGLTKFEAKIGQGNEPSIRMFQKLHFEQVATSSVFQEVTLRLTVSE 180
Query: 585 EWTEWLASSLS-FEIKDY 635
+WL S E K Y
Sbjct: 181 SEHQWLLEQTSHVEEKPY 198
>AY632082-1|AAU25819.1| 206|Homo sapiens embryo brain specific
protein protein.
Length = 206
Score = 211 bits (515), Expect = 2e-54
Identities = 106/198 (53%), Positives = 136/198 (68%), Gaps = 3/198 (1%)
Frame = +3
Query: 51 MKLNSHTKIVGANIILVPYKKHHVPVYHEWMKSEELQKLTASEPLNLEQEYEMQKTWHDD 230
M+LN +T ++G ++LVPY HVP YHEWMKSEELQ+LTASEPL LEQEY MQ +W +D
Sbjct: 1 MRLNQNTLLLGKKVVLVPYTSEHVPRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQED 60
Query: 231 EDKCTFIILDKDIFN-NTAFDETGAMIGDTNIFITD-KELAIGEIEIMIAEPSARGKKRG 404
DKCTFI+LD + + E M+GD N+F+TD ++L +GEIE+MIAEPS RGK G
Sbjct: 61 ADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGLG 120
Query: 405 WEAVKLMLLYGIKSIKIQTFEAKILLQNVISIKMFKKLGFQEKSVSAVFQEVTLDKKVSN 584
EAV ML YG+ ++ + FEAKI N SI+MF+KL F++ + S+VFQEVTL VS
Sbjct: 121 TEAVLAMLSYGVTTLGLTKFEAKIGQGNEPSIRMFQKLHFEQVATSSVFQEVTLRLTVSE 180
Query: 585 EWTEWLASSLS-FEIKDY 635
+WL S E K Y
Sbjct: 181 SEHQWLLEQTSHVEEKPY 198
>BC004195-1|AAH04195.1| 207|Homo sapiens N-acetyltransferase 9
protein.
Length = 207
Score = 207 bits (505), Expect = 3e-53
Identities = 107/199 (53%), Positives = 135/199 (67%), Gaps = 4/199 (2%)
Frame = +3
Query: 51 MKLNSHTKIVGANIILVPYKKHHVPV-YHEWMKSEELQKLTASEPLNLEQEYEMQKTWHD 227
M+LN +T ++G ++LVPY HVP YHEWMKSEELQ+LTASEPL LEQEY MQ +W +
Sbjct: 1 MRLNQNTLLLGKKVVLVPYTSEHVPSRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQE 60
Query: 228 DEDKCTFIILDKDIFN-NTAFDETGAMIGDTNIFITDKE-LAIGEIEIMIAEPSARGKKR 401
D DKCTFI+LD + + E M+GD N+F+TD E L +GEIE+MIAEPS RGK
Sbjct: 61 DADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGL 120
Query: 402 GWEAVKLMLLYGIKSIKIQTFEAKILLQNVISIKMFKKLGFQEKSVSAVFQEVTLDKKVS 581
G EAV ML YG+ ++ + FEAKI N SI+MF+KL F++ + S+VFQEVTL VS
Sbjct: 121 GTEAVLAMLSYGVTTLGLTKFEAKIGQGNEPSIRMFQKLHFEQVATSSVFQEVTLRLTVS 180
Query: 582 NEWTEWLASSLS-FEIKDY 635
+WL S E K Y
Sbjct: 181 ESEHQWLLEQTSHVEEKPY 199
>D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein.
Length = 482
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 144 KSEELQKLTASEPLNLEQEYEMQKTWHDDEDKCTFIILDKDIFNNTAFDETGA 302
K E LQK+ E E E TW + E F +++KD N + +TGA
Sbjct: 132 KEEALQKMLDQA----ENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGA 180
>BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 144 KSEELQKLTASEPLNLEQEYEMQKTWHDDEDKCTFIILDKDIFNNTAFDETGA 302
K E LQK+ E E E TW + E F +++KD N + +TGA
Sbjct: 132 KEEALQKMLDQA----ENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGA 180
>BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 144 KSEELQKLTASEPLNLEQEYEMQKTWHDDEDKCTFIILDKDIFNNTAFDETGA 302
K E LQK+ E E E TW + E F +++KD N + +TGA
Sbjct: 132 KEEALQKMLDQA----ENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGA 180
>BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 144 KSEELQKLTASEPLNLEQEYEMQKTWHDDEDKCTFIILDKDIFNNTAFDETGA 302
K E LQK+ E E E TW + E F +++KD N + +TGA
Sbjct: 132 KEEALQKMLDQA----ENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGA 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,251,318
Number of Sequences: 237096
Number of extensions: 1491604
Number of successful extensions: 3279
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3272
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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