Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0938
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542055-1|CAG46852.1| 338|Homo sapiens PHYH protein. 139 7e-33
BC029512-1|AAH29512.1| 338|Homo sapiens phytanoyl-CoA 2-hydroxy... 139 9e-33
AL138764-5|CAI12911.2| 338|Homo sapiens phytanoyl-CoA 2-hydroxy... 139 9e-33
AF242386-1|AAF74123.1| 338|Homo sapiens phytanoyl-CoA hydroxyla... 139 9e-33
AF112977-1|AAD20602.1| 338|Homo sapiens phytanoil-CoA alpha hyd... 139 9e-33
AF023462-1|AAB81834.1| 338|Homo sapiens peroxisomal phytanoyl-C... 139 9e-33
AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA 2-hydroxy... 137 3e-32
AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA 2-hydroxy... 137 3e-32
BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein. 58 2e-08
AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygena... 58 2e-08
BC051300-1|AAH51300.1| 270|Homo sapiens PHYHD1 protein protein. 51 4e-06
AL672142-5|CAI10841.1| 255|Homo sapiens phytanoyl-CoA dioxygena... 51 4e-06
AL672142-4|CAI10840.1| 177|Homo sapiens phytanoyl-CoA dioxygena... 39 0.018
AY035864-1|AAK62026.1| 1709|Homo sapiens GW182 autoantigen protein. 32 1.6
AJ492221-1|CAD37348.1| 1962|Homo sapiens EDIE protein protein. 32 1.6
AB040893-1|BAA95984.1| 1400|Homo sapiens KIAA1460 protein protein. 32 1.6
AJ628420-1|CAF31524.1| 598|Homo sapiens type II hair keratin 4 ... 31 2.7
Y19209-1|CAB76829.1| 600|Homo sapiens type II hair keratin 3 pr... 31 3.6
BC069647-1|AAH69647.1| 600|Homo sapiens keratin 84 protein. 31 3.6
AY351902-1|AAQ81291.1| 1071|Homo sapiens testis specific IQ moti... 30 8.3
>CR542055-1|CAG46852.1| 338|Homo sapiens PHYH protein.
Length = 338
Score = 139 bits (337), Expect = 7e-33
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Frame = +1
Query: 121 NYRLSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQIC-KGIVDSPVMIVKEQALFEK 297
N L+ EQ+ FY ENG+LVIK L+ + ++ F +IC K + + ++++ + +
Sbjct: 50 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKS 109
Query: 298 NLKP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDDITAIHSMFINKPPG----T 462
P E+ I K+Q+ D Y P +L + F G +I A+H+M INKPP T
Sbjct: 110 EYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 463 ARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP--EA 636
+RHP HQDL YFP RP D I+ +WTA++H++++NGCL V+P +HK L PH D P E
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPDTHKGS-LKPH-DYPKWEG 227
Query: 637 G--KLYHG 654
G K++HG
Sbjct: 228 GVNKMFHG 235
>BC029512-1|AAH29512.1| 338|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 338
Score = 139 bits (336), Expect = 9e-33
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Frame = +1
Query: 121 NYRLSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQIC-KGIVDSPVMIVKEQALFEK 297
N L+ EQ+ FY ENG+LVIK L+ + ++ F +IC K + + ++++ + +
Sbjct: 50 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKS 109
Query: 298 NLKP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDDITAIHSMFINKPPG----T 462
P E+ I K+Q+ D Y P +L + F G +I A+H+M INKPP T
Sbjct: 110 EYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 463 ARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP--EA 636
+RHP HQDL YFP RP D I+ +WTA++H++++NGCL V+P +HK L PH D P E
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGS-LKPH-DYPKWEG 227
Query: 637 G--KLYHG 654
G K++HG
Sbjct: 228 GVNKMFHG 235
>AL138764-5|CAI12911.2| 338|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 338
Score = 139 bits (336), Expect = 9e-33
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Frame = +1
Query: 121 NYRLSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQIC-KGIVDSPVMIVKEQALFEK 297
N L+ EQ+ FY ENG+LVIK L+ + ++ F +IC K + + ++++ + +
Sbjct: 50 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKS 109
Query: 298 NLKP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDDITAIHSMFINKPPG----T 462
P E+ I K+Q+ D Y P +L + F G +I A+H+M INKPP T
Sbjct: 110 EYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 463 ARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP--EA 636
+RHP HQDL YFP RP D I+ +WTA++H++++NGCL V+P +HK L PH D P E
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGS-LKPH-DYPKWEG 227
Query: 637 G--KLYHG 654
G K++HG
Sbjct: 228 GVNKMFHG 235
>AF242386-1|AAF74123.1| 338|Homo sapiens phytanoyl-CoA hydroxylase
protein.
Length = 338
Score = 139 bits (336), Expect = 9e-33
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Frame = +1
Query: 121 NYRLSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQIC-KGIVDSPVMIVKEQALFEK 297
N L+ EQ+ FY ENG+LVIK L+ + ++ F +IC K + + ++++ + +
Sbjct: 50 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKS 109
Query: 298 NLKP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDDITAIHSMFINKPPG----T 462
P E+ I K+Q+ D Y P +L + F G +I A+H+M INKPP T
Sbjct: 110 EYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 463 ARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP--EA 636
+RHP HQDL YFP RP D I+ +WTA++H++++NGCL V+P +HK L PH D P E
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGS-LKPH-DYPKWEG 227
Query: 637 G--KLYHG 654
G K++HG
Sbjct: 228 GVNKMFHG 235
>AF112977-1|AAD20602.1| 338|Homo sapiens phytanoil-CoA alpha
hydroxylase protein.
Length = 338
Score = 139 bits (336), Expect = 9e-33
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Frame = +1
Query: 121 NYRLSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQIC-KGIVDSPVMIVKEQALFEK 297
N L+ EQ+ FY ENG+LVIK L+ + ++ F +IC K + + ++++ + +
Sbjct: 50 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKS 109
Query: 298 NLKP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDDITAIHSMFINKPPG----T 462
P E+ I K+Q+ D Y P +L + F G +I A+H+M INKPP T
Sbjct: 110 EYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 463 ARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP--EA 636
+RHP HQDL YFP RP D I+ +WTA++H++++NGCL V+P +HK L PH D P E
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGS-LKPH-DYPKWEG 227
Query: 637 G--KLYHG 654
G K++HG
Sbjct: 228 GVNKMFHG 235
>AF023462-1|AAB81834.1| 338|Homo sapiens peroxisomal phytanoyl-CoA
alpha-hydroxylase protein.
Length = 338
Score = 139 bits (336), Expect = 9e-33
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Frame = +1
Query: 121 NYRLSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQIC-KGIVDSPVMIVKEQALFEK 297
N L+ EQ+ FY ENG+LVIK L+ + ++ F +IC K + + ++++ + +
Sbjct: 50 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKS 109
Query: 298 NLKP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDDITAIHSMFINKPPG----T 462
P E+ I K+Q+ D Y P +L + F G +I A+H+M INKPP T
Sbjct: 110 EYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT 169
Query: 463 ARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP--EA 636
+RHP HQDL YFP RP D I+ +WTA++H++++NGCL V+P +HK L PH D P E
Sbjct: 170 SRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGS-LKPH-DYPKWEG 227
Query: 637 G--KLYHG 654
G K++HG
Sbjct: 228 GVNKMFHG 235
>AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 321
Score = 137 bits (332), Expect = 3e-32
Identities = 75/190 (39%), Positives = 112/190 (58%), Gaps = 12/190 (6%)
Frame = +1
Query: 121 NYRLSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQIC-KGIVDSPVMIVKEQALFEK 297
N L+ EQ+ FY ENG+LVIK L+ + ++ F +IC K + + ++++ + +
Sbjct: 31 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKS 90
Query: 298 NLKP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDDITAIHSMFINKPPG----- 459
P E+ I K+Q+ D Y P +L + F G +I A+H+M INKPP
Sbjct: 91 EYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGNCK 150
Query: 460 -TARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP-- 630
T+RHP HQDL YFP RP D I+ +WTA++H++++NGCL V+P +HK L PH D P
Sbjct: 151 KTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGS-LKPH-DYPKW 208
Query: 631 EAG--KLYHG 654
E G K++HG
Sbjct: 209 EGGVNKMFHG 218
>AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 296
Score = 137 bits (332), Expect = 3e-32
Identities = 75/190 (39%), Positives = 112/190 (58%), Gaps = 12/190 (6%)
Frame = +1
Query: 121 NYRLSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQIC-KGIVDSPVMIVKEQALFEK 297
N L+ EQ+ FY ENG+LVIK L+ + ++ F +IC K + + ++++ + +
Sbjct: 68 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKS 127
Query: 298 NLKP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDDITAIHSMFINKPPG----- 459
P E+ I K+Q+ D Y P +L + F G +I A+H+M INKPP
Sbjct: 128 EYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGNCK 187
Query: 460 -TARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP-- 630
T+RHP HQDL YFP RP D I+ +WTA++H++++NGCL V+P +HK L PH D P
Sbjct: 188 KTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGS-LKPH-DYPKW 245
Query: 631 EAG--KLYHG 654
E G K++HG
Sbjct: 246 EGGVNKMFHG 255
>BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein.
Length = 291
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Frame = +1
Query: 307 PEEYINKLQEILY--DDVFMTYGEHPRLLDVISQFIGDDI-TAIHSMFINKPPGTARH-P 474
PE+ INK+ L+ D VF + H + +++ +G + + SM+I K P
Sbjct: 96 PEKSINKIGHALHAHDPVFKSI-THSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVS 154
Query: 475 PHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDI 606
PHQD + P+ +++G W AV+ +NGCL+ IP SH +
Sbjct: 155 PHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGV 198
>AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 291
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Frame = +1
Query: 307 PEEYINKLQEILY--DDVFMTYGEHPRLLDVISQFIGDDI-TAIHSMFINKPPGTARH-P 474
PE+ INK+ L+ D VF + H + +++ +G + + SM+I K P
Sbjct: 96 PEKSINKIGHALHAHDPVFKSI-THSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVS 154
Query: 475 PHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDI 606
PHQD + P+ +++G W AV+ +NGCL+ IP SH +
Sbjct: 155 PHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGV 198
>BC051300-1|AAH51300.1| 270|Homo sapiens PHYHD1 protein protein.
Length = 270
Score = 50.8 bits (116), Expect = 4e-06
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 430 HSMFINKPPGTARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDI 606
HS + +P PHQD + P+ +++G W AV+ +NGCL+ IP SH +
Sbjct: 119 HSFKVQQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGV 177
>AL672142-5|CAI10841.1| 255|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 255
Score = 50.8 bits (116), Expect = 4e-06
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 430 HSMFINKPPGTARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDI 606
HS + +P PHQD + P+ +++G W AV+ +NGCL+ IP SH +
Sbjct: 119 HSFKVQQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGV 177
>AL672142-4|CAI10840.1| 177|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 177
Score = 38.7 bits (86), Expect = 0.018
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +1
Query: 307 PEEYINKLQEILY--DDVFMTYGEHPRLLDVISQFIGDDI-TAIHSMFINKPPGTARH-P 474
PE+ INK+ L+ D VF + H + +++ +G + + SM+I K P
Sbjct: 96 PEKSINKIGHALHAHDPVFKSI-THSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVS 154
Query: 475 PHQDLFYFPIRPVDKIIGSWTAV 543
PHQD + P+ +++G W AV
Sbjct: 155 PHQDASFLYTEPLGRVLGVWIAV 177
>AY035864-1|AAK62026.1| 1709|Homo sapiens GW182 autoantigen protein.
Length = 1709
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = -2
Query: 632 SGTSPWGYKISCL*DFGMTYRQPLSLLTWSTAVHEPMILSTGLIGK*NKSWCGGCLAVPG 453
+GTS WG I +G S TW ++ P LS WCG + +PG
Sbjct: 823 NGTSAWGKPIDSGPSWGEPIAAASSTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPG 882
>AJ492221-1|CAD37348.1| 1962|Homo sapiens EDIE protein protein.
Length = 1962
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = -2
Query: 632 SGTSPWGYKISCL*DFGMTYRQPLSLLTWSTAVHEPMILSTGLIGK*NKSWCGGCLAVPG 453
+GTS WG I +G S TW ++ P LS WCG + +PG
Sbjct: 1076 NGTSAWGKPIDSGPSWGEPIAAASSTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPG 1135
>AB040893-1|BAA95984.1| 1400|Homo sapiens KIAA1460 protein protein.
Length = 1400
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = -2
Query: 632 SGTSPWGYKISCL*DFGMTYRQPLSLLTWSTAVHEPMILSTGLIGK*NKSWCGGCLAVPG 453
+GTS WG I +G S TW ++ P LS WCG + +PG
Sbjct: 514 NGTSAWGKPIDSGPSWGEPIAAASSTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPG 573
>AJ628420-1|CAF31524.1| 598|Homo sapiens type II hair keratin 4
protein.
Length = 598
Score = 31.5 bits (68), Expect = 2.7
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +1
Query: 196 FTSLYSYKQRFLQICKGIVDSPVMIVKEQALFEKNLKP--EEYINKLQ---EILYDDVFM 360
FTS K RFL+ ++++ ++EQ NL+P E YI L+ E+L D
Sbjct: 174 FTSFID-KVRFLEQQNKLLETKWSFLQEQKCIRSNLEPLFESYITNLRRQLEVLVSDQAR 232
Query: 361 TYGEHPRLLDVISQF 405
E L DV+ F
Sbjct: 233 LQAERNHLQDVLEGF 247
>Y19209-1|CAB76829.1| 600|Homo sapiens type II hair keratin 3
protein.
Length = 600
Score = 31.1 bits (67), Expect = 3.6
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 IKELIDFTSLYSYKQRFLQICKGIVDSPVMIVKEQALFEKNLKP--EEYINKLQ---EIL 342
IK L + + + K RFL+ ++++ ++EQ NL+P E YI L+ E+L
Sbjct: 169 IKTLNNKFASFIDKVRFLEQQNKLLETKWSFLQEQKCIRSNLEPLFESYITNLRRQLEVL 228
Query: 343 YDDVFMTYGEHPRLLDVISQF 405
D E L DV+ F
Sbjct: 229 VSDQARLQAERNHLQDVLEGF 249
>BC069647-1|AAH69647.1| 600|Homo sapiens keratin 84 protein.
Length = 600
Score = 31.1 bits (67), Expect = 3.6
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +1
Query: 178 IKELIDFTSLYSYKQRFLQICKGIVDSPVMIVKEQALFEKNLKP--EEYINKLQ---EIL 342
IK L + + + K RFL+ ++++ ++EQ NL+P E YI L+ E+L
Sbjct: 169 IKTLNNKFASFIDKVRFLEQQNKLLETKWSFLQEQKCIRSNLEPLFESYITNLRRQLEVL 228
Query: 343 YDDVFMTYGEHPRLLDVISQF 405
D E L DV+ F
Sbjct: 229 VSDQARLQAERNHLQDVLEGF 249
>AY351902-1|AAQ81291.1| 1071|Homo sapiens testis specific IQ motif
containing GTPase activating protein 2 protein.
Length = 1071
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/63 (22%), Positives = 33/63 (52%)
Frame = +1
Query: 145 KSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSPVMIVKEQALFEKNLKPEEYIN 324
+S +++ +L KE+ F Y ++ ++ + +D+ +VK Q+ F + Y++
Sbjct: 179 ESCFYKESWLTGKEIEAFWKGYKQRKEYMHRRQTFIDNTDSVVKIQSWFRMATARKSYLS 238
Query: 325 KLQ 333
+LQ
Sbjct: 239 RLQ 241
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,315,980
Number of Sequences: 237096
Number of extensions: 2262685
Number of successful extensions: 3935
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3919
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -