Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0949
         (405 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p pro...   111   5e-25
AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p pro...   111   5e-25
AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA ...   111   5e-25
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    30   1.4  
AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA ...    29   2.4  
L27467-1|AAB59187.1| 1698|Drosophila melanogaster cora protein.        27   9.5  
BT024976-1|ABE01206.1|  703|Drosophila melanogaster IP14940p pro...    27   9.5  
AE013599-2841|AAM70846.1|  699|Drosophila melanogaster CG11949-P...    27   9.5  
AE013599-2840|AAF57592.1| 1698|Drosophila melanogaster CG11949-P...    27   9.5  
AE013599-2839|AAF57591.1|  889|Drosophila melanogaster CG11949-P...    27   9.5  
AE013599-2838|AAF57593.1|  703|Drosophila melanogaster CG11949-P...    27   9.5  

>AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p
           protein.
          Length = 157

 Score =  111 bits (266), Expect = 5e-25
 Identities = 54/92 (58%), Positives = 67/92 (72%)
 Frame = +3

Query: 129 PAAPVEPTKVLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYA 308
           PAA     KV  K  K RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY 
Sbjct: 32  PAA--SEAKVSAKKYK-RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYV 88

Query: 309 GKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWG 404
           GK CVYVY+A+ +  +P  P  +KT++RA+WG
Sbjct: 89  GKRCVYVYKAETKKCVPQHPE-RKTRVRAVWG 119


>AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p
           protein.
          Length = 157

 Score =  111 bits (266), Expect = 5e-25
 Identities = 54/92 (58%), Positives = 67/92 (72%)
 Frame = +3

Query: 129 PAAPVEPTKVLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYA 308
           PAA     KV  K  K RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY 
Sbjct: 32  PAA--SEAKVSAKKYK-RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYV 88

Query: 309 GKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWG 404
           GK CVYVY+A+ +  +P  P  +KT++RA+WG
Sbjct: 89  GKRCVYVYKAETKKCVPQHPE-RKTRVRAVWG 119


>AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA
           protein.
          Length = 157

 Score =  111 bits (266), Expect = 5e-25
 Identities = 54/92 (58%), Positives = 67/92 (72%)
 Frame = +3

Query: 129 PAAPVEPTKVLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYA 308
           PAA     KV  K  K RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY 
Sbjct: 32  PAA--SEAKVSAKKYK-RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYV 88

Query: 309 GKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWG 404
           GK CVYVY+A+ +  +P  P  +KT++RA+WG
Sbjct: 89  GKRCVYVYKAETKKCVPQHPE-RKTRVRAVWG 119


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 145  SPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTP 255
            SP+   +   +PAT+     P S  +S+  +TST TP
Sbjct: 959  SPEHRSSSQPTPATSSAGSIPSSVSVSISVSTSTHTP 995


>AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA
           protein.
          Length = 1504

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 145 SPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTP 255
           SP+   +   +PAT+     P S  +S+  +TST TP
Sbjct: 410 SPEHRSSSQPTPATSSAGSIPSSVSVSISVSTSTPTP 446


>L27467-1|AAB59187.1| 1698|Drosophila melanogaster cora protein.
          Length = 1698

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 123 SAPAAPVEPTKVLRKASKPRHGR 191
           SAPA P  PTK   K+S   HG+
Sbjct: 8   SAPAEPETPTKSKPKSSSSSHGK 30


>BT024976-1|ABE01206.1|  703|Drosophila melanogaster IP14940p
           protein.
          Length = 703

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 123 SAPAAPVEPTKVLRKASKPRHGR 191
           SAPA P  PTK   K+S   HG+
Sbjct: 8   SAPAEPETPTKSKPKSSSSSHGK 30


>AE013599-2841|AAM70846.1|  699|Drosophila melanogaster CG11949-PD,
           isoform D protein.
          Length = 699

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 123 SAPAAPVEPTKVLRKASKPRHGR 191
           SAPA P  PTK   K+S   HG+
Sbjct: 8   SAPAEPETPTKSKPKSSSSSHGK 30


>AE013599-2840|AAF57592.1| 1698|Drosophila melanogaster CG11949-PA,
           isoform A protein.
          Length = 1698

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 123 SAPAAPVEPTKVLRKASKPRHGR 191
           SAPA P  PTK   K+S   HG+
Sbjct: 8   SAPAEPETPTKSKPKSSSSSHGK 30


>AE013599-2839|AAF57591.1|  889|Drosophila melanogaster CG11949-PB,
           isoform B protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 123 SAPAAPVEPTKVLRKASKPRHGR 191
           SAPA P  PTK   K+S   HG+
Sbjct: 8   SAPAEPETPTKSKPKSSSSSHGK 30


>AE013599-2838|AAF57593.1|  703|Drosophila melanogaster CG11949-PC,
           isoform C protein.
          Length = 703

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 123 SAPAAPVEPTKVLRKASKPRHGR 191
           SAPA P  PTK   K+S   HG+
Sbjct: 8   SAPAEPETPTKSKPKSSSSSHGK 30


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,543,078
Number of Sequences: 53049
Number of extensions: 358458
Number of successful extensions: 1079
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)