Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0944
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80836-12|AAB37889.1|  187|Caenorhabditis elegans Dj-1 (mammalia...   157   8e-39
AF016418-9|AAK18904.1|  186|Caenorhabditis elegans Hypothetical ...   118   4e-27
AJ271466-1|CAB69047.1|  341|Caenorhabditis elegans fructose-1,6-...    29   2.0  
AC006670-1|AAF39910.1|  341|Caenorhabditis elegans Fructose-1,6-...    29   2.0  
Z92826-1|CAB07320.1|  263|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z78546-7|CAB01772.1|  375|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AL023830-4|CAA19474.1|  375|Caenorhabditis elegans Hypothetical ...    27   7.9  

>U80836-12|AAB37889.1|  187|Caenorhabditis elegans Dj-1 (mammalian
           transcriptionalregulator) related protein 1.1 protein.
          Length = 187

 Score =  157 bits (380), Expect = 8e-39
 Identities = 86/186 (46%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
 Frame = +1

Query: 34  KSALVILA-QGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 210
           KSAL+ILA +GAEEME +IT D+L RG + V  AGL+G+ PV C+R   +VPD  L +  
Sbjct: 4   KSALIILAAEGAEEMEVIITGDVLARGEIRVVYAGLDGAEPVKCARGAHIVPDVKLED-- 61

Query: 211 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 390
            E +++D VILPGG  GS++L++S  V  +LK   ++G               HGV +  
Sbjct: 62  VETEKFDIVILPGGQPGSNTLAESLLVRDVLKSQVESGGLIGAICAAPIALLSHGV-KAE 120

Query: 391 RVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQV 570
            VTS+PS ++KL  G Y Y E +RVVV G ++TSRGPGTA+ F L ++ELL GK+KA  +
Sbjct: 121 LVTSHPSVKEKLEKGGYKYSE-DRVVVSGKIITSRGPGTAFEFALKIVELLEGKDKATSL 179

Query: 571 EKGMLI 588
              ML+
Sbjct: 180 IAPMLL 185


>AF016418-9|AAK18904.1|  186|Caenorhabditis elegans Hypothetical
           protein C49G7.11 protein.
          Length = 186

 Score =  118 bits (283), Expect = 4e-27
 Identities = 65/188 (34%), Positives = 109/188 (57%), Gaps = 1/188 (0%)
 Frame = +1

Query: 34  KSALVILA-QGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 210
           KSAL++L  + AEE+E ++T D+L RGG+ V  AG   + PV C++   +VPD +L +  
Sbjct: 5   KSALILLPPEDAEEIEVIVTGDVLVRGGLQVLYAG-SSTEPVKCAKGARIVPDVALKDV- 62

Query: 211 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 390
            + + +D +I+PGG  G   L++   +G LLK    +G               HG+    
Sbjct: 63  -KNKTFDIIIIPGG-PGCSKLAECPVIGELLKTQVKSGGLIGAICAGPTVLLAHGIV-AE 119

Query: 391 RVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIELLTGKEKADQV 570
           RVT + + +DK++ G Y Y++ + VV+   V+TS+GPGTA+ F L ++E L G EK + +
Sbjct: 120 RVTCHYTVKDKMTEGGYKYLD-DNVVISDRVITSKGPGTAFEFALKIVETLEGPEKTNSL 178

Query: 571 EKGMLISQ 594
            K + +++
Sbjct: 179 LKPLCLAK 186


>AJ271466-1|CAB69047.1|  341|Caenorhabditis elegans
           fructose-1,6-bisphosphatase protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 28  MSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 162
           M KS+       +EE + +I V+  RRG   VT   L+GSS + C
Sbjct: 89  MLKSSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDC 133


>AC006670-1|AAF39910.1|  341|Caenorhabditis elegans
           Fructose-1,6-biphosphatase protein1 protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 28  MSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 162
           M KS+       +EE + +I V+  RRG   VT   L+GSS + C
Sbjct: 89  MLKSSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDC 133


>Z92826-1|CAB07320.1|  263|Caenorhabditis elegans Hypothetical
           protein C18D11.1 protein.
          Length = 263

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 409 WGMTSRAGPSPRRGLQTLW-EQHKWQQ*FSHY 317
           +G T    P P RG    + EQH+ QQ + HY
Sbjct: 224 YGETHAVAPPPHRGATDYYPEQHRPQQQYGHY 255


>Z78546-7|CAB01772.1|  375|Caenorhabditis elegans Hypothetical
           protein T21H8.4 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 523 LTLIELLTGKEKADQVEKGMLISQ 594
           L L+EL  GK++ D++ K M+ SQ
Sbjct: 288 LILVELWLGKKRQDRIHKDMMASQ 311


>AL023830-4|CAA19474.1|  375|Caenorhabditis elegans Hypothetical
           protein T21H8.4 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 523 LTLIELLTGKEKADQVEKGMLISQ 594
           L L+EL  GK++ D++ K M+ SQ
Sbjct: 288 LILVELWLGKKRQDRIHKDMMASQ 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,500,164
Number of Sequences: 27780
Number of extensions: 218522
Number of successful extensions: 555
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)